RNA–Protein interactions for RNA: ENST00000493648.1

TOP3A-207, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 503 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-207ENST00000493648 TMEM132AQ24JP5 1023 aa7.71□□□□□ -1.18
TOP3A-207ENST00000493648 AAK1Q2M2I8 961 aa7.71□□□□□ -1.18
TOP3A-207ENST00000493648 LONRF3Q496Y0 759 aa7.71□□□□□ -1.18
TOP3A-207ENST00000493648 TIGD5Q53EQ6 642 aa7.71□□□□□ -1.18
TOP3A-207ENST00000493648 UBXN11Q5T124 520 aa7.71□□□□□ -1.18
TOP3A-207ENST00000493648 CDCA2Q69YH5 1023 aaPredicted RBP7.71□□□□□ -1.18
TOP3A-207ENST00000493648 FAM173BQ6P4H8 233 aa7.71□□□□□ -1.18
TOP3A-207ENST00000493648 SLC27A1Q6PCB7 646 aa7.71□□□□□ -1.18
TOP3A-207ENST00000493648 LRRC55Q6ZSA7 311 aa7.71□□□□□ -1.18
TOP3A-207ENST00000493648 C1orf186Q6ZWK4 172 aa7.71□□□□□ -1.18
TOP3A-207ENST00000493648 KCNK18Q7Z418 384 aa7.71□□□□□ -1.18
TOP3A-207ENST00000493648 HACE1Q8IYU2 909 aa7.71□□□□□ -1.18
TOP3A-207ENST00000493648 LRRC43Q8N309 656 aa7.71□□□□□ -1.18
TOP3A-207ENST00000493648 SYT2Q8N9I0 419 aaPredicted RBP7.71□□□□□ -1.18
TOP3A-207ENST00000493648 KLHL23Q8NBE8 558 aa7.71□□□□□ -1.18
TOP3A-207ENST00000493648 COLGALT1Q8NBJ5 622 aa7.71□□□□□ -1.18
TOP3A-207ENST00000493648 SPRYD3Q8NCJ5 442 aa7.71□□□□□ -1.18
TOP3A-207ENST00000493648 SPPL3Q8TCT6 385 aa7.71□□□□□ -1.18
TOP3A-207ENST00000493648 URGCPQ8TCY9 931 aa7.71□□□□□ -1.18
TOP3A-207ENST00000493648 ATXN2LQ8WWM7 1075 aaKnown RBP7.71□□□□□ -1.18
TOP3A-207ENST00000493648 LPPQ93052 612 aa7.71□□□□□ -1.18
TOP3A-207ENST00000493648 HLA-CQ95604 372 aa7.71□□□□□ -1.18
TOP3A-207ENST00000493648 CPB2Q96IY4 423 aa7.71□□□□□ -1.18
TOP3A-207ENST00000493648 PRIMPOLQ96LW4 560 aa7.71□□□□□ -1.18
TOP3A-207ENST00000493648 DRC1Q96MC2 740 aa7.71□□□□□ -1.18
TOP3A-207ENST00000493648 PNMA5Q96PV4 448 aa7.71□□□□□ -1.18
TOP3A-207ENST00000493648 CCSER1Q9C0I3 900 aa7.71□□□□□ -1.18
TOP3A-207ENST00000493648 CSRNP2Q9H175 543 aa7.71□□□□□ -1.18
TOP3A-207ENST00000493648 FZD8Q9H461 694 aa7.71□□□□□ -1.18
TOP3A-207ENST00000493648 CWH43Q9H720 699 aa7.71□□□□□ -1.18
TOP3A-207ENST00000493648 C17orf75Q9HAS0 396 aa7.71□□□□□ -1.18
TOP3A-207ENST00000493648 POLD4Q9HCU8 107 aa7.71□□□□□ -1.18
TOP3A-207ENST00000493648 ALG13Q9NP73 1137 aaKnown RBP7.71□□□□□ -1.18
TOP3A-207ENST00000493648 RNF19AQ9NV58 838 aa7.71□□□□□ -1.18
TOP3A-207ENST00000493648 KCND2Q9NZV8 630 aa7.71□□□□□ -1.18
TOP3A-207ENST00000493648 PUF60Q9UHX1 559 aaKnown RBP7.71□□□□□ -1.18
TOP3A-207ENST00000493648 COG5Q9UP83 839 aa7.71□□□□□ -1.18
TOP3A-207ENST00000493648 RBM19Q9Y4C8 960 aaKnown RBP7.71□□□□□ -1.18
TOP3A-207ENST00000493648 SRPRBQ9Y5M8 271 aaKnown RBP7.71□□□□□ -1.18
TOP3A-207ENST00000493648 PHLPP2Q6ZVD8 1323 aa7.71□□□□□ -1.18
TOP3A-207ENST00000493648 CNTNAP2Q9UHC6 1331 aa7.71□□□□□ -1.18
TOP3A-207ENST00000493648 PRRC2BQ5JSZ5 2229 aaKnown RBP7.7□□□□□ -1.18
TOP3A-207ENST00000493648 ACKR2O00590 384 aa7.7□□□□□ -1.18
TOP3A-207ENST00000493648 N4BP3O15049 544 aa7.7□□□□□ -1.18
TOP3A-207ENST00000493648 GRM6O15303 877 aa7.7□□□□□ -1.18
TOP3A-207ENST00000493648 NCK2O43639 380 aa7.7□□□□□ -1.18
TOP3A-207ENST00000493648 HIP1RO75146 1068 aa7.7□□□□□ -1.18
TOP3A-207ENST00000493648 OFD1O75665 1012 aa7.7□□□□□ -1.18
TOP3A-207ENST00000493648 FGF18O76093 207 aa7.7□□□□□ -1.18
TOP3A-207ENST00000493648 ITGB1P05556 798 aa7.7□□□□□ -1.18
TOP3A-207ENST00000493648 PRKCBP05771 671 aa7.7□□□□□ -1.18
TOP3A-207ENST00000493648 ZSCAN22P10073 491 aaPredicted RBP7.7□□□□□ -1.18
TOP3A-207ENST00000493648 ATF7P17544 494 aaPredicted RBP7.7□□□□□ -1.18
TOP3A-207ENST00000493648 LIG1P18858 919 aa7.7□□□□□ -1.18
TOP3A-207ENST00000493648 DDIT3P35638 169 aa7.7□□□□□ -1.18
TOP3A-207ENST00000493648 PPM1AP35813 382 aa7.7□□□□□ -1.18
TOP3A-207ENST00000493648 SMTNP53814 917 aa7.7□□□□□ -1.18
TOP3A-207ENST00000493648 SLC12A3P55017 1021 aa7.7□□□□□ -1.18
TOP3A-207ENST00000493648 PEX3P56589 373 aa7.7□□□□□ -1.18
TOP3A-207ENST00000493648 MRPS5P82675 430 aaKnown RBP7.7□□□□□ -1.18
TOP3A-207ENST00000493648 RNASELQ05823 741 aaKnown RBP7.7□□□□□ -1.18
TOP3A-207ENST00000493648 DMP1Q13316 513 aaPredicted RBP7.7□□□□□ -1.18
TOP3A-207ENST00000493648 STK38Q15208 465 aa7.7□□□□□ -1.18
TOP3A-207ENST00000493648 AMHR2Q16671 573 aa7.7□□□□□ -1.18
TOP3A-207ENST00000493648 TMEM119Q4V9L6 283 aa7.7□□□□□ -1.18
TOP3A-207ENST00000493648 NOMO2Q5JPE7 1267 aa7.7□□□□□ -1.18
TOP3A-207ENST00000493648 CLLU1OSQ5K130 101 aa7.7□□□□□ -1.18
TOP3A-207ENST00000493648 PDE12Q6L8Q7 609 aaKnown RBP7.7□□□□□ -1.18
TOP3A-207ENST00000493648 KCNT2Q6UVM3 1135 aa7.7□□□□□ -1.18
TOP3A-207ENST00000493648 APBB1IPQ7Z5R6 666 aaPredicted RBP7.7□□□□□ -1.18
TOP3A-207ENST00000493648 THNSL1Q8IYQ7 743 aa7.7□□□□□ -1.18
TOP3A-207ENST00000493648 MICAL1Q8TDZ2 1067 aa7.7□□□□□ -1.18
TOP3A-207ENST00000493648 POF1BQ8WVV4 589 aa7.7□□□□□ -1.18
TOP3A-207ENST00000493648 BSNDQ8WZ55 320 aa7.7□□□□□ -1.18
TOP3A-207ENST00000493648 SYMPKQ92797 1274 aaKnown RBP7.7□□□□□ -1.18
TOP3A-207ENST00000493648 PPP2R3CQ969Q6 453 aa7.7□□□□□ -1.18
TOP3A-207ENST00000493648 ZNF558Q96NG5 402 aa7.7□□□□□ -1.18
TOP3A-207ENST00000493648 FAM193BQ96PV7 902 aaPredicted RBP7.7□□□□□ -1.18
TOP3A-207ENST00000493648 USP28Q96RU2 1077 aa7.7□□□□□ -1.18
TOP3A-207ENST00000493648 ADPGKQ9BRR6 497 aa7.7□□□□□ -1.18
TOP3A-207ENST00000493648 NTPCRQ9BSD7 190 aaKnown RBP7.7□□□□□ -1.18
TOP3A-207ENST00000493648 NSUN3Q9H649 340 aaKnown RBP7.7□□□□□ -1.18
TOP3A-207ENST00000493648 RSAD1Q9HA92 442 aa7.7□□□□□ -1.18
TOP3A-207ENST00000493648 PRDM6Q9NQX0 595 aa7.7□□□□□ -1.18
TOP3A-207ENST00000493648 SPG21Q9NZD8 308 aa7.7□□□□□ -1.18
TOP3A-207ENST00000493648 THEGQ9P2T0 379 aa7.7□□□□□ -1.18
TOP3A-207ENST00000493648 TFIP11Q9UBB9 837 aaKnown RBP7.7□□□□□ -1.18
TOP3A-207ENST00000493648 FBXO2Q9UK22 296 aaPredicted RBP7.7□□□□□ -1.18
TOP3A-207ENST00000493648 INPP5FQ9Y2H2 1132 aa7.7□□□□□ -1.18
TOP3A-207ENST00000493648 IPPQ9Y573 584 aa7.7□□□□□ -1.18
TOP3A-207ENST00000493648 MORC2Q9Y6X9 1032 aaPredicted RBP7.7□□□□□ -1.18
TOP3A-207ENST00000493648 CHD9Q3L8U1 2897 aa7.69□□□□□ -1.18
TOP3A-207ENST00000493648 SFI1A8K8P3 1242 aa7.69□□□□□ -1.18
TOP3A-207ENST00000493648 H0YCG3 227 aa7.69□□□□□ -1.18
TOP3A-207ENST00000493648 SPTLC2O15270 562 aa7.69□□□□□ -1.18
TOP3A-207ENST00000493648 B4GALT5O43286 388 aa7.69□□□□□ -1.18
TOP3A-207ENST00000493648 NR1I2O75469 434 aa7.69□□□□□ -1.18
TOP3A-207ENST00000493648 NPTXRO95502 500 aa7.69□□□□□ -1.18
TOP3A-207ENST00000493648 F13A1P00488 732 aa7.69□□□□□ -1.18
TOP3A-207ENST00000493648 ALDH2P05091 517 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms