RNA–Protein interactions for RNA: ENST00000488494.5

ITGB1-215, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-215ENST00000488494 CUL4AQ13619 759 aa19.67■□□□□ 0.74
ITGB1-215ENST00000488494 PDIA5Q14554 519 aa19.67■□□□□ 0.74
ITGB1-215ENST00000488494 LARP1BQ659C4 914 aaKnown RBP19.67■□□□□ 0.74
ITGB1-215ENST00000488494 DTHD1Q6ZMT9 781 aa19.67■□□□□ 0.74
ITGB1-215ENST00000488494 AGMOQ6ZNB7 445 aa19.67■□□□□ 0.74
ITGB1-215ENST00000488494 RBM23Q86U06 439 aaKnown RBP19.67■□□□□ 0.74
ITGB1-215ENST00000488494 SLC39A11Q8N1S5 342 aa19.67■□□□□ 0.74
ITGB1-215ENST00000488494 MICAL1Q8TDZ2 1067 aa19.67■□□□□ 0.74
ITGB1-215ENST00000488494 BSNDQ8WZ55 320 aa19.67■□□□□ 0.74
ITGB1-215ENST00000488494 CCDC51Q96ER9 411 aa19.67■□□□□ 0.74
ITGB1-215ENST00000488494 BHMT2Q9H2M3 363 aa19.67■□□□□ 0.74
ITGB1-215ENST00000488494 RSAD1Q9HA92 442 aa19.67■□□□□ 0.74
ITGB1-215ENST00000488494 ENTPD7Q9NQZ7 604 aa19.67■□□□□ 0.74
ITGB1-215ENST00000488494 LZTS1Q9Y250 596 aa19.67■□□□□ 0.74
ITGB1-215ENST00000488494 CNTNAP2Q9UHC6 1331 aa19.67■□□□□ 0.74
ITGB1-215ENST00000488494 FSCN2O14926 492 aa19.66■□□□□ 0.74
ITGB1-215ENST00000488494 OFD1O75665 1012 aa19.66■□□□□ 0.74
ITGB1-215ENST00000488494 IL9P15248 144 aa19.66■□□□□ 0.74
ITGB1-215ENST00000488494 ARF4P18085 180 aaPredicted RBP19.66■□□□□ 0.74
ITGB1-215ENST00000488494 CYP11B2P19099 503 aa19.66■□□□□ 0.74
ITGB1-215ENST00000488494 LTBRP36941 435 aa19.66■□□□□ 0.74
ITGB1-215ENST00000488494 BCAR1P56945 870 aa19.66■□□□□ 0.74
ITGB1-215ENST00000488494 ERVFC1P60507 584 aa19.66■□□□□ 0.74
ITGB1-215ENST00000488494 DLX2Q07687 328 aaPredicted RBP19.66■□□□□ 0.74
ITGB1-215ENST00000488494 NCBP1Q09161 790 aaKnown RBP19.66■□□□□ 0.74
ITGB1-215ENST00000488494 CLUL1Q15846 466 aa19.66■□□□□ 0.74
ITGB1-215ENST00000488494 PLPP4Q5VZY2 271 aa19.66■□□□□ 0.74
ITGB1-215ENST00000488494 KRT79Q5XKE5 535 aa19.66■□□□□ 0.74
ITGB1-215ENST00000488494 CDCA2Q69YH5 1023 aaPredicted RBP19.66■□□□□ 0.74
ITGB1-215ENST00000488494 MRPL10Q7Z7H8 261 aaKnown RBP19.66■□□□□ 0.74
ITGB1-215ENST00000488494 URGCPQ8TCY9 931 aa19.66■□□□□ 0.74
ITGB1-215ENST00000488494 TCF25Q9BQ70 676 aa19.66■□□□□ 0.74
ITGB1-215ENST00000488494 GBP3Q9H0R5 595 aa19.66■□□□□ 0.74
ITGB1-215ENST00000488494 IPPQ9Y573 584 aa19.66■□□□□ 0.74
ITGB1-215ENST00000488494 STK24Q9Y6E0 443 aa19.66■□□□□ 0.74
ITGB1-215ENST00000488494 VPS37CA5D8V6 355 aaPredicted RBP19.65■□□□□ 0.74
ITGB1-215ENST00000488494 NT5C1B-RDH14C9J2C7 533 aa19.65■□□□□ 0.74
ITGB1-215ENST00000488494 B4GALT3O60512 393 aa19.65■□□□□ 0.74
ITGB1-215ENST00000488494 NCLP19338 710 aaKnown RBP19.65■□□□□ 0.74
ITGB1-215ENST00000488494 CDC25AP30304 524 aa19.65■□□□□ 0.74
ITGB1-215ENST00000488494 ALDH7A1P49419 539 aaKnown RBP19.65■□□□□ 0.74
ITGB1-215ENST00000488494 NDUFV1P49821 464 aa19.65■□□□□ 0.74
ITGB1-215ENST00000488494 KRT17Q04695 432 aa19.65■□□□□ 0.74
ITGB1-215ENST00000488494 TMEM173Q86WV6 379 aaPredicted RBP19.65■□□□□ 0.74
ITGB1-215ENST00000488494 ZBTB8OSQ8IWT0 167 aa19.65■□□□□ 0.74
ITGB1-215ENST00000488494 EFHBQ8N7U6 833 aa19.65■□□□□ 0.74
ITGB1-215ENST00000488494 SMG8Q8ND04 991 aaKnown RBP19.65■□□□□ 0.74
ITGB1-215ENST00000488494 CSRNP2Q9H175 543 aa19.65■□□□□ 0.74
ITGB1-215ENST00000488494 TLE6Q9H808 572 aa19.65■□□□□ 0.74
ITGB1-215ENST00000488494 PUF60Q9UHX1 559 aaKnown RBP19.65■□□□□ 0.74
ITGB1-215ENST00000488494 GRXCR2A6NFK2 248 aa19.64■□□□□ 0.73
ITGB1-215ENST00000488494 PER2O15055 1255 aa19.64■□□□□ 0.73
ITGB1-215ENST00000488494 ITGA4P13612 1032 aa19.64■□□□□ 0.73
ITGB1-215ENST00000488494 AFF1P51825 1210 aaKnown RBP19.64■□□□□ 0.73
ITGB1-215ENST00000488494 PUS10Q3MIT2 529 aaKnown RBP19.64■□□□□ 0.73
ITGB1-215ENST00000488494 PDE12Q6L8Q7 609 aaKnown RBP19.64■□□□□ 0.73
ITGB1-215ENST00000488494 CDR2LQ86X02 465 aaPredicted RBP19.64■□□□□ 0.73
ITGB1-215ENST00000488494 DEPTORQ8TB45 409 aa19.64■□□□□ 0.73
ITGB1-215ENST00000488494 MMTAG2Q9BU76 263 aaKnown RBP19.64■□□□□ 0.73
ITGB1-215ENST00000488494 APOL6Q9BWW8 343 aa19.64■□□□□ 0.73
ITGB1-215ENST00000488494 TRIM6Q9C030 488 aaPredicted RBP19.64■□□□□ 0.73
ITGB1-215ENST00000488494 NXF3Q9H4D5 531 aaKnown RBP19.64■□□□□ 0.73
ITGB1-215ENST00000488494 NRDE2Q9H7Z3 1164 aa19.64■□□□□ 0.73
ITGB1-215ENST00000488494 DNAJB4Q9UDY4 337 aa19.64■□□□□ 0.73
ITGB1-215ENST00000488494 HES2Q9Y543 173 aa19.64■□□□□ 0.73
ITGB1-215ENST00000488494 VWA3AA6NCI4 1184 aa19.63■□□□□ 0.73
ITGB1-215ENST00000488494 E9PMD0 336 aa19.63■□□□□ 0.73
ITGB1-215ENST00000488494 GLP2RO95838 553 aa19.63■□□□□ 0.73
ITGB1-215ENST00000488494 MLH1P40692 756 aa19.63■□□□□ 0.73
ITGB1-215ENST00000488494 NAMPTP43490 491 aa19.63■□□□□ 0.73
ITGB1-215ENST00000488494 ADAM15Q13444 863 aa19.63■□□□□ 0.73
ITGB1-215ENST00000488494 ZRSR1Q15695 479 aaKnown RBP19.63■□□□□ 0.73
ITGB1-215ENST00000488494 PPP4R3CPQ6ZMV5 832 aa19.63■□□□□ 0.73
ITGB1-215ENST00000488494 CNNM3Q8NE01 707 aa19.63■□□□□ 0.73
ITGB1-215ENST00000488494 BCL7CQ8WUZ0 217 aaPredicted RBP19.63■□□□□ 0.73
ITGB1-215ENST00000488494 TMEM169Q96HH4 297 aa19.63■□□□□ 0.73
ITGB1-215ENST00000488494 KIFC3Q9BVG8 833 aa19.63■□□□□ 0.73
ITGB1-215ENST00000488494 C2orf40Q9H1Z8 148 aa19.63■□□□□ 0.73
ITGB1-215ENST00000488494 PRMT7Q9NVM4 692 aaPredicted RBP19.63■□□□□ 0.73
ITGB1-215ENST00000488494 BARX2Q9UMQ3 279 aaPredicted RBP19.63■□□□□ 0.73
ITGB1-215ENST00000488494 NCOR1O75376 2440 aa19.62■□□□□ 0.73
ITGB1-215ENST00000488494 HIDE1A8MVS5 230 aa19.62■□□□□ 0.73
ITGB1-215ENST00000488494 NPTXRO95502 500 aa19.62■□□□□ 0.73
ITGB1-215ENST00000488494 EYA4O95677 639 aa19.62■□□□□ 0.73
ITGB1-215ENST00000488494 POMCP01189 267 aa19.62■□□□□ 0.73
ITGB1-215ENST00000488494 LIG1P18858 919 aa19.62■□□□□ 0.73
ITGB1-215ENST00000488494 SLC11A1P49279 550 aa19.62■□□□□ 0.73
ITGB1-215ENST00000488494 RBM10P98175 930 aaKnown RBP19.62■□□□□ 0.73
ITGB1-215ENST00000488494 PPP2R5AQ15172 486 aa19.62■□□□□ 0.73
ITGB1-215ENST00000488494 DUSP6Q16828 381 aa19.62■□□□□ 0.73
ITGB1-215ENST00000488494 SLC27A1Q6PCB7 646 aa19.62■□□□□ 0.73
ITGB1-215ENST00000488494 TMC7Q7Z402 723 aa19.62■□□□□ 0.73
ITGB1-215ENST00000488494 KCNK18Q7Z418 384 aa19.62■□□□□ 0.73
ITGB1-215ENST00000488494 BRAPQ7Z569 592 aa19.62■□□□□ 0.73
ITGB1-215ENST00000488494 ZNF280BQ86YH2 543 aa19.62■□□□□ 0.73
ITGB1-215ENST00000488494 KIFAP3Q92845 792 aa19.62■□□□□ 0.73
ITGB1-215ENST00000488494 PRIMPOLQ96LW4 560 aa19.62■□□□□ 0.73
ITGB1-215ENST00000488494 RUSC1Q9BVN2 902 aa19.62■□□□□ 0.73
ITGB1-215ENST00000488494 RNF39Q9H2S5 420 aa19.62■□□□□ 0.73
ITGB1-215ENST00000488494 POLD4Q9HCU8 107 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms