RNA–Protein interactions for RNA: ENST00000488860.1

TRAIP-209, Transcript of TRAF interacting protein, humanhuman

TSL 3

Gene TRAIP, Length 326 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-209ENST00000488860 FBXO47Q5MNV8 452 aa13.53□□□□□ -0.24
TRAIP-209ENST00000488860 TRAF7Q6Q0C0 670 aa13.53□□□□□ -0.24
TRAIP-209ENST00000488860 TSHZ1Q6ZSZ6 1077 aa13.53□□□□□ -0.24
TRAIP-209ENST00000488860 EPM2AIP1Q7L775 607 aaPredicted RBP13.53□□□□□ -0.24
TRAIP-209ENST00000488860 FAM228AQ86W67 206 aa13.53□□□□□ -0.24
TRAIP-209ENST00000488860 IFNLR1Q8IU57 520 aaPredicted RBP13.53□□□□□ -0.24
TRAIP-209ENST00000488860 SCFD1Q8WVM8 642 aa13.53□□□□□ -0.24
TRAIP-209ENST00000488860 DPF3Q92784 378 aa13.53□□□□□ -0.24
TRAIP-209ENST00000488860 TRIM43Q96BQ3 446 aaPredicted RBP13.53□□□□□ -0.24
TRAIP-209ENST00000488860 CPB2Q96IY4 423 aa13.53□□□□□ -0.24
TRAIP-209ENST00000488860 GTPBP4Q9BZE4 634 aaKnown RBP13.53□□□□□ -0.24
TRAIP-209ENST00000488860 OSBPL7Q9BZF2 842 aa13.53□□□□□ -0.24
TRAIP-209ENST00000488860 IKZF4Q9H2S9 585 aa13.53□□□□□ -0.24
TRAIP-209ENST00000488860 ST6GALNAC4Q9H4F1 302 aa13.53□□□□□ -0.24
TRAIP-209ENST00000488860 TMEM134Q9H6X4 195 aa13.53□□□□□ -0.24
TRAIP-209ENST00000488860 ANO10Q9NW15 660 aa13.53□□□□□ -0.24
TRAIP-209ENST00000488860 DACH1Q9UI36 760 aa13.53□□□□□ -0.24
TRAIP-209ENST00000488860 EXOC7Q9UPT5 735 aa13.53□□□□□ -0.24
TRAIP-209ENST00000488860 USP20Q9Y2K6 914 aa13.53□□□□□ -0.24
TRAIP-209ENST00000488860 NOC2LQ9Y3T9 749 aaKnown RBP13.53□□□□□ -0.24
TRAIP-209ENST00000488860 ZMYM2Q9UBW7 1377 aa13.53□□□□□ -0.24
TRAIP-209ENST00000488860 CITO14578 2027 aa13.52□□□□□ -0.24
TRAIP-209ENST00000488860 PSMA7O14818 248 aa13.52□□□□□ -0.25
TRAIP-209ENST00000488860 HNRNPDLO14979 420 aaKnown RBP13.52□□□□□ -0.25
TRAIP-209ENST00000488860 KIAA0355O15063 1070 aa13.52□□□□□ -0.25
TRAIP-209ENST00000488860 TSPAN1O60635 241 aa13.52□□□□□ -0.25
TRAIP-209ENST00000488860 KIF20AO95235 890 aa13.52□□□□□ -0.25
TRAIP-209ENST00000488860 CD44P16070 742 aaKnown RBP13.52□□□□□ -0.25
TRAIP-209ENST00000488860 CD52P31358 61 aa13.52□□□□□ -0.25
TRAIP-209ENST00000488860 LIG4P49917 911 aa13.52□□□□□ -0.25
TRAIP-209ENST00000488860 LPIN1Q14693 890 aa13.52□□□□□ -0.25
TRAIP-209ENST00000488860 MBTPS1Q14703 1052 aa13.52□□□□□ -0.25
TRAIP-209ENST00000488860 DEFB128Q7Z7B8 93 aa13.52□□□□□ -0.25
TRAIP-209ENST00000488860 MAP4K3Q8IVH8 894 aa13.52□□□□□ -0.25
TRAIP-209ENST00000488860 GUF1Q8N442 669 aaKnown RBP13.52□□□□□ -0.25
TRAIP-209ENST00000488860 ZNF507Q8TCN5 953 aa13.52□□□□□ -0.25
TRAIP-209ENST00000488860 STRA6Q9BX79 667 aa13.52□□□□□ -0.25
TRAIP-209ENST00000488860 MRPL4Q9BYD3 311 aaKnown RBP13.52□□□□□ -0.25
TRAIP-209ENST00000488860 TMEM206Q9H813 350 aa13.52□□□□□ -0.25
TRAIP-209ENST00000488860 ANKFY1Q9P2R3 1169 aa13.52□□□□□ -0.25
TRAIP-209ENST00000488860 PIN4Q9Y237 131 aaKnown RBP13.52□□□□□ -0.25
TRAIP-209ENST00000488860 CNTNAP2Q9UHC6 1331 aa13.52□□□□□ -0.25
TRAIP-209ENST00000488860 RALGAPA2Q2PPJ7 1873 aa13.52□□□□□ -0.25
TRAIP-209ENST00000488860 ANK1P16157 1881 aa13.51□□□□□ -0.25
TRAIP-209ENST00000488860 CAPN15O75808 1086 aa13.51□□□□□ -0.25
TRAIP-209ENST00000488860 TIMP1P01033 207 aa13.51□□□□□ -0.25
TRAIP-209ENST00000488860 HARSP12081 509 aaKnown RBP13.51□□□□□ -0.25
TRAIP-209ENST00000488860 SYN1P17600 705 aa13.51□□□□□ -0.25
TRAIP-209ENST00000488860 SCP2P22307 547 aa13.51□□□□□ -0.25
TRAIP-209ENST00000488860 PPP1R2P41236 205 aa13.51□□□□□ -0.25
TRAIP-209ENST00000488860 STX17P56962 302 aa13.51□□□□□ -0.25
TRAIP-209ENST00000488860 AMHR2Q16671 573 aa13.51□□□□□ -0.25
TRAIP-209ENST00000488860 KNOP1Q1ED39 458 aaKnown RBP13.51□□□□□ -0.25
TRAIP-209ENST00000488860 BMT2Q1RMZ1 405 aa13.51□□□□□ -0.25
TRAIP-209ENST00000488860 ANO6Q4KMQ2 910 aa13.51□□□□□ -0.25
TRAIP-209ENST00000488860 PPP4R3CPQ6ZMV5 832 aa13.51□□□□□ -0.25
TRAIP-209ENST00000488860 C11orf57Q6ZUT1 292 aaPredicted RBP13.51□□□□□ -0.25
TRAIP-209ENST00000488860 CDR2LQ86X02 465 aaPredicted RBP13.51□□□□□ -0.25
TRAIP-209ENST00000488860 ADSSL1Q8N142 457 aa13.51□□□□□ -0.25
TRAIP-209ENST00000488860 MLKLQ8NB16 471 aa13.51□□□□□ -0.25
TRAIP-209ENST00000488860 NELFBQ8WX92 580 aa13.51□□□□□ -0.25
TRAIP-209ENST00000488860 PRIMPOLQ96LW4 560 aa13.51□□□□□ -0.25
TRAIP-209ENST00000488860 TARS2Q9BW92 718 aaKnown RBP13.51□□□□□ -0.25
TRAIP-209ENST00000488860 IFIH1Q9BYX4 1025 aaKnown RBP13.51□□□□□ -0.25
TRAIP-209ENST00000488860 DNAJC25Q9H1X3 360 aa13.51□□□□□ -0.25
TRAIP-209ENST00000488860 FZD8Q9H461 694 aa13.51□□□□□ -0.25
TRAIP-209ENST00000488860 AGO3Q9H9G7 860 aaKnown RBP13.51□□□□□ -0.25
TRAIP-209ENST00000488860 ERVK-5Q9HDB9 667 aa13.51□□□□□ -0.25
TRAIP-209ENST00000488860 AGPAT5Q9NUQ2 364 aa13.51□□□□□ -0.25
TRAIP-209ENST00000488860 ZMYND8Q9ULU4 1186 aaPredicted RBP13.51□□□□□ -0.25
TRAIP-209ENST00000488860 ST3GAL5Q9UNP4 418 aa13.51□□□□□ -0.25
TRAIP-209ENST00000488860 TRIM49BA6NDI0 452 aa13.5□□□□□ -0.25
TRAIP-209ENST00000488860 TTLL13PA6NNM8 815 aa13.5□□□□□ -0.25
TRAIP-209ENST00000488860 PPP1R3GB7ZBB8 358 aa13.5□□□□□ -0.25
TRAIP-209ENST00000488860 TISP43B9A030 160 aa13.5□□□□□ -0.25
TRAIP-209ENST00000488860 ACKR2O00590 384 aa13.5□□□□□ -0.25
TRAIP-209ENST00000488860 GPR182O15218 404 aa13.5□□□□□ -0.25
TRAIP-209ENST00000488860 NBNO60934 754 aa13.5□□□□□ -0.25
TRAIP-209ENST00000488860 ARF4P18085 180 aaPredicted RBP13.5□□□□□ -0.25
TRAIP-209ENST00000488860 IBSPP21815 317 aaPredicted RBP13.5□□□□□ -0.25
TRAIP-209ENST00000488860 ITGB8P26012 769 aa13.5□□□□□ -0.25
TRAIP-209ENST00000488860 HOXD13P35453 343 aa13.5□□□□□ -0.25
TRAIP-209ENST00000488860 NCBP1Q09161 790 aaKnown RBP13.5□□□□□ -0.25
TRAIP-209ENST00000488860 PAK1Q13153 545 aa13.5□□□□□ -0.25
TRAIP-209ENST00000488860 FAM187BQ17R55 369 aa13.5□□□□□ -0.25
TRAIP-209ENST00000488860 COBLL1Q53SF7 1204 aa13.5□□□□□ -0.25
TRAIP-209ENST00000488860 ATF7IP2Q5U623 682 aa13.5□□□□□ -0.25
TRAIP-209ENST00000488860 HS2ST1Q7LGA3 356 aa13.5□□□□□ -0.25
TRAIP-209ENST00000488860 ZBTB33Q86T24 672 aa13.5□□□□□ -0.25
TRAIP-209ENST00000488860 USP38Q8NB14 1042 aa13.5□□□□□ -0.25
TRAIP-209ENST00000488860 NOC3LQ8WTT2 800 aaKnown RBP13.5□□□□□ -0.25
TRAIP-209ENST00000488860 TSG101Q99816 390 aa13.5□□□□□ -0.25
TRAIP-209ENST00000488860 FUCA2Q9BTY2 467 aa13.5□□□□□ -0.25
TRAIP-209ENST00000488860 PADI3Q9ULW8 664 aa13.5□□□□□ -0.25
TRAIP-209ENST00000488860 TRIP11Q15643 1979 aa13.5□□□□□ -0.25
TRAIP-209ENST00000488860 PDCD11Q14690 1871 aaKnown RBP13.5□□□□□ -0.25
TRAIP-209ENST00000488860 ANKRD63C9JTQ0 380 aa13.49□□□□□ -0.25
TRAIP-209ENST00000488860 N4BP3O15049 544 aa13.49□□□□□ -0.25
TRAIP-209ENST00000488860 CLIC2O15247 247 aa13.49□□□□□ -0.25
TRAIP-209ENST00000488860 CALUO43852 315 aaPredicted RBP13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms