RNA–Protein interactions for RNA: ENST00000486023.1

COL6A1-204, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 2

Gene COL6A1, Length 968 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-204ENST00000486023 TMC7Q7Z402 723 aa19.57■□□□□ 0.72
COL6A1-204ENST00000486023 URGCPQ8TCY9 931 aa19.57■□□□□ 0.72
COL6A1-204ENST00000486023 MRPS27Q92552 414 aaKnown RBP19.57■□□□□ 0.72
COL6A1-204ENST00000486023 PLIN2Q99541 437 aa19.57■□□□□ 0.72
COL6A1-204ENST00000486023 TCF25Q9BQ70 676 aa19.57■□□□□ 0.72
COL6A1-204ENST00000486023 TRAIPQ9BWF2 469 aa19.57■□□□□ 0.72
COL6A1-204ENST00000486023 EIF2AQ9BY44 585 aaKnown RBP19.57■□□□□ 0.72
COL6A1-204ENST00000486023 TRIM6Q9C030 488 aaPredicted RBP19.57■□□□□ 0.72
COL6A1-204ENST00000486023 MYO7AQ13402 2215 aa19.56■□□□□ 0.72
COL6A1-204ENST00000486023 VWA3AA6NCI4 1184 aa19.56■□□□□ 0.72
COL6A1-204ENST00000486023 E9PMD0 336 aa19.56■□□□□ 0.72
COL6A1-204ENST00000486023 LAD1O00515 517 aa19.56■□□□□ 0.72
COL6A1-204ENST00000486023 B4GALT5O43286 388 aa19.56■□□□□ 0.72
COL6A1-204ENST00000486023 NCK2O43639 380 aa19.56■□□□□ 0.72
COL6A1-204ENST00000486023 ZNF623O75123 536 aa19.56■□□□□ 0.72
COL6A1-204ENST00000486023 IL9P15248 144 aa19.56■□□□□ 0.72
COL6A1-204ENST00000486023 CYP11B2P19099 503 aa19.56■□□□□ 0.72
COL6A1-204ENST00000486023 UBE3AQ05086 875 aa19.56■□□□□ 0.72
COL6A1-204ENST00000486023 AGMOQ6ZNB7 445 aa19.56■□□□□ 0.72
COL6A1-204ENST00000486023 ZBTB8OSQ8IWT0 167 aa19.56■□□□□ 0.72
COL6A1-204ENST00000486023 FAM193BQ96PV7 902 aaPredicted RBP19.56■□□□□ 0.72
COL6A1-204ENST00000486023 RNF39Q9H2S5 420 aa19.56■□□□□ 0.72
COL6A1-204ENST00000486023 RSAD1Q9HA92 442 aa19.56■□□□□ 0.72
COL6A1-204ENST00000486023 TBC1D13Q9NVG8 400 aa19.56■□□□□ 0.72
COL6A1-204ENST00000486023 DNM3Q9UQ16 869 aa19.56■□□□□ 0.72
COL6A1-204ENST00000486023 HES2Q9Y543 173 aa19.56■□□□□ 0.72
COL6A1-204ENST00000486023 RALGAPA2Q2PPJ7 1873 aa19.56■□□□□ 0.72
COL6A1-204ENST00000486023 SSBP05455 408 aaKnown RBP eCLIP19.55■□□□□ 0.72
COL6A1-204ENST00000486023 PPM1AP35813 382 aa19.55■□□□□ 0.72
COL6A1-204ENST00000486023 AFF1P51825 1210 aaKnown RBP19.55■□□□□ 0.72
COL6A1-204ENST00000486023 IGSF22Q8N9C0 903 aa19.55■□□□□ 0.72
COL6A1-204ENST00000486023 CSRNP2Q9H175 543 aa19.55■□□□□ 0.72
COL6A1-204ENST00000486023 NRDE2Q9H7Z3 1164 aa19.55■□□□□ 0.72
COL6A1-204ENST00000486023 USP20Q9Y2K6 914 aa19.55■□□□□ 0.72
COL6A1-204ENST00000486023 IPPQ9Y573 584 aa19.55■□□□□ 0.72
COL6A1-204ENST00000486023 STK24Q9Y6E0 443 aa19.55■□□□□ 0.72
COL6A1-204ENST00000486023 TCF20Q9UGU0 1960 aaKnown RBP19.55■□□□□ 0.72
COL6A1-204ENST00000486023 NPTXRO95502 500 aa19.54■□□□□ 0.72
COL6A1-204ENST00000486023 ARF4P18085 180 aaPredicted RBP19.54■□□□□ 0.72
COL6A1-204ENST00000486023 AXLP30530 894 aa19.54■□□□□ 0.72
COL6A1-204ENST00000486023 LTBRP36941 435 aa19.54■□□□□ 0.72
COL6A1-204ENST00000486023 PLCB3Q01970 1234 aa19.54■□□□□ 0.72
COL6A1-204ENST00000486023 POU5F1BQ06416 359 aa19.54■□□□□ 0.72
COL6A1-204ENST00000486023 ADAM15Q13444 863 aa19.54■□□□□ 0.72
COL6A1-204ENST00000486023 MRPL10Q7Z7H8 261 aaKnown RBP19.54■□□□□ 0.72
COL6A1-204ENST00000486023 ZNF280BQ86YH2 543 aa19.54■□□□□ 0.72
COL6A1-204ENST00000486023 SLC39A11Q8N1S5 342 aa19.54■□□□□ 0.72
COL6A1-204ENST00000486023 SMG8Q8ND04 991 aaKnown RBP19.54■□□□□ 0.72
COL6A1-204ENST00000486023 DEPTORQ8TB45 409 aa19.54■□□□□ 0.72
COL6A1-204ENST00000486023 BSNDQ8WZ55 320 aa19.54■□□□□ 0.72
COL6A1-204ENST00000486023 TMEM169Q96HH4 297 aa19.54■□□□□ 0.72
COL6A1-204ENST00000486023 DNAJB4Q9UDY4 337 aa19.54■□□□□ 0.72
COL6A1-204ENST00000486023 FNDC1Q4ZHG4 1894 aaPredicted RBP19.54■□□□□ 0.72
COL6A1-204ENST00000486023 GRXCR2A6NFK2 248 aa19.53■□□□□ 0.72
COL6A1-204ENST00000486023 NCLP19338 710 aaKnown RBP19.53■□□□□ 0.72
COL6A1-204ENST00000486023 MUTP22033 750 aa19.53■□□□□ 0.72
COL6A1-204ENST00000486023 AKAP5P24588 427 aa19.53■□□□□ 0.72
COL6A1-204ENST00000486023 SSTR3P32745 418 aaPredicted RBP19.53■□□□□ 0.72
COL6A1-204ENST00000486023 PRPHP41219 470 aa19.53■□□□□ 0.72
COL6A1-204ENST00000486023 RBM10P98175 930 aaKnown RBP19.53■□□□□ 0.72
COL6A1-204ENST00000486023 PCBP1Q15365 356 aaKnown RBP eCLIP19.53■□□□□ 0.72
COL6A1-204ENST00000486023 AMHR2Q16671 573 aa19.53■□□□□ 0.72
COL6A1-204ENST00000486023 LLGL2Q6P1M3 1020 aa19.53■□□□□ 0.72
COL6A1-204ENST00000486023 CNNM3Q8NE01 707 aa19.53■□□□□ 0.72
COL6A1-204ENST00000486023 IFT74Q96LB3 600 aa19.53■□□□□ 0.72
COL6A1-204ENST00000486023 KIFC3Q9BVG8 833 aa19.53■□□□□ 0.72
COL6A1-204ENST00000486023 PARP2Q9UGN5 583 aa19.53■□□□□ 0.72
COL6A1-204ENST00000486023 BARX2Q9UMQ3 279 aaPredicted RBP19.53■□□□□ 0.72
COL6A1-204ENST00000486023 CCDC169A6NNP5 214 aa19.52■□□□□ 0.72
COL6A1-204ENST00000486023 HIDE1A8MVS5 230 aa19.52■□□□□ 0.72
COL6A1-204ENST00000486023 TBX10O75333 385 aa19.52■□□□□ 0.72
COL6A1-204ENST00000486023 DDHD2O94830 711 aa19.52■□□□□ 0.72
COL6A1-204ENST00000486023 GALTP07902 379 aa19.52■□□□□ 0.72
COL6A1-204ENST00000486023 ATP2C1P98194 919 aaPredicted RBP19.52■□□□□ 0.72
COL6A1-204ENST00000486023 RAD51AP2Q09MP3 1159 aa19.52■□□□□ 0.72
COL6A1-204ENST00000486023 CUL4AQ13619 759 aa19.52■□□□□ 0.72
COL6A1-204ENST00000486023 CTC1Q2NKJ3 1217 aa19.52■□□□□ 0.72
COL6A1-204ENST00000486023 TMEM173Q86WV6 379 aaPredicted RBP19.52■□□□□ 0.72
COL6A1-204ENST00000486023 IFNLR1Q8IU57 520 aaPredicted RBP19.52■□□□□ 0.72
COL6A1-204ENST00000486023 TMEM87AQ8NBN3 555 aa19.52■□□□□ 0.72
COL6A1-204ENST00000486023 CDK5RAP3Q96JB5 506 aa19.52■□□□□ 0.72
COL6A1-204ENST00000486023 GAD1Q99259 594 aa19.52■□□□□ 0.72
COL6A1-204ENST00000486023 NFKBIZQ9BYH8 718 aa19.52■□□□□ 0.72
COL6A1-204ENST00000486023 PRMT7Q9NVM4 692 aaPredicted RBP19.52■□□□□ 0.72
COL6A1-204ENST00000486023 KLK14Q9P0G3 267 aa19.52■□□□□ 0.72
COL6A1-204ENST00000486023 LZTS1Q9Y250 596 aa19.52■□□□□ 0.72
COL6A1-204ENST00000486023 EYA4O95677 639 aa19.51■□□□□ 0.71
COL6A1-204ENST00000486023 CXCL14O95715 111 aa19.51■□□□□ 0.71
COL6A1-204ENST00000486023 ALDH2P05091 517 aa19.51■□□□□ 0.71
COL6A1-204ENST00000486023 MLH1P40692 756 aa19.51■□□□□ 0.71
COL6A1-204ENST00000486023 SLC11A1P49279 550 aa19.51■□□□□ 0.71
COL6A1-204ENST00000486023 PRPF4BQ13523 1007 aaKnown RBP19.51■□□□□ 0.71
COL6A1-204ENST00000486023 MAPK6Q16659 721 aa19.51■□□□□ 0.71
COL6A1-204ENST00000486023 PUS10Q3MIT2 529 aaKnown RBP19.51■□□□□ 0.71
COL6A1-204ENST00000486023 SLC27A1Q6PCB7 646 aa19.51■□□□□ 0.71
COL6A1-204ENST00000486023 HACE1Q8IYU2 909 aa19.51■□□□□ 0.71
COL6A1-204ENST00000486023 VPS52Q8N1B4 723 aa19.51■□□□□ 0.71
COL6A1-204ENST00000486023 EFHBQ8N7U6 833 aa19.51■□□□□ 0.71
COL6A1-204ENST00000486023 AUTS2Q8WXX7 1259 aa19.51■□□□□ 0.71
COL6A1-204ENST00000486023 CCDC51Q96ER9 411 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms