RNA–Protein interactions for RNA: ENST00000488228.1

UBE4B-210, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-210ENST00000488228 MAPTP10636 758 aaKnown RBP12.17□□□□□ -0.46
UBE4B-210ENST00000488228 ARF4P18085 180 aaPredicted RBP12.17□□□□□ -0.46
UBE4B-210ENST00000488228 NMT1P30419 496 aaKnown RBP12.17□□□□□ -0.46
UBE4B-210ENST00000488228 HOXA11P31270 313 aaPredicted RBP12.17□□□□□ -0.46
UBE4B-210ENST00000488228 PBX2P40425 430 aa12.17□□□□□ -0.46
UBE4B-210ENST00000488228 GATMP50440 423 aa12.17□□□□□ -0.46
UBE4B-210ENST00000488228 EFNA5P52803 228 aa12.17□□□□□ -0.46
UBE4B-210ENST00000488228 RABGGTBP53611 331 aa12.17□□□□□ -0.46
UBE4B-210ENST00000488228 NCKAP1LP55160 1127 aa12.17□□□□□ -0.46
UBE4B-210ENST00000488228 PRPF4BQ13523 1007 aaKnown RBP12.17□□□□□ -0.46
UBE4B-210ENST00000488228 SNW1Q13573 536 aaKnown RBP12.17□□□□□ -0.46
UBE4B-210ENST00000488228 MAPK6Q16659 721 aa12.17□□□□□ -0.46
UBE4B-210ENST00000488228 TMEM132AQ24JP5 1023 aa12.17□□□□□ -0.46
UBE4B-210ENST00000488228 PPP4R3CPQ6ZMV5 832 aa12.17□□□□□ -0.46
UBE4B-210ENST00000488228 HERC6Q8IVU3 1022 aa12.17□□□□□ -0.46
UBE4B-210ENST00000488228 FAM178BQ8IXR5 827 aa12.17□□□□□ -0.46
UBE4B-210ENST00000488228 TMEM161BQ8NDZ6 487 aa12.17□□□□□ -0.46
UBE4B-210ENST00000488228 CNNM3Q8NE01 707 aa12.17□□□□□ -0.46
UBE4B-210ENST00000488228 ENGASEQ8NFI3 743 aa12.17□□□□□ -0.46
UBE4B-210ENST00000488228 HPS3Q969F9 1004 aa12.17□□□□□ -0.46
UBE4B-210ENST00000488228 GBP4Q96PP9 640 aa12.17□□□□□ -0.46
UBE4B-210ENST00000488228 FIZ1Q96SL8 496 aa12.17□□□□□ -0.46
UBE4B-210ENST00000488228 FZD8Q9H461 694 aa12.17□□□□□ -0.46
UBE4B-210ENST00000488228 PANK4Q9NVE7 773 aa12.17□□□□□ -0.46
UBE4B-210ENST00000488228 PRMT7Q9NVM4 692 aaPredicted RBP12.17□□□□□ -0.46
UBE4B-210ENST00000488228 LARSQ9P2J5 1176 aaKnown RBP12.17□□□□□ -0.46
UBE4B-210ENST00000488228 USP25Q9UHP3 1055 aa12.17□□□□□ -0.46
UBE4B-210ENST00000488228 C9IYK1 514 aa12.16□□□□□ -0.46
UBE4B-210ENST00000488228 TRAK2O60296 914 aa12.16□□□□□ -0.46
UBE4B-210ENST00000488228 NR1I2O75469 434 aa12.16□□□□□ -0.46
UBE4B-210ENST00000488228 MYOGP15173 224 aa12.16□□□□□ -0.46
UBE4B-210ENST00000488228 ZSCAN20P17040 1043 aaPredicted RBP12.16□□□□□ -0.46
UBE4B-210ENST00000488228 ATF7P17544 494 aaPredicted RBP12.16□□□□□ -0.46
UBE4B-210ENST00000488228 GAP43P17677 238 aa12.16□□□□□ -0.46
UBE4B-210ENST00000488228 SARSP49591 514 aaKnown RBP12.16□□□□□ -0.46
UBE4B-210ENST00000488228 CASP5P51878 434 aa12.16□□□□□ -0.46
UBE4B-210ENST00000488228 SMTNP53814 917 aa12.16□□□□□ -0.46
UBE4B-210ENST00000488228 UBE2HP62256 183 aa12.16□□□□□ -0.46
UBE4B-210ENST00000488228 AMPD3Q01432 767 aa12.16□□□□□ -0.46
UBE4B-210ENST00000488228 FAM187BQ17R55 369 aa12.16□□□□□ -0.46
UBE4B-210ENST00000488228 ZC2HC1CQ53FD0 456 aaPredicted RBP12.16□□□□□ -0.46
UBE4B-210ENST00000488228 UBXN11Q5T124 520 aa12.16□□□□□ -0.46
UBE4B-210ENST00000488228 EEF1DP3Q658K8 133 aa12.16□□□□□ -0.46
UBE4B-210ENST00000488228 CLEC17AQ6ZS10 378 aa12.16□□□□□ -0.46
UBE4B-210ENST00000488228 HAUS6Q7Z4H7 955 aa12.16□□□□□ -0.46
UBE4B-210ENST00000488228 RNF169Q8NCN4 708 aa12.16□□□□□ -0.46
UBE4B-210ENST00000488228 GLIS3Q8NEA6 775 aa12.16□□□□□ -0.46
UBE4B-210ENST00000488228 PRIMPOLQ96LW4 560 aa12.16□□□□□ -0.46
UBE4B-210ENST00000488228 C7orf25Q9BPX7 421 aa12.16□□□□□ -0.46
UBE4B-210ENST00000488228 EIF2AQ9BY44 585 aaKnown RBP12.16□□□□□ -0.46
UBE4B-210ENST00000488228 LRRC27Q9C0I9 530 aa12.16□□□□□ -0.46
UBE4B-210ENST00000488228 PDZD7Q9H5P4 517 aa12.16□□□□□ -0.46
UBE4B-210ENST00000488228 RGS18Q9NS28 235 aa12.16□□□□□ -0.46
UBE4B-210ENST00000488228 C1orf112Q9NSG2 853 aa12.16□□□□□ -0.46
UBE4B-210ENST00000488228 MYO9BQ13459 2157 aa12.16□□□□□ -0.46
UBE4B-210ENST00000488228 PLXNA4Q9HCM2 1894 aa12.15□□□□□ -0.46
UBE4B-210ENST00000488228 LCHNA4D1U4 455 aa12.15□□□□□ -0.46
UBE4B-210ENST00000488228 K7ERI5 159 aa12.15□□□□□ -0.46
UBE4B-210ENST00000488228 ACKR2O00590 384 aa12.15□□□□□ -0.46
UBE4B-210ENST00000488228 GTPBP6O43824 516 aaPredicted RBP12.15□□□□□ -0.46
UBE4B-210ENST00000488228 GJB5O95377 273 aa12.15□□□□□ -0.46
UBE4B-210ENST00000488228 NPTXRO95502 500 aa12.15□□□□□ -0.46
UBE4B-210ENST00000488228 MYBP10242 640 aa12.15□□□□□ -0.46
UBE4B-210ENST00000488228 PCBP1Q15365 356 aaKnown RBP eCLIP12.15□□□□□ -0.46
UBE4B-210ENST00000488228 HERC4Q5GLZ8 1057 aaPredicted RBP12.15□□□□□ -0.46
UBE4B-210ENST00000488228 HABP4Q5JVS0 413 aaKnown RBP12.15□□□□□ -0.46
UBE4B-210ENST00000488228 NT5DC1Q5TFE4 455 aa12.15□□□□□ -0.46
UBE4B-210ENST00000488228 CNNM4Q6P4Q7 775 aa12.15□□□□□ -0.46
UBE4B-210ENST00000488228 NOTUMQ6P988 496 aa12.15□□□□□ -0.46
UBE4B-210ENST00000488228 UNC13DQ70J99 1090 aa12.15□□□□□ -0.46
UBE4B-210ENST00000488228 SLC24A5Q71RS6 500 aa12.15□□□□□ -0.46
UBE4B-210ENST00000488228 NPAS4Q8IUM7 802 aa12.15□□□□□ -0.46
UBE4B-210ENST00000488228 CCDC65Q8IXS2 484 aa12.15□□□□□ -0.46
UBE4B-210ENST00000488228 LPPQ93052 612 aa12.15□□□□□ -0.46
UBE4B-210ENST00000488228 PBX4Q9BYU1 374 aa12.15□□□□□ -0.46
UBE4B-210ENST00000488228 IKZF4Q9H2S9 585 aa12.15□□□□□ -0.46
UBE4B-210ENST00000488228 MRPL44Q9H9J2 332 aaKnown RBP12.15□□□□□ -0.46
UBE4B-210ENST00000488228 CHST12Q9NRB3 414 aa12.15□□□□□ -0.46
UBE4B-210ENST00000488228 OLFML3Q9NRN5 406 aa12.15□□□□□ -0.46
UBE4B-210ENST00000488228 FAM105AQ9NUU6 356 aa12.15□□□□□ -0.46
UBE4B-210ENST00000488228 DACT1Q9NYF0 836 aa12.15□□□□□ -0.46
UBE4B-210ENST00000488228 CHD7Q9P2D1 2997 aa12.15□□□□□ -0.46
UBE4B-210ENST00000488228 ANKFY1Q9P2R3 1169 aa12.15□□□□□ -0.46
UBE4B-210ENST00000488228 SEL1LQ9UBV2 794 aa12.15□□□□□ -0.46
UBE4B-210ENST00000488228 YBX2Q9Y2T7 364 aaKnown RBP12.15□□□□□ -0.46
UBE4B-210ENST00000488228 MEIS3P2A8K0S8 358 aa12.14□□□□□ -0.47
UBE4B-210ENST00000488228 TISP43B9A030 160 aa12.14□□□□□ -0.47
UBE4B-210ENST00000488228 H0YCG3 227 aa12.14□□□□□ -0.47
UBE4B-210ENST00000488228 TLL1O43897 1013 aa12.14□□□□□ -0.47
UBE4B-210ENST00000488228 KLRC4O43908 158 aa12.14□□□□□ -0.47
UBE4B-210ENST00000488228 KINO60870 393 aaKnown RBP12.14□□□□□ -0.47
UBE4B-210ENST00000488228 PPP1R37O75864 691 aa12.14□□□□□ -0.47
UBE4B-210ENST00000488228 ARHGEF15O94989 841 aa12.14□□□□□ -0.47
UBE4B-210ENST00000488228 GCNT3O95395 438 aa12.14□□□□□ -0.47
UBE4B-210ENST00000488228 FGFR1P11362 822 aa12.14□□□□□ -0.47
UBE4B-210ENST00000488228 HARSP12081 509 aaKnown RBP12.14□□□□□ -0.47
UBE4B-210ENST00000488228 AXLP30530 894 aa12.14□□□□□ -0.47
UBE4B-210ENST00000488228 RAB27AP51159 221 aa12.14□□□□□ -0.47
UBE4B-210ENST00000488228 EHHADHQ08426 723 aa12.14□□□□□ -0.47
UBE4B-210ENST00000488228 DPYDQ12882 1025 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms