RNA–Protein interactions for RNA: ENST00000486995.5

PTCD2-204, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 2

Gene PTCD2, Length 2,648 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-204ENST00000486995 RAVER2Q9HCJ3 691 aaKnown RBP13.33□□□□□ -0.28
PTCD2-204ENST00000486995 GPRC5CQ9NQ84 441 aa13.33□□□□□ -0.28
PTCD2-204ENST00000486995 ALG6Q9Y672 507 aa13.33□□□□□ -0.28
PTCD2-204ENST00000486995 ASTN2O75129 1339 aaPredicted RBP13.33□□□□□ -0.28
PTCD2-204ENST00000486995 WNT10BO00744 389 aa13.33□□□□□ -0.28
PTCD2-204ENST00000486995 FTLP02792 175 aaPredicted RBP13.33□□□□□ -0.28
PTCD2-204ENST00000486995 DGKZQ13574 1117 aa13.33□□□□□ -0.28
PTCD2-204ENST00000486995 RHOT2Q8IXI1 618 aa13.33□□□□□ -0.28
PTCD2-204ENST00000486995 AGBL3Q8NEM8 1001 aa13.33□□□□□ -0.28
PTCD2-204ENST00000486995 KAT5Q92993 513 aa13.33□□□□□ -0.28
PTCD2-204ENST00000486995 TMEM117Q9H0C3 514 aa13.33□□□□□ -0.28
PTCD2-204ENST00000486995 TBC1D22BQ9NU19 505 aa13.33□□□□□ -0.28
PTCD2-204ENST00000486995 BACH1O14867 736 aa13.32□□□□□ -0.28
PTCD2-204ENST00000486995 WDR46O15213 610 aaKnown RBP13.32□□□□□ -0.28
PTCD2-204ENST00000486995 MAPK13O15264 365 aa13.32□□□□□ -0.28
PTCD2-204ENST00000486995 ATP9AO75110 1047 aa13.32□□□□□ -0.28
PTCD2-204ENST00000486995 MCCD1P59942 119 aaPredicted RBP13.32□□□□□ -0.28
PTCD2-204ENST00000486995 PTENP60484 403 aa13.32□□□□□ -0.28
PTCD2-204ENST00000486995 GUCY1A3Q02108 690 aa13.32□□□□□ -0.28
PTCD2-204ENST00000486995 PRPF4BQ13523 1007 aaKnown RBP13.32□□□□□ -0.28
PTCD2-204ENST00000486995 TCEAL1Q15170 157 aa13.32□□□□□ -0.28
PTCD2-204ENST00000486995 RPUSD2Q8IZ73 545 aaKnown RBP13.32□□□□□ -0.28
PTCD2-204ENST00000486995 VTI1AQ96AJ9 217 aa13.32□□□□□ -0.28
PTCD2-204ENST00000486995 SLC38A10Q9HBR0 1119 aa13.32□□□□□ -0.28
PTCD2-204ENST00000486995 ERVK-5Q9HDB9 667 aa13.32□□□□□ -0.28
PTCD2-204ENST00000486995 HOMER2Q9NSB8 354 aa13.32□□□□□ -0.28
PTCD2-204ENST00000486995 UTP11Q9Y3A2 253 aaKnown RBP13.32□□□□□ -0.28
PTCD2-204ENST00000486995 LOXHD1Q8IVV2 1947 aa13.32□□□□□ -0.28
PTCD2-204ENST00000486995 EBAG9O00559 213 aa13.32□□□□□ -0.28
PTCD2-204ENST00000486995 PMM2O15305 246 aa13.32□□□□□ -0.28
PTCD2-204ENST00000486995 SLC16A4O15374 487 aa13.32□□□□□ -0.28
PTCD2-204ENST00000486995 EIF2AK2P19525 551 aaKnown RBP13.32□□□□□ -0.28
PTCD2-204ENST00000486995 CTNNA1P35221 906 aaKnown RBP13.32□□□□□ -0.28
PTCD2-204ENST00000486995 NCKAP1LP55160 1127 aa13.32□□□□□ -0.28
PTCD2-204ENST00000486995 PEX3P56589 373 aa13.32□□□□□ -0.28
PTCD2-204ENST00000486995 ZNF844Q08AG5 666 aa13.32□□□□□ -0.28
PTCD2-204ENST00000486995 ZNF211Q13398 564 aaPredicted RBP13.32□□□□□ -0.28
PTCD2-204ENST00000486995 C4orf19Q8IY42 314 aa13.32□□□□□ -0.28
PTCD2-204ENST00000486995 PCDHB18PQ96TA0 734 aa13.32□□□□□ -0.28
PTCD2-204ENST00000486995 TRIM51Q9BSJ1 452 aa13.32□□□□□ -0.28
PTCD2-204ENST00000486995 FAM114A2Q9NRY5 505 aa13.32□□□□□ -0.28
PTCD2-204ENST00000486995 ZNRF3Q9ULT6 936 aa13.32□□□□□ -0.28
PTCD2-204ENST00000486995 USP20Q9Y2K6 914 aa13.32□□□□□ -0.28
PTCD2-204ENST00000486995 SGPL1O95470 568 aa13.31□□□□□ -0.28
PTCD2-204ENST00000486995 ADRB2P07550 413 aa13.31□□□□□ -0.28
PTCD2-204ENST00000486995 CHRNB2P17787 502 aa13.31□□□□□ -0.28
PTCD2-204ENST00000486995 VCAM1P19320 739 aa13.31□□□□□ -0.28
PTCD2-204ENST00000486995 ADSSP30520 456 aa13.31□□□□□ -0.28
PTCD2-204ENST00000486995 LSP1P33241 339 aa13.31□□□□□ -0.28
PTCD2-204ENST00000486995 COPB2P35606 906 aa13.31□□□□□ -0.28
PTCD2-204ENST00000486995 SNRPFP62306 86 aaKnown RBP13.31□□□□□ -0.28
PTCD2-204ENST00000486995 RPS6P62753 249 aaKnown RBP13.31□□□□□ -0.28
PTCD2-204ENST00000486995 PGM5Q15124 567 aa13.31□□□□□ -0.28
PTCD2-204ENST00000486995 TRMT1LQ7Z2T5 733 aaKnown RBP13.31□□□□□ -0.28
PTCD2-204ENST00000486995 TMC3Q7Z5M5 1100 aa13.31□□□□□ -0.28
PTCD2-204ENST00000486995 ADAT2Q7Z6V5 191 aaKnown RBP13.31□□□□□ -0.28
PTCD2-204ENST00000486995 ATP8B4Q8TF62 1192 aa13.31□□□□□ -0.28
PTCD2-204ENST00000486995 LPAR1Q92633 364 aa13.31□□□□□ -0.28
PTCD2-204ENST00000486995 DPH5Q9H2P9 285 aa13.31□□□□□ -0.28
PTCD2-204ENST00000486995 TMOD4Q9NZQ9 345 aa13.31□□□□□ -0.28
PTCD2-204ENST00000486995 CTTNBP2NLQ9P2B4 639 aa13.31□□□□□ -0.28
PTCD2-204ENST00000486995 GOLGA8IPA6NC78 632 aa13.31□□□□□ -0.28
PTCD2-204ENST00000486995 GOLGA8JA6NMD2 632 aa13.31□□□□□ -0.28
PTCD2-204ENST00000486995 ZEB2O60315 1214 aa13.31□□□□□ -0.28
PTCD2-204ENST00000486995 CCNE2O96020 404 aa13.31□□□□□ -0.28
PTCD2-204ENST00000486995 MYZAPP0CAP1 466 aa13.31□□□□□ -0.28
PTCD2-204ENST00000486995 KCNA3P22001 575 aa13.31□□□□□ -0.28
PTCD2-204ENST00000486995 MAGEA9P43362 315 aa13.31□□□□□ -0.28
PTCD2-204ENST00000486995 MXI1P50539 228 aa13.31□□□□□ -0.28
PTCD2-204ENST00000486995 GPC5P78333 572 aa13.31□□□□□ -0.28
PTCD2-204ENST00000486995 SLC20A2Q08357 652 aa13.31□□□□□ -0.28
PTCD2-204ENST00000486995 C11orf63Q6NUN7 778 aa13.31□□□□□ -0.28
PTCD2-204ENST00000486995 ZNF746Q6NUN9 644 aaPredicted RBP13.31□□□□□ -0.28
PTCD2-204ENST00000486995 AADACL2Q6P093 401 aa13.31□□□□□ -0.28
PTCD2-204ENST00000486995 FAM71AQ8IYT1 594 aa13.31□□□□□ -0.28
PTCD2-204ENST00000486995 NAP1L3Q99457 506 aaPredicted RBP13.31□□□□□ -0.28
PTCD2-204ENST00000486995 TIPINQ9BVW5 301 aa13.31□□□□□ -0.28
PTCD2-204ENST00000486995 MAP3K20Q9NYL2 800 aaKnown RBP13.31□□□□□ -0.28
PTCD2-204ENST00000486995 NOCTQ9UK39 431 aaKnown RBP13.31□□□□□ -0.28
PTCD2-204ENST00000486995 GOLGA6L10A6NI86 522 aa13.3□□□□□ -0.28
PTCD2-204ENST00000486995 MYO1FO00160 1098 aa13.3□□□□□ -0.28
PTCD2-204ENST00000486995 PSMC5P62195 406 aa13.3□□□□□ -0.28
PTCD2-204ENST00000486995 TBC1D10BQ4KMP7 808 aaPredicted RBP13.3□□□□□ -0.28
PTCD2-204ENST00000486995 NOP9Q86U38 636 aaKnown RBP13.3□□□□□ -0.28
PTCD2-204ENST00000486995 CBWD2Q8IUF1 395 aa13.3□□□□□ -0.28
PTCD2-204ENST00000486995 EPS8L1Q8TE68 723 aa13.3□□□□□ -0.28
PTCD2-204ENST00000486995 UBLCP1Q8WVY7 318 aaPredicted RBP13.3□□□□□ -0.28
PTCD2-204ENST00000486995 KRT35Q92764 455 aa13.3□□□□□ -0.28
PTCD2-204ENST00000486995 KREMEN1Q96MU8 473 aa13.3□□□□□ -0.28
PTCD2-204ENST00000486995 PDGFDQ9GZP0 370 aaPredicted RBP13.3□□□□□ -0.28
PTCD2-204ENST00000486995 KIAA1683Q9H0B3 1180 aa13.3□□□□□ -0.28
PTCD2-204ENST00000486995 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.3□□□□□ -0.285e-17■■■■■ 409.9
PTCD2-204ENST00000486995 CHORDC1Q9UHD1 332 aaPredicted RBP13.3□□□□□ -0.28
PTCD2-204ENST00000486995 ANKRD63C9JTQ0 380 aa13.3□□□□□ -0.28
PTCD2-204ENST00000486995 RTN2O75298 545 aa13.3□□□□□ -0.28
PTCD2-204ENST00000486995 MYCLP12524 364 aaPredicted RBP13.3□□□□□ -0.28
PTCD2-204ENST00000486995 USP8P40818 1118 aa13.3□□□□□ -0.28
PTCD2-204ENST00000486995 MDH1P40925 334 aaKnown RBP13.3□□□□□ -0.28
PTCD2-204ENST00000486995 DR1Q01658 176 aa13.3□□□□□ -0.28
PTCD2-204ENST00000486995 CXCL9Q07325 125 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms