RNA–Protein interactions for RNA: ENST00000490056.5

SFXN5-220, Transcript of sideroflexin 5, humanhuman

TSL 1 (best)

Gene SFXN5, Length 906 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN5-220ENST00000490056 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.42■□□□□ 0.54
SFXN5-220ENST00000490056 PVALEFA0A1B0GWK0 134 aa18.42■□□□□ 0.54
SFXN5-220ENST00000490056 ACKR2O00590 384 aa18.42■□□□□ 0.54
SFXN5-220ENST00000490056 RPN1P04843 607 aaKnown RBP18.42■□□□□ 0.54
SFXN5-220ENST00000490056 ARF4P18085 180 aaPredicted RBP18.42■□□□□ 0.54
SFXN5-220ENST00000490056 IBSPP21815 317 aaPredicted RBP18.42■□□□□ 0.54
SFXN5-220ENST00000490056 CASP5P51878 434 aa18.42■□□□□ 0.54
SFXN5-220ENST00000490056 FAM187BQ17R55 369 aa18.42■□□□□ 0.54
SFXN5-220ENST00000490056 KMT5BQ4FZB7 885 aa18.42■□□□□ 0.54
SFXN5-220ENST00000490056 NT5DC1Q5TFE4 455 aa18.42■□□□□ 0.54
SFXN5-220ENST00000490056 PPP4R3CPQ6ZMV5 832 aa18.42■□□□□ 0.54
SFXN5-220ENST00000490056 ZNF720Q7Z2F6 126 aa18.42■□□□□ 0.54
SFXN5-220ENST00000490056 CDR2LQ86X02 465 aaPredicted RBP18.42■□□□□ 0.54
SFXN5-220ENST00000490056 GLIS3Q8NEA6 775 aa18.42■□□□□ 0.54
SFXN5-220ENST00000490056 GPT2Q8TD30 523 aa18.42■□□□□ 0.54
SFXN5-220ENST00000490056 CCDC34Q96HJ3 373 aa18.42■□□□□ 0.54
SFXN5-220ENST00000490056 RNPC3Q96LT9 517 aaKnown RBP18.42■□□□□ 0.54
SFXN5-220ENST00000490056 FTHL17Q9BXU8 183 aa18.42■□□□□ 0.54
SFXN5-220ENST00000490056 PRO3102Q9H379 93 aa18.42■□□□□ 0.54
SFXN5-220ENST00000490056 AGPAT5Q9NUQ2 364 aa18.42■□□□□ 0.54
SFXN5-220ENST00000490056 PHLPP2Q6ZVD8 1323 aa18.42■□□□□ 0.54
SFXN5-220ENST00000490056 BAIAP3O94812 1187 aa18.41■□□□□ 0.54
SFXN5-220ENST00000490056 GCNT3O95395 438 aa18.41■□□□□ 0.54
SFXN5-220ENST00000490056 MYL1P05976 194 aa18.41■□□□□ 0.54
SFXN5-220ENST00000490056 MYBP10242 640 aa18.41■□□□□ 0.54
SFXN5-220ENST00000490056 ZSCAN20P17040 1043 aaPredicted RBP18.41■□□□□ 0.54
SFXN5-220ENST00000490056 WDR5P61964 334 aaKnown RBP18.41■□□□□ 0.54
SFXN5-220ENST00000490056 DEFB103AP81534 67 aa18.41■□□□□ 0.54
SFXN5-220ENST00000490056 EHHADHQ08426 723 aa18.41■□□□□ 0.54
SFXN5-220ENST00000490056 PRPF4BQ13523 1007 aaKnown RBP18.41■□□□□ 0.54
SFXN5-220ENST00000490056 CAMK4Q16566 473 aa18.41■□□□□ 0.54
SFXN5-220ENST00000490056 RASIP1Q5U651 963 aa18.41■□□□□ 0.54
SFXN5-220ENST00000490056 PRPF38BQ5VTL8 546 aaKnown RBP18.41■□□□□ 0.54
SFXN5-220ENST00000490056 TARS2Q9BW92 718 aaKnown RBP18.41■□□□□ 0.54
SFXN5-220ENST00000490056 TSPYL2Q9H2G4 693 aaPredicted RBP18.41■□□□□ 0.54
SFXN5-220ENST00000490056 OLFML3Q9NRN5 406 aa18.41■□□□□ 0.54
SFXN5-220ENST00000490056 EXOC1Q9NV70 894 aa18.41■□□□□ 0.54
SFXN5-220ENST00000490056 TBX20Q9UMR3 447 aa18.41■□□□□ 0.54
SFXN5-220ENST00000490056 H0YCG3 227 aa18.4■□□□□ 0.54
SFXN5-220ENST00000490056 GTF2BQ00403 316 aa18.4■□□□□ 0.54
SFXN5-220ENST00000490056 NCBP1Q09161 790 aaKnown RBP18.4■□□□□ 0.54
SFXN5-220ENST00000490056 PCBP1Q15365 356 aaKnown RBP eCLIP18.4■□□□□ 0.54
SFXN5-220ENST00000490056 TMEM132AQ24JP5 1023 aa18.4■□□□□ 0.54
SFXN5-220ENST00000490056 FAM26FQ5R3K3 315 aa18.4■□□□□ 0.54
SFXN5-220ENST00000490056 EEF1DP3Q658K8 133 aa18.4■□□□□ 0.54
SFXN5-220ENST00000490056 TWF2Q6IBS0 349 aaKnown RBP18.4■□□□□ 0.54
SFXN5-220ENST00000490056 TMCO2Q7Z6W1 182 aaPredicted RBP18.4■□□□□ 0.54
SFXN5-220ENST00000490056 STRA6Q9BX79 667 aa18.4■□□□□ 0.54
SFXN5-220ENST00000490056 IKZF4Q9H2S9 585 aa18.4■□□□□ 0.54
SFXN5-220ENST00000490056 ST6GALNAC4Q9H4F1 302 aa18.4■□□□□ 0.54
SFXN5-220ENST00000490056 SLC39A2Q9NP94 309 aa18.4■□□□□ 0.54
SFXN5-220ENST00000490056 CHST12Q9NRB3 414 aa18.4■□□□□ 0.54
SFXN5-220ENST00000490056 RGS18Q9NS28 235 aa18.4■□□□□ 0.54
SFXN5-220ENST00000490056 COLQQ9Y215 455 aaPredicted RBP18.4■□□□□ 0.54
SFXN5-220ENST00000490056 PCDHA5Q9Y5H7 936 aa18.4■□□□□ 0.54
SFXN5-220ENST00000490056 CNTNAP2Q9UHC6 1331 aa18.4■□□□□ 0.54
SFXN5-220ENST00000490056 C9IYK1 514 aa18.39■□□□□ 0.53
SFXN5-220ENST00000490056 EFCAB14O75071 495 aa18.39■□□□□ 0.53
SFXN5-220ENST00000490056 PPP1R37O75864 691 aa18.39■□□□□ 0.53
SFXN5-220ENST00000490056 AXLP30530 894 aa18.39■□□□□ 0.53
SFXN5-220ENST00000490056 KCNJ6P48051 423 aa18.39■□□□□ 0.53
SFXN5-220ENST00000490056 KCNA1Q09470 495 aa18.39■□□□□ 0.53
SFXN5-220ENST00000490056 STRN3Q13033 797 aa18.39■□□□□ 0.53
SFXN5-220ENST00000490056 UBXN11Q5T124 520 aa18.39■□□□□ 0.53
SFXN5-220ENST00000490056 NOTUMQ6P988 496 aa18.39■□□□□ 0.53
SFXN5-220ENST00000490056 ELOA2Q8IYF1 753 aaPredicted RBP18.39■□□□□ 0.53
SFXN5-220ENST00000490056 MYOCDQ8IZQ8 938 aa18.39■□□□□ 0.53
SFXN5-220ENST00000490056 SLC17A8Q8NDX2 589 aa18.39■□□□□ 0.53
SFXN5-220ENST00000490056 PRIMPOLQ96LW4 560 aa18.39■□□□□ 0.53
SFXN5-220ENST00000490056 ACO2Q99798 780 aaKnown RBP18.39■□□□□ 0.53
SFXN5-220ENST00000490056 EIF2AQ9BY44 585 aaKnown RBP18.39■□□□□ 0.53
SFXN5-220ENST00000490056 PDZD7Q9H5P4 517 aa18.39■□□□□ 0.53
SFXN5-220ENST00000490056 HOOK1Q9UJC3 728 aaKnown RBP18.39■□□□□ 0.53
SFXN5-220ENST00000490056 SLC4A7Q9Y6M7 1214 aa18.39■□□□□ 0.53
SFXN5-220ENST00000490056 PRPF6O94906 941 aaKnown RBP18.38■□□□□ 0.53
SFXN5-220ENST00000490056 UPP2O95045 317 aa18.38■□□□□ 0.53
SFXN5-220ENST00000490056 STK4Q13043 487 aa18.38■□□□□ 0.53
SFXN5-220ENST00000490056 ATF7IP2Q5U623 682 aa18.38■□□□□ 0.53
SFXN5-220ENST00000490056 FAM109BQ6ICB4 259 aaPredicted RBP18.38■□□□□ 0.53
SFXN5-220ENST00000490056 FAM117BQ6P1L5 589 aa18.38■□□□□ 0.53
SFXN5-220ENST00000490056 SLC24A5Q71RS6 500 aa18.38■□□□□ 0.53
SFXN5-220ENST00000490056 TDHQ8IZJ6 230 aa18.38■□□□□ 0.53
SFXN5-220ENST00000490056 KCNN1Q92952 543 aa18.38■□□□□ 0.53
SFXN5-220ENST00000490056 ZBTB45Q96K62 511 aaPredicted RBP18.38■□□□□ 0.53
SFXN5-220ENST00000490056 MRPL4Q9BYD3 311 aaKnown RBP18.38■□□□□ 0.53
SFXN5-220ENST00000490056 MTIF3Q9H2K0 278 aaKnown RBP18.38■□□□□ 0.53
SFXN5-220ENST00000490056 CLSTN2Q9H4D0 955 aa18.38■□□□□ 0.53
SFXN5-220ENST00000490056 PCDHB13Q9Y5F0 798 aa18.38■□□□□ 0.53
SFXN5-220ENST00000490056 PTPRSQ13332 1948 aa18.37■□□□□ 0.53
SFXN5-220ENST00000490056 A0A1B0GUA9 196 aa18.37■□□□□ 0.53
SFXN5-220ENST00000490056 GRXCR1A8MXD5 290 aa18.37■□□□□ 0.53
SFXN5-220ENST00000490056 N4BP3O15049 544 aa18.37■□□□□ 0.53
SFXN5-220ENST00000490056 RHOBTB3O94955 611 aa18.37■□□□□ 0.53
SFXN5-220ENST00000490056 SMC2O95347 1197 aa18.37■□□□□ 0.53
SFXN5-220ENST00000490056 NPTXRO95502 500 aa18.37■□□□□ 0.53
SFXN5-220ENST00000490056 AMHP03971 560 aa18.37■□□□□ 0.53
SFXN5-220ENST00000490056 SARSP49591 514 aaKnown RBP18.37■□□□□ 0.53
SFXN5-220ENST00000490056 FAM189BP81408 668 aa18.37■□□□□ 0.53
SFXN5-220ENST00000490056 L1TD1Q5T7N2 865 aaKnown RBP18.37■□□□□ 0.53
SFXN5-220ENST00000490056 ECHDC2Q86YB7 292 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms