RNA–Protein interactions for RNA: ENST00000492150.1

CACNA1C-228, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 2

Gene CACNA1C, Length 819 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-228ENST00000492150 CASD1Q96PB1 797 aa13.28□□□□□ -0.28
CACNA1C-228ENST00000492150 PPP1R16BQ96T49 567 aa13.28□□□□□ -0.28
CACNA1C-228ENST00000492150 SCNM1Q9BWG6 230 aa13.28□□□□□ -0.28
CACNA1C-228ENST00000492150 ANO3Q9BYT9 981 aa13.28□□□□□ -0.28
CACNA1C-228ENST00000492150 RIC8AQ9NPQ8 531 aa13.28□□□□□ -0.28
CACNA1C-228ENST00000492150 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.28□□□□□ -0.28
CACNA1C-228ENST00000492150 NUMBLQ9Y6R0 609 aa13.28□□□□□ -0.28
CACNA1C-228ENST00000492150 EVPLQ92817 2033 aa13.28□□□□□ -0.28
CACNA1C-228ENST00000492150 SPAG17Q6Q759 2223 aa13.28□□□□□ -0.28
CACNA1C-228ENST00000492150 CARNS1A5YM72 827 aa13.27□□□□□ -0.29
CACNA1C-228ENST00000492150 SPDYE4A6NLX3 237 aa13.27□□□□□ -0.29
CACNA1C-228ENST00000492150 DDX39AO00148 427 aaKnown RBP13.27□□□□□ -0.29
CACNA1C-228ENST00000492150 BACH1O14867 736 aa13.27□□□□□ -0.29
CACNA1C-228ENST00000492150 DHX15O43143 795 aaKnown RBP13.27□□□□□ -0.29
CACNA1C-228ENST00000492150 GPR32O75388 356 aa13.27□□□□□ -0.29
CACNA1C-228ENST00000492150 C22orf31O95567 290 aa13.27□□□□□ -0.29
CACNA1C-228ENST00000492150 FOSP01100 380 aaPredicted RBP13.27□□□□□ -0.29
CACNA1C-228ENST00000492150 ZNF806P0C7X5 589 aa13.27□□□□□ -0.29
CACNA1C-228ENST00000492150 SPINK2P20155 84 aa13.27□□□□□ -0.29
CACNA1C-228ENST00000492150 CA8P35219 290 aa13.27□□□□□ -0.29
CACNA1C-228ENST00000492150 PBX3P40426 434 aa13.27□□□□□ -0.29
CACNA1C-228ENST00000492150 NOVA1P51513 510 aaKnown RBP13.27□□□□□ -0.29
CACNA1C-228ENST00000492150 CLCN4P51793 760 aa13.27□□□□□ -0.29
CACNA1C-228ENST00000492150 CRYBB1P53674 252 aaPredicted RBP13.27□□□□□ -0.29
CACNA1C-228ENST00000492150 GPC5P78333 572 aa13.27□□□□□ -0.29
CACNA1C-228ENST00000492150 SLC44A4Q53GD3 710 aa13.27□□□□□ -0.29
CACNA1C-228ENST00000492150 FAM160B1Q5W0V3 765 aa13.27□□□□□ -0.29
CACNA1C-228ENST00000492150 PROSER1Q86XN7 944 aa13.27□□□□□ -0.29
CACNA1C-228ENST00000492150 VPS52Q8N1B4 723 aa13.27□□□□□ -0.29
CACNA1C-228ENST00000492150 OSMRQ99650 979 aa13.27□□□□□ -0.29
CACNA1C-228ENST00000492150 LRRC2Q9BYS8 371 aa13.27□□□□□ -0.29
CACNA1C-228ENST00000492150 NEUROG3Q9Y4Z2 214 aa13.27□□□□□ -0.29
CACNA1C-228ENST00000492150 SLC12A7Q9Y666 1083 aa13.27□□□□□ -0.29
CACNA1C-228ENST00000492150 COL1A2P08123 1366 aa13.27□□□□□ -0.29
CACNA1C-228ENST00000492150 FREM2Q5SZK8 3169 aa13.27□□□□□ -0.29
CACNA1C-228ENST00000492150 VTNP04004 478 aa13.26□□□□□ -0.29
CACNA1C-228ENST00000492150 TARSP26639 723 aaKnown RBP13.26□□□□□ -0.29
CACNA1C-228ENST00000492150 SREBF1P36956 1147 aa13.26□□□□□ -0.29
CACNA1C-228ENST00000492150 NAPAP54920 295 aa13.26□□□□□ -0.29
CACNA1C-228ENST00000492150 PFKPQ01813 784 aa13.26□□□□□ -0.29
CACNA1C-228ENST00000492150 FUT2Q10981 343 aa13.26□□□□□ -0.29
CACNA1C-228ENST00000492150 MTAPQ13126 283 aa13.26□□□□□ -0.29
CACNA1C-228ENST00000492150 FZD5Q13467 585 aa13.26□□□□□ -0.29
CACNA1C-228ENST00000492150 CCDC6Q16204 474 aa13.26□□□□□ -0.29
CACNA1C-228ENST00000492150 SWSAP1Q6NVH7 229 aa13.26□□□□□ -0.29
CACNA1C-228ENST00000492150 PDXDC2PQ6P474 469 aa13.26□□□□□ -0.29
CACNA1C-228ENST00000492150 TEX2Q8IWB9 1127 aa13.26□□□□□ -0.29
CACNA1C-228ENST00000492150 CNTNAP5Q8WYK1 1306 aa13.26□□□□□ -0.29
CACNA1C-228ENST00000492150 TMEM169Q96HH4 297 aa13.26□□□□□ -0.29
CACNA1C-228ENST00000492150 ZNF302Q9NR11 478 aa13.26□□□□□ -0.29
CACNA1C-228ENST00000492150 ZFP37Q9Y6Q3 630 aaPredicted RBP13.26□□□□□ -0.29
CACNA1C-228ENST00000492150 SLC27A2O14975 620 aa13.25□□□□□ -0.29
CACNA1C-228ENST00000492150 CLK2P49760 499 aaKnown RBP13.25□□□□□ -0.29
CACNA1C-228ENST00000492150 C19orf57Q0VDD7 668 aa13.25□□□□□ -0.29
CACNA1C-228ENST00000492150 PPP1R18Q6NYC8 613 aa13.25□□□□□ -0.29
CACNA1C-228ENST00000492150 NIPA1Q7RTP0 329 aa13.25□□□□□ -0.29
CACNA1C-228ENST00000492150 SGMS1Q86VZ5 419 aa13.25□□□□□ -0.29
CACNA1C-228ENST00000492150 MICU3Q86XE3 530 aa13.25□□□□□ -0.29
CACNA1C-228ENST00000492150 LSG1Q9H089 658 aaKnown RBP13.25□□□□□ -0.29
CACNA1C-228ENST00000492150 CHRDQ9H2X0 955 aa13.25□□□□□ -0.29
CACNA1C-228ENST00000492150 FAM217BQ9NTX9 383 aaPredicted RBP13.25□□□□□ -0.29
CACNA1C-228ENST00000492150 MAFBQ9Y5Q3 323 aaPredicted RBP13.25□□□□□ -0.29
CACNA1C-228ENST00000492150 MTCL1Q9Y4B5 1905 aaKnown RBP13.25□□□□□ -0.29
CACNA1C-228ENST00000492150 TICRRQ7Z2Z1 1910 aa13.24□□□□□ -0.29
CACNA1C-228ENST00000492150 IGLV3-22A0A075B6J6 115 aa13.24□□□□□ -0.29
CACNA1C-228ENST00000492150 FAM86B1E9PN63 330 aa13.24□□□□□ -0.29
CACNA1C-228ENST00000492150 HRO43593 1189 aa13.24□□□□□ -0.29
CACNA1C-228ENST00000492150 FAM86B2P0C5J1 330 aa13.24□□□□□ -0.29
CACNA1C-228ENST00000492150 NCLP19338 710 aaKnown RBP13.24□□□□□ -0.29
CACNA1C-228ENST00000492150 ZNF76P36508 570 aa13.24□□□□□ -0.29
CACNA1C-228ENST00000492150 ADCY7P51828 1080 aa13.24□□□□□ -0.29
CACNA1C-228ENST00000492150 SF3A2Q15428 464 aaKnown RBP13.24□□□□□ -0.29
CACNA1C-228ENST00000492150 CLLU1OSQ5K130 101 aa13.24□□□□□ -0.29
CACNA1C-228ENST00000492150 MIS18BP1Q6P0N0 1132 aa13.24□□□□□ -0.29
CACNA1C-228ENST00000492150 DDX53Q86TM3 631 aaKnown RBP13.24□□□□□ -0.29
CACNA1C-228ENST00000492150 PLA2G4DQ86XP0 818 aa13.24□□□□□ -0.29
CACNA1C-228ENST00000492150 ECHDC2Q86YB7 292 aa13.24□□□□□ -0.29
CACNA1C-228ENST00000492150 METTL13Q8N6R0 699 aa13.24□□□□□ -0.29
CACNA1C-228ENST00000492150 CRYGNQ8WXF5 182 aa13.24□□□□□ -0.29
CACNA1C-228ENST00000492150 AUTS2Q8WXX7 1259 aa13.24□□□□□ -0.29
CACNA1C-228ENST00000492150 ADAMTS10Q9H324 1103 aa13.24□□□□□ -0.29
CACNA1C-228ENST00000492150 MSRB2Q9Y3D2 182 aa13.24□□□□□ -0.29
CACNA1C-228ENST00000492150 SMCO2A6NFE2 343 aa13.23□□□□□ -0.29
CACNA1C-228ENST00000492150 TOP3BO95985 862 aaKnown RBP13.23□□□□□ -0.29
CACNA1C-228ENST00000492150 CAPNS1P04632 268 aa13.23□□□□□ -0.29
CACNA1C-228ENST00000492150 CCR3P51677 355 aa13.23□□□□□ -0.29
CACNA1C-228ENST00000492150 CLCN3P51790 818 aa13.23□□□□□ -0.29
CACNA1C-228ENST00000492150 NLRP11P59045 1033 aaKnown RBP13.23□□□□□ -0.29
CACNA1C-228ENST00000492150 ADCY1Q08828 1119 aa13.23□□□□□ -0.29
CACNA1C-228ENST00000492150 AP3B2Q13367 1082 aa13.23□□□□□ -0.29
CACNA1C-228ENST00000492150 CREB3L3Q68CJ9 461 aa13.23□□□□□ -0.29
CACNA1C-228ENST00000492150 APOA5Q6Q788 366 aa13.23□□□□□ -0.29
CACNA1C-228ENST00000492150 ABI1Q8IZP0 508 aa13.23□□□□□ -0.29
CACNA1C-228ENST00000492150 FAM160A2Q8N612 972 aaPredicted RBP13.23□□□□□ -0.29
CACNA1C-228ENST00000492150 LINC01465Q8N7H1 131 aa13.23□□□□□ -0.29
CACNA1C-228ENST00000492150 LOXL4Q96JB6 756 aa13.23□□□□□ -0.29
CACNA1C-228ENST00000492150 EMILIN2Q9BXX0 1053 aa13.23□□□□□ -0.29
CACNA1C-228ENST00000492150 BARHL2Q9NY43 387 aa13.23□□□□□ -0.29
CACNA1C-228ENST00000492150 DPP7Q9UHL4 492 aa13.23□□□□□ -0.29
CACNA1C-228ENST00000492150 MRPS17Q9Y2R5 130 aaKnown RBP13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms