RNA–Protein interactions for RNA: ENST00000494610.1

CSNK1E-212, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-212ENST00000494610 RNF216Q9NWF9 866 aaPredicted RBP13.15□□□□□ -0.3
CSNK1E-212ENST00000494610 MTMR6Q9Y217 621 aa13.15□□□□□ -0.3
CSNK1E-212ENST00000494610 ESYT2A0FGR8 921 aa13.14□□□□□ -0.31
CSNK1E-212ENST00000494610 GOLGA6L22H0YM25 854 aa13.14□□□□□ -0.31
CSNK1E-212ENST00000494610 DDHD2O94830 711 aa13.14□□□□□ -0.31
CSNK1E-212ENST00000494610 STBD1O95210 358 aa13.14□□□□□ -0.31
CSNK1E-212ENST00000494610 PTMSP20962 102 aa13.14□□□□□ -0.31
CSNK1E-212ENST00000494610 GNA11P29992 359 aa13.14□□□□□ -0.31
CSNK1E-212ENST00000494610 PTPN14Q15678 1187 aa13.14□□□□□ -0.31
CSNK1E-212ENST00000494610 ATL3Q6DD88 541 aa13.14□□□□□ -0.31
CSNK1E-212ENST00000494610 TAS1R1Q7RTX1 841 aa13.14□□□□□ -0.31
CSNK1E-212ENST00000494610 CABP7Q86V35 215 aa13.14□□□□□ -0.31
CSNK1E-212ENST00000494610 SMAP1Q8IYB5 467 aaPredicted RBP13.14□□□□□ -0.31
CSNK1E-212ENST00000494610 NKD2Q969F2 451 aaPredicted RBP13.14□□□□□ -0.31
CSNK1E-212ENST00000494610 CEP89Q96ST8 783 aa13.14□□□□□ -0.31
CSNK1E-212ENST00000494610 IRF2BPLQ9H1B7 796 aa13.14□□□□□ -0.31
CSNK1E-212ENST00000494610 TCEAL9Q9UHQ7 104 aa13.14□□□□□ -0.31
CSNK1E-212ENST00000494610 COL4A3Q01955 1670 aa13.13□□□□□ -0.31
CSNK1E-212ENST00000494610 F8W810 466 aa13.13□□□□□ -0.31
CSNK1E-212ENST00000494610 C2CD2LO14523 706 aa13.13□□□□□ -0.31
CSNK1E-212ENST00000494610 OFD1O75665 1012 aa13.13□□□□□ -0.31
CSNK1E-212ENST00000494610 CFHP08603 1231 aa13.13□□□□□ -0.31
CSNK1E-212ENST00000494610 CNPP09543 421 aaKnown RBP13.13□□□□□ -0.31
CSNK1E-212ENST00000494610 CTSAP10619 480 aa13.13□□□□□ -0.31
CSNK1E-212ENST00000494610 TMOD1P28289 359 aa13.13□□□□□ -0.31
CSNK1E-212ENST00000494610 KRT2P35908 639 aa13.13□□□□□ -0.31
CSNK1E-212ENST00000494610 TBC1D8BQ0IIM8 1120 aa13.13□□□□□ -0.31
CSNK1E-212ENST00000494610 ANGPT1Q15389 498 aa13.13□□□□□ -0.31
CSNK1E-212ENST00000494610 TARBP2Q15633 366 aaKnown RBP13.13□□□□□ -0.31
CSNK1E-212ENST00000494610 MCTP2Q6DN12 878 aa13.13□□□□□ -0.31
CSNK1E-212ENST00000494610 MCTP1Q6DN14 999 aa13.13□□□□□ -0.31
CSNK1E-212ENST00000494610 GPR149Q86SP6 731 aa13.13□□□□□ -0.31
CSNK1E-212ENST00000494610 DDX53Q86TM3 631 aaKnown RBP13.13□□□□□ -0.31
CSNK1E-212ENST00000494610 SIX5Q8N196 739 aa13.13□□□□□ -0.31
CSNK1E-212ENST00000494610 REXO1Q8N1G1 1221 aaKnown RBP13.13□□□□□ -0.31
CSNK1E-212ENST00000494610 ZNF579Q8NAF0 562 aaKnown RBP13.13□□□□□ -0.31
CSNK1E-212ENST00000494610 TMEM87AQ8NBN3 555 aa13.13□□□□□ -0.31
CSNK1E-212ENST00000494610 DAGLBQ8NCG7 672 aa13.13□□□□□ -0.31
CSNK1E-212ENST00000494610 KLHL5Q96PQ7 755 aa13.13□□□□□ -0.31
CSNK1E-212ENST00000494610 ZMYND12Q9H0C1 365 aa13.13□□□□□ -0.31
CSNK1E-212ENST00000494610 FOXP1Q9H334 677 aaPredicted RBP13.13□□□□□ -0.31
CSNK1E-212ENST00000494610 KCNK12Q9HB15 430 aa13.13□□□□□ -0.31
CSNK1E-212ENST00000494610 C6orf50Q9HD87 102 aa13.13□□□□□ -0.31
CSNK1E-212ENST00000494610 CYP26B1Q9NR63 512 aa13.13□□□□□ -0.31
CSNK1E-212ENST00000494610 NRBP2Q9NSY0 501 aa13.13□□□□□ -0.31
CSNK1E-212ENST00000494610 SEPT9Q9UHD8 586 aaPredicted RBP13.13□□□□□ -0.31
CSNK1E-212ENST00000494610 CEP131Q9UPN4 1083 aa13.13□□□□□ -0.31
CSNK1E-212ENST00000494610 PIN4Q9Y237 131 aaKnown RBP13.13□□□□□ -0.31
CSNK1E-212ENST00000494610 NCOR2Q9Y618 2525 aa13.13□□□□□ -0.31
CSNK1E-212ENST00000494610 WDR64B1ANS9 1081 aa13.12□□□□□ -0.31
CSNK1E-212ENST00000494610 SPATA31D3P0C874 917 aa13.12□□□□□ -0.31
CSNK1E-212ENST00000494610 AOC1P19801 751 aa13.12□□□□□ -0.31
CSNK1E-212ENST00000494610 ID4P47928 161 aa13.12□□□□□ -0.31
CSNK1E-212ENST00000494610 CLCN5P51795 746 aa13.12□□□□□ -0.31
CSNK1E-212ENST00000494610 NUBP1P53384 320 aa13.12□□□□□ -0.31
CSNK1E-212ENST00000494610 NLRP5P59047 1200 aa13.12□□□□□ -0.31
CSNK1E-212ENST00000494610 SETQ01105 290 aaPredicted RBP13.12□□□□□ -0.31
CSNK1E-212ENST00000494610 NOMO2Q5JPE7 1267 aa13.12□□□□□ -0.31
CSNK1E-212ENST00000494610 PLA2G4FQ68DD2 849 aa13.12□□□□□ -0.31
CSNK1E-212ENST00000494610 TWF2Q6IBS0 349 aaKnown RBP13.12□□□□□ -0.31
CSNK1E-212ENST00000494610 POTEGQ6S5H5 508 aa13.12□□□□□ -0.31
CSNK1E-212ENST00000494610 SPATA31D4Q6ZUB0 917 aa13.12□□□□□ -0.31
CSNK1E-212ENST00000494610 RIN2Q8WYP3 895 aaPredicted RBP13.12□□□□□ -0.31
CSNK1E-212ENST00000494610 ZNF396Q96N95 335 aaPredicted RBP13.12□□□□□ -0.31
CSNK1E-212ENST00000494610 PHF20Q9BVI0 1012 aa13.12□□□□□ -0.31
CSNK1E-212ENST00000494610 MRPL9Q9BYD2 267 aaKnown RBP13.12□□□□□ -0.31
CSNK1E-212ENST00000494610 BMP2KQ9NSY1 1161 aaPredicted RBP13.12□□□□□ -0.31
CSNK1E-212ENST00000494610 VPS54Q9P1Q0 977 aa13.12□□□□□ -0.31
CSNK1E-212ENST00000494610 R4GN57 208 aa13.12□□□□□ -0.31
CSNK1E-212ENST00000494610 CEP250Q9BV73 2442 aa13.11□□□□□ -0.31
CSNK1E-212ENST00000494610 KRBA1A5PL33 1030 aa13.11□□□□□ -0.31
CSNK1E-212ENST00000494610 SPDYE4A6NLX3 237 aa13.11□□□□□ -0.31
CSNK1E-212ENST00000494610 DTNBO60941 627 aa13.11□□□□□ -0.31
CSNK1E-212ENST00000494610 TDP2O95551 362 aa13.11□□□□□ -0.31
CSNK1E-212ENST00000494610 POMCP01189 267 aa13.11□□□□□ -0.31
CSNK1E-212ENST00000494610 KLRC2P26717 231 aa13.11□□□□□ -0.31
CSNK1E-212ENST00000494610 CIITAP33076 1130 aa13.11□□□□□ -0.31
CSNK1E-212ENST00000494610 CLCN4P51793 760 aa13.11□□□□□ -0.31
CSNK1E-212ENST00000494610 FOSBP53539 338 aa13.11□□□□□ -0.31
CSNK1E-212ENST00000494610 RNASELQ05823 741 aaKnown RBP13.11□□□□□ -0.31
CSNK1E-212ENST00000494610 TDGQ13569 410 aa13.11□□□□□ -0.31
CSNK1E-212ENST00000494610 AGMOQ6ZNB7 445 aa13.11□□□□□ -0.31
CSNK1E-212ENST00000494610 CLEC17AQ6ZS10 378 aa13.11□□□□□ -0.31
CSNK1E-212ENST00000494610 RHPN2Q8IUC4 686 aa13.11□□□□□ -0.31
CSNK1E-212ENST00000494610 DIS3L2Q8IYB7 885 aaKnown RBP13.11□□□□□ -0.31
CSNK1E-212ENST00000494610 CCDC105Q8IYK2 499 aa13.11□□□□□ -0.31
CSNK1E-212ENST00000494610 DTWD2Q8NBA8 298 aa13.11□□□□□ -0.31
CSNK1E-212ENST00000494610 SLC5A5Q92911 643 aa13.11□□□□□ -0.31
CSNK1E-212ENST00000494610 FAM167AQ96KS9 214 aa13.11□□□□□ -0.31
CSNK1E-212ENST00000494610 B3GALT6Q96L58 329 aa13.11□□□□□ -0.31
CSNK1E-212ENST00000494610 NLRP4Q96MN2 994 aa13.11□□□□□ -0.31
CSNK1E-212ENST00000494610 GCOM2Q9BZD3 368 aaPredicted RBP13.11□□□□□ -0.31
CSNK1E-212ENST00000494610 FAM105AQ9NUU6 356 aa13.11□□□□□ -0.31
CSNK1E-212ENST00000494610 DZANK1Q9NVP4 752 aa13.11□□□□□ -0.31
CSNK1E-212ENST00000494610 SUCLA2Q9P2R7 463 aaPredicted RBP13.11□□□□□ -0.31
CSNK1E-212ENST00000494610 FBXL21Q9UKT6 434 aa13.11□□□□□ -0.31
CSNK1E-212ENST00000494610 CA14Q9ULX7 337 aa13.11□□□□□ -0.31
CSNK1E-212ENST00000494610 NOL7Q9UMY1 257 aaKnown RBP13.11□□□□□ -0.31
CSNK1E-212ENST00000494610 USTQ9Y2C2 406 aa13.11□□□□□ -0.31
CSNK1E-212ENST00000494610 IRAK3Q9Y616 596 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms