RNA–Protein interactions for RNA: ENST00000489758.1

CLIC4-203, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 439 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-203ENST00000489758 PAK2Q13177 524 aa17.71■□□□□ 0.43
CLIC4-203ENST00000489758 MORC3Q14149 939 aa17.71■□□□□ 0.43
CLIC4-203ENST00000489758 PCBP1Q15365 356 aaKnown RBP eCLIP17.71■□□□□ 0.43
CLIC4-203ENST00000489758 MAPK6Q16659 721 aa17.71■□□□□ 0.43
CLIC4-203ENST00000489758 CAVIN1Q6NZI2 390 aaKnown RBP17.71■□□□□ 0.43
CLIC4-203ENST00000489758 CCDC47Q96A33 483 aaKnown RBP17.71■□□□□ 0.43
CLIC4-203ENST00000489758 IFIH1Q9BYX4 1025 aaKnown RBP17.71■□□□□ 0.43
CLIC4-203ENST00000489758 TMX1Q9H3N1 280 aa17.71■□□□□ 0.43
CLIC4-203ENST00000489758 AGPAT5Q9NUQ2 364 aa17.71■□□□□ 0.43
CLIC4-203ENST00000489758 USP20Q9Y2K6 914 aa17.71■□□□□ 0.43
CLIC4-203ENST00000489758 GDAQ9Y2T3 454 aa17.71■□□□□ 0.43
CLIC4-203ENST00000489758 SIP14410 1827 aa17.7■□□□□ 0.42
CLIC4-203ENST00000489758 TANC1Q9C0D5 1861 aa17.7■□□□□ 0.42
CLIC4-203ENST00000489758 ACKR2O00590 384 aa17.7■□□□□ 0.42
CLIC4-203ENST00000489758 GPR182O15218 404 aa17.7■□□□□ 0.42
CLIC4-203ENST00000489758 EIF3DO15371 548 aaKnown RBP eCLIP17.7■□□□□ 0.42
CLIC4-203ENST00000489758 KCNA1Q09470 495 aa17.7■□□□□ 0.42
CLIC4-203ENST00000489758 ALCAMQ13740 583 aa17.7■□□□□ 0.42
CLIC4-203ENST00000489758 SKOR2Q2VWA4 1001 aaPredicted RBP17.7■□□□□ 0.42
CLIC4-203ENST00000489758 C16orf59Q7L2K0 433 aa17.7■□□□□ 0.42
CLIC4-203ENST00000489758 CATSPER4Q7RTX7 472 aa17.7■□□□□ 0.42
CLIC4-203ENST00000489758 DEFB128Q7Z7B8 93 aa17.7■□□□□ 0.42
CLIC4-203ENST00000489758 MAP4K3Q8IVH8 894 aa17.7■□□□□ 0.42
CLIC4-203ENST00000489758 ZNF507Q8TCN5 953 aa17.7■□□□□ 0.42
CLIC4-203ENST00000489758 SCFD1Q8WVM8 642 aa17.7■□□□□ 0.42
CLIC4-203ENST00000489758 HVCN1Q96D96 273 aa17.7■□□□□ 0.42
CLIC4-203ENST00000489758 PRIMPOLQ96LW4 560 aa17.7■□□□□ 0.42
CLIC4-203ENST00000489758 PRMT7Q9NVM4 692 aaPredicted RBP17.7■□□□□ 0.42
CLIC4-203ENST00000489758 CNTNAP2Q9UHC6 1331 aa17.7■□□□□ 0.42
CLIC4-203ENST00000489758 ERLIN2O94905 339 aa17.69■□□□□ 0.42
CLIC4-203ENST00000489758 PRPF6O94906 941 aaKnown RBP17.69■□□□□ 0.42
CLIC4-203ENST00000489758 ABCD1P33897 745 aa17.69■□□□□ 0.42
CLIC4-203ENST00000489758 EPHB4P54760 987 aa17.69■□□□□ 0.42
CLIC4-203ENST00000489758 FPGSQ05932 587 aa17.69■□□□□ 0.42
CLIC4-203ENST00000489758 NFX1Q12986 1120 aaKnown RBP17.69■□□□□ 0.42
CLIC4-203ENST00000489758 DSC3Q14574 896 aa17.69■□□□□ 0.42
CLIC4-203ENST00000489758 BMT2Q1RMZ1 405 aa17.69■□□□□ 0.42
CLIC4-203ENST00000489758 L1TD1Q5T7N2 865 aaKnown RBP17.69■□□□□ 0.42
CLIC4-203ENST00000489758 ZNF658Q5TYW1 1059 aaPredicted RBP17.69■□□□□ 0.42
CLIC4-203ENST00000489758 DBF4BQ8NFT6 615 aa17.69■□□□□ 0.42
CLIC4-203ENST00000489758 IKZF4Q9H2S9 585 aa17.69■□□□□ 0.42
CLIC4-203ENST00000489758 IL23AQ9NPF7 189 aa17.69■□□□□ 0.42
CLIC4-203ENST00000489758 PCDHB13Q9Y5F0 798 aa17.69■□□□□ 0.42
CLIC4-203ENST00000489758 ZMYM2Q9UBW7 1377 aa17.68■□□□□ 0.42
CLIC4-203ENST00000489758 BIN1O00499 593 aa17.68■□□□□ 0.42
CLIC4-203ENST00000489758 MGEA5O60502 916 aa17.68■□□□□ 0.42
CLIC4-203ENST00000489758 PIGRP01833 764 aa17.68■□□□□ 0.42
CLIC4-203ENST00000489758 PFKMP08237 780 aa17.68■□□□□ 0.42
CLIC4-203ENST00000489758 ARF4P18085 180 aaPredicted RBP17.68■□□□□ 0.42
CLIC4-203ENST00000489758 STRN3Q13033 797 aa17.68■□□□□ 0.42
CLIC4-203ENST00000489758 PPIGQ13427 754 aaKnown RBP eCLIP17.68■□□□□ 0.42
CLIC4-203ENST00000489758 PRPF4BQ13523 1007 aaKnown RBP17.68■□□□□ 0.42
CLIC4-203ENST00000489758 COBLL1Q53SF7 1204 aa17.68■□□□□ 0.42
CLIC4-203ENST00000489758 ISM2Q6H9L7 571 aa17.68■□□□□ 0.42
CLIC4-203ENST00000489758 SMYD4Q8IYR2 804 aaPredicted RBP17.68■□□□□ 0.42
CLIC4-203ENST00000489758 TRIML1Q8N9V2 468 aa17.68■□□□□ 0.42
CLIC4-203ENST00000489758 LINC01599Q8WXQ3 324 aa17.68■□□□□ 0.42
CLIC4-203ENST00000489758 SEPT8Q92599 483 aa17.68■□□□□ 0.42
CLIC4-203ENST00000489758 TARS2Q9BW92 718 aaKnown RBP17.68■□□□□ 0.42
CLIC4-203ENST00000489758 UBE4BO95155 1302 aa17.68■□□□□ 0.42
CLIC4-203ENST00000489758 LTBP2Q14767 1821 aa17.68■□□□□ 0.42
CLIC4-203ENST00000489758 KAT6AQ92794 2004 aa17.67■□□□□ 0.42
CLIC4-203ENST00000489758 A0A1B0GUA9 196 aa17.67■□□□□ 0.42
CLIC4-203ENST00000489758 ACRP10323 421 aa17.67■□□□□ 0.42
CLIC4-203ENST00000489758 SLC39A4Q6P5W5 647 aa17.67■□□□□ 0.42
CLIC4-203ENST00000489758 CNKSR3Q6P9H4 555 aa17.67■□□□□ 0.42
CLIC4-203ENST00000489758 STXBP4Q6ZWJ1 553 aa17.67■□□□□ 0.42
CLIC4-203ENST00000489758 RTN4RL1Q86UN2 441 aaPredicted RBP17.67■□□□□ 0.42
CLIC4-203ENST00000489758 RPUSD2Q8IZ73 545 aaKnown RBP17.67■□□□□ 0.42
CLIC4-203ENST00000489758 MYOCDQ8IZQ8 938 aa17.67■□□□□ 0.42
CLIC4-203ENST00000489758 APBB2Q92870 758 aa17.67■□□□□ 0.42
CLIC4-203ENST00000489758 SYAP1Q96A49 352 aaPredicted RBP17.67■□□□□ 0.42
CLIC4-203ENST00000489758 CPB2Q96IY4 423 aa17.67■□□□□ 0.42
CLIC4-203ENST00000489758 ACCSQ96QU6 501 aa17.67■□□□□ 0.42
CLIC4-203ENST00000489758 ACO2Q99798 780 aaKnown RBP17.67■□□□□ 0.42
CLIC4-203ENST00000489758 LBHD1Q9BQE6 289 aaPredicted RBP17.67■□□□□ 0.42
CLIC4-203ENST00000489758 MRPL4Q9BYD3 311 aaKnown RBP17.67■□□□□ 0.42
CLIC4-203ENST00000489758 GTPBP4Q9BZE4 634 aaKnown RBP17.67■□□□□ 0.42
CLIC4-203ENST00000489758 PTPRHQ9HD43 1115 aa17.67■□□□□ 0.42
CLIC4-203ENST00000489758 CHST12Q9NRB3 414 aa17.67■□□□□ 0.42
CLIC4-203ENST00000489758 PIN4Q9Y237 131 aaKnown RBP17.67■□□□□ 0.42
CLIC4-203ENST00000489758 EVPLQ92817 2033 aa17.67■□□□□ 0.42
CLIC4-203ENST00000489758 ABLIM1O14639 778 aa17.66■□□□□ 0.42
CLIC4-203ENST00000489758 PROZP22891 400 aa17.66■□□□□ 0.42
CLIC4-203ENST00000489758 AXLP30530 894 aa17.66■□□□□ 0.42
CLIC4-203ENST00000489758 MAGEA10P43363 369 aaPredicted RBP17.66■□□□□ 0.42
CLIC4-203ENST00000489758 FXR1P51114 621 aaKnown RBP eCLIP17.66■□□□□ 0.42
CLIC4-203ENST00000489758 UBXN11Q5T124 520 aa17.66■□□□□ 0.42
CLIC4-203ENST00000489758 EEF1DP3Q658K8 133 aa17.66■□□□□ 0.42
CLIC4-203ENST00000489758 CHRDL2Q6WN34 429 aa17.66■□□□□ 0.42
CLIC4-203ENST00000489758 ZPBP2Q6X784 338 aa17.66■□□□□ 0.42
CLIC4-203ENST00000489758 FAM43BQ6ZT52 329 aaPredicted RBP17.66■□□□□ 0.42
CLIC4-203ENST00000489758 NELFCDQ8IXH7 590 aa17.66■□□□□ 0.42
CLIC4-203ENST00000489758 GUF1Q8N442 669 aaKnown RBP17.66■□□□□ 0.42
CLIC4-203ENST00000489758 PDZD7Q9H5P4 517 aa17.66■□□□□ 0.42
CLIC4-203ENST00000489758 MAPK8IP1Q9UQF2 711 aa17.66■□□□□ 0.42
CLIC4-203ENST00000489758 TNFSF13BQ9Y275 285 aa17.66■□□□□ 0.42
CLIC4-203ENST00000489758 TISP43B9A030 160 aa17.65■□□□□ 0.42
CLIC4-203ENST00000489758 ANKRD63C9JTQ0 380 aa17.65■□□□□ 0.42
CLIC4-203ENST00000489758 TGFB1I1O43294 461 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms