RNA–Protein interactions for RNA: ENST00000487698.5

SF3B1-211, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-211ENST00000487698 INSRRP14616 1297 aa10.3□□□□□ -0.76
SF3B1-211ENST00000487698 SLC9A1P19634 815 aa10.3□□□□□ -0.76
SF3B1-211ENST00000487698 CYP2B6P20813 491 aa10.3□□□□□ -0.76
SF3B1-211ENST00000487698 CYP2C19P33261 490 aa10.3□□□□□ -0.76
SF3B1-211ENST00000487698 APBA1Q02410 837 aa10.3□□□□□ -0.76
SF3B1-211ENST00000487698 LAMTOR4Q0VGL1 99 aa10.3□□□□□ -0.76
SF3B1-211ENST00000487698 STRN3Q13033 797 aa10.3□□□□□ -0.76
SF3B1-211ENST00000487698 SNRNP35Q16560 246 aaKnown RBP10.3□□□□□ -0.76
SF3B1-211ENST00000487698 EXOC3L4Q17RC7 722 aa10.3□□□□□ -0.76
SF3B1-211ENST00000487698 GBP6Q6ZN66 633 aa10.3□□□□□ -0.76
SF3B1-211ENST00000487698 CBWD2Q8IUF1 395 aa10.3□□□□□ -0.76
SF3B1-211ENST00000487698 SUGCTQ9HAC7 445 aa10.3□□□□□ -0.76
SF3B1-211ENST00000487698 FBXL5Q9UKA1 691 aa10.3□□□□□ -0.76
SF3B1-211ENST00000487698 ZNF215Q9UL58 517 aaPredicted RBP10.3□□□□□ -0.76
SF3B1-211ENST00000487698 H3BRB1 525 aa10.29□□□□□ -0.76
SF3B1-211ENST00000487698 K7ERI5 159 aa10.29□□□□□ -0.76
SF3B1-211ENST00000487698 CCDC175P0C221 793 aa10.29□□□□□ -0.76
SF3B1-211ENST00000487698 KRT13P13646 458 aa10.29□□□□□ -0.76
SF3B1-211ENST00000487698 VAMP7P51809 220 aa10.29□□□□□ -0.76
SF3B1-211ENST00000487698 EFNA5P52803 228 aa10.29□□□□□ -0.76
SF3B1-211ENST00000487698 POLR2FP61218 127 aaKnown RBP10.29□□□□□ -0.76
SF3B1-211ENST00000487698 DLG4P78352 724 aa10.29□□□□□ -0.76
SF3B1-211ENST00000487698 ENPEPQ07075 957 aa10.29□□□□□ -0.76
SF3B1-211ENST00000487698 DGKDQ16760 1214 aa10.29□□□□□ -0.76
SF3B1-211ENST00000487698 TSR1Q2NL82 804 aaKnown RBP10.29□□□□□ -0.76
SF3B1-211ENST00000487698 CBWD6Q4V339 395 aa10.29□□□□□ -0.76
SF3B1-211ENST00000487698 CBWD3Q5JTY5 395 aa10.29□□□□□ -0.76
SF3B1-211ENST00000487698 CBWD5Q5RIA9 395 aa10.29□□□□□ -0.76
SF3B1-211ENST00000487698 KLHDC7AQ5VTJ3 777 aa10.29□□□□□ -0.76
SF3B1-211ENST00000487698 TRIM65Q6PJ69 517 aa10.29□□□□□ -0.76
SF3B1-211ENST00000487698 PAXIP1Q6ZW49 1069 aaPredicted RBP10.29□□□□□ -0.76
SF3B1-211ENST00000487698 RDH13Q8NBN7 331 aa10.29□□□□□ -0.76
SF3B1-211ENST00000487698 POMGNT1Q8WZA1 660 aa10.29□□□□□ -0.76
SF3B1-211ENST00000487698 SYN2Q92777 582 aaPredicted RBP10.29□□□□□ -0.76
SF3B1-211ENST00000487698 SAAL1Q96ER3 474 aa10.29□□□□□ -0.76
SF3B1-211ENST00000487698 NUCKS1Q9H1E3 243 aaKnown RBP10.29□□□□□ -0.76
SF3B1-211ENST00000487698 TUT1Q9H6E5 874 aaKnown RBP10.29□□□□□ -0.76
SF3B1-211ENST00000487698 GCNT4Q9P109 453 aa10.29□□□□□ -0.76
SF3B1-211ENST00000487698 ANK1P16157 1881 aa10.29□□□□□ -0.76
SF3B1-211ENST00000487698 GOLGA8IPA6NC78 632 aa10.28□□□□□ -0.76
SF3B1-211ENST00000487698 GOLGA8JA6NMD2 632 aa10.28□□□□□ -0.76
SF3B1-211ENST00000487698 KIAA0391O15091 583 aaKnown RBP10.28□□□□□ -0.76
SF3B1-211ENST00000487698 PMM2O15305 246 aa10.28□□□□□ -0.76
SF3B1-211ENST00000487698 MSCO60682 206 aa10.28□□□□□ -0.76
SF3B1-211ENST00000487698 NDUFA10O95299 355 aa10.28□□□□□ -0.76
SF3B1-211ENST00000487698 ACTN1P12814 892 aa10.28□□□□□ -0.76
SF3B1-211ENST00000487698 LIG4P49917 911 aa10.28□□□□□ -0.76
SF3B1-211ENST00000487698 CLCN3P51790 818 aa10.28□□□□□ -0.76
SF3B1-211ENST00000487698 FCGRTP55899 365 aa10.28□□□□□ -0.76
SF3B1-211ENST00000487698 LACTBP83111 547 aaPredicted RBP10.28□□□□□ -0.76
SF3B1-211ENST00000487698 MYL7Q01449 175 aa10.28□□□□□ -0.76
SF3B1-211ENST00000487698 PPP3CAQ08209 521 aa10.28□□□□□ -0.76
SF3B1-211ENST00000487698 GRM1Q13255 1194 aa10.28□□□□□ -0.76
SF3B1-211ENST00000487698 PTPN14Q15678 1187 aa10.28□□□□□ -0.76
SF3B1-211ENST00000487698 EFCAB12Q6NXP0 572 aa10.28□□□□□ -0.76
SF3B1-211ENST00000487698 RRAGAQ7L523 313 aa10.28□□□□□ -0.76
SF3B1-211ENST00000487698 CACNA2D4Q7Z3S7 1137 aa10.28□□□□□ -0.76
SF3B1-211ENST00000487698 TLK2Q86UE8 772 aa10.28□□□□□ -0.76
SF3B1-211ENST00000487698 GPD1LQ8N335 351 aa10.28□□□□□ -0.76
SF3B1-211ENST00000487698 ZBTB10Q96DT7 871 aa10.28□□□□□ -0.76
SF3B1-211ENST00000487698 BICD1Q96G01 975 aa10.28□□□□□ -0.76
SF3B1-211ENST00000487698 MFSD14AQ96MC6 490 aa10.28□□□□□ -0.76
SF3B1-211ENST00000487698 ARHGAP39Q9C0H5 1083 aa10.28□□□□□ -0.76
SF3B1-211ENST00000487698 HAPLN2Q9GZV7 340 aa10.28□□□□□ -0.76
SF3B1-211ENST00000487698 NLRC4Q9NPP4 1024 aa10.28□□□□□ -0.76
SF3B1-211ENST00000487698 ZNHIT6Q9NWK9 470 aaKnown RBP10.28□□□□□ -0.76
SF3B1-211ENST00000487698 SUCLA2Q9P2R7 463 aaPredicted RBP10.28□□□□□ -0.76
SF3B1-211ENST00000487698 GOLGA6L9A6NEM1 432 aa10.28□□□□□ -0.76
SF3B1-211ENST00000487698 P4HA2O15460 535 aa10.28□□□□□ -0.76
SF3B1-211ENST00000487698 MAGEB2O15479 319 aa10.28□□□□□ -0.76
SF3B1-211ENST00000487698 AOC2O75106 756 aa10.28□□□□□ -0.76
SF3B1-211ENST00000487698 N4BP1O75113 896 aaKnown RBP10.28□□□□□ -0.76
SF3B1-211ENST00000487698 F2P00734 622 aa10.28□□□□□ -0.76
SF3B1-211ENST00000487698 UCHL3P15374 230 aa10.28□□□□□ -0.76
SF3B1-211ENST00000487698 CYP24A1Q07973 514 aa10.28□□□□□ -0.76
SF3B1-211ENST00000487698 HGSNATQ68CP4 663 aa10.28□□□□□ -0.76
SF3B1-211ENST00000487698 ZPBP2Q6X784 338 aa10.28□□□□□ -0.76
SF3B1-211ENST00000487698 REM2Q8IYK8 340 aaPredicted RBP10.28□□□□□ -0.76
SF3B1-211ENST00000487698 RNF149Q8NC42 400 aa10.28□□□□□ -0.76
SF3B1-211ENST00000487698 LMO3Q8TAP4 145 aa10.28□□□□□ -0.76
SF3B1-211ENST00000487698 TMC2Q8TDI7 906 aa10.28□□□□□ -0.76
SF3B1-211ENST00000487698 PARD3BQ8TEW8 1205 aa10.28□□□□□ -0.76
SF3B1-211ENST00000487698 LENG1Q96BZ8 264 aaPredicted RBP10.28□□□□□ -0.76
SF3B1-211ENST00000487698 CAPNS2Q96L46 248 aa10.28□□□□□ -0.76
SF3B1-211ENST00000487698 NFKBIZQ9BYH8 718 aa10.28□□□□□ -0.76
SF3B1-211ENST00000487698 C2orf40Q9H1Z8 148 aa10.28□□□□□ -0.76
SF3B1-211ENST00000487698 ARHGAP20Q9P2F6 1191 aa10.28□□□□□ -0.76
SF3B1-211ENST00000487698 MYO6Q9UM54 1294 aa10.28□□□□□ -0.76
SF3B1-211ENST00000487698 REXO2Q9Y3B8 237 aaKnown RBP10.28□□□□□ -0.76
SF3B1-211ENST00000487698 Q9Y3F1 56 aa10.28□□□□□ -0.76
SF3B1-211ENST00000487698 FHOD1Q9Y613 1164 aa10.28□□□□□ -0.76
SF3B1-211ENST00000487698 EPN1Q9Y6I3 576 aaPredicted RBP10.28□□□□□ -0.76
SF3B1-211ENST00000487698 THSD7BQ9C0I4 1608 aa10.28□□□□□ -0.76
SF3B1-211ENST00000487698 TRIP12Q14669 1992 aaPredicted RBP10.27□□□□□ -0.77
SF3B1-211ENST00000487698 KIF2AO00139 706 aaPredicted RBP10.27□□□□□ -0.77
SF3B1-211ENST00000487698 ASAP2O43150 1006 aa10.27□□□□□ -0.77
SF3B1-211ENST00000487698 DYNC1LI2O43237 492 aaPredicted RBP10.27□□□□□ -0.77
SF3B1-211ENST00000487698 EXTL3O43909 919 aa10.27□□□□□ -0.77
SF3B1-211ENST00000487698 TNNT1P13805 278 aa10.27□□□□□ -0.77
SF3B1-211ENST00000487698 KLRC1P26715 233 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms