RNA–Protein interactions for RNA: ENST00000485530.5

TRA2B-213, Transcript of transformer 2 beta homolog, humanhuman

TSL 2

Gene TRA2B, Length 839 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-213ENST00000485530 SQORQ9Y6N5 450 aa13.52□□□□□ -0.25
TRA2B-213ENST00000485530 COL4A4P53420 1690 aaPredicted RBP13.51□□□□□ -0.25
TRA2B-213ENST00000485530 FRMD3A2A2Y4 597 aa13.51□□□□□ -0.25
TRA2B-213ENST00000485530 ZBBXA8MT70 800 aa13.51□□□□□ -0.25
TRA2B-213ENST00000485530 KLRC4O43908 158 aa13.51□□□□□ -0.25
TRA2B-213ENST00000485530 MGEA5O60502 916 aa13.51□□□□□ -0.25
TRA2B-213ENST00000485530 RPLP2P05387 115 aaKnown RBP13.51□□□□□ -0.25
TRA2B-213ENST00000485530 PLS3P13797 630 aa13.51□□□□□ -0.25
TRA2B-213ENST00000485530 HOXA11P31270 313 aaPredicted RBP13.51□□□□□ -0.25
TRA2B-213ENST00000485530 CDC42EP1Q00587 391 aa13.51□□□□□ -0.25
TRA2B-213ENST00000485530 MBTD1Q05BQ5 628 aa13.51□□□□□ -0.25
TRA2B-213ENST00000485530 AMHR2Q16671 573 aa13.51□□□□□ -0.25
TRA2B-213ENST00000485530 GPT2Q8TD30 523 aa13.51□□□□□ -0.25
TRA2B-213ENST00000485530 ERCC4Q92889 916 aaPredicted RBP13.51□□□□□ -0.25
TRA2B-213ENST00000485530 DRC1Q96MC2 740 aa13.51□□□□□ -0.25
TRA2B-213ENST00000485530 GBP4Q96PP9 640 aa13.51□□□□□ -0.25
TRA2B-213ENST00000485530 GCOM2Q9BZD3 368 aaPredicted RBP13.51□□□□□ -0.25
TRA2B-213ENST00000485530 CERS4Q9HA82 394 aa13.51□□□□□ -0.25
TRA2B-213ENST00000485530 DACT1Q9NYF0 836 aa13.51□□□□□ -0.25
TRA2B-213ENST00000485530 ODF2LQ9ULJ1 636 aa13.51□□□□□ -0.25
TRA2B-213ENST00000485530 SCN5AQ14524 2016 aa13.51□□□□□ -0.25
TRA2B-213ENST00000485530 LRRIQ4A6NIV6 560 aa13.5□□□□□ -0.25
TRA2B-213ENST00000485530 M0QZ92 97 aa13.5□□□□□ -0.25
TRA2B-213ENST00000485530 SLC16A4O15374 487 aa13.5□□□□□ -0.25
TRA2B-213ENST00000485530 RPS6KA5O75582 802 aa13.5□□□□□ -0.25
TRA2B-213ENST00000485530 KRT18P05783 430 aaKnown RBP13.5□□□□□ -0.25
TRA2B-213ENST00000485530 NMT1P30419 496 aaKnown RBP13.5□□□□□ -0.25
TRA2B-213ENST00000485530 MCM4P33991 863 aa13.5□□□□□ -0.25
TRA2B-213ENST00000485530 RFC2P35250 354 aa13.5□□□□□ -0.25
TRA2B-213ENST00000485530 NAMPTP43490 491 aa13.5□□□□□ -0.25
TRA2B-213ENST00000485530 EHHADHQ08426 723 aa13.5□□□□□ -0.25
TRA2B-213ENST00000485530 CDCA2Q69YH5 1023 aaPredicted RBP13.5□□□□□ -0.25
TRA2B-213ENST00000485530 TSHZ1Q6ZSZ6 1077 aa13.5□□□□□ -0.25
TRA2B-213ENST00000485530 CEP57L1Q8IYX8 460 aa13.5□□□□□ -0.25
TRA2B-213ENST00000485530 ZNF710Q8N1W2 664 aa13.5□□□□□ -0.25
TRA2B-213ENST00000485530 MYCT1Q8N699 235 aa13.5□□□□□ -0.25
TRA2B-213ENST00000485530 TMEM161BQ8NDZ6 487 aa13.5□□□□□ -0.25
TRA2B-213ENST00000485530 CNNM3Q8NE01 707 aa13.5□□□□□ -0.25
TRA2B-213ENST00000485530 GLIS3Q8NEA6 775 aa13.5□□□□□ -0.25
TRA2B-213ENST00000485530 TET1Q8NFU7 2136 aa13.5□□□□□ -0.25
TRA2B-213ENST00000485530 SPIRE2Q8WWL2 714 aa13.5□□□□□ -0.25
TRA2B-213ENST00000485530 LINC01599Q8WXQ3 324 aa13.5□□□□□ -0.25
TRA2B-213ENST00000485530 TIGD1Q96MW7 591 aa13.5□□□□□ -0.25
TRA2B-213ENST00000485530 PYM1Q9BRP8 204 aaKnown RBP13.5□□□□□ -0.25
TRA2B-213ENST00000485530 STRA6Q9BX79 667 aa13.5□□□□□ -0.25
TRA2B-213ENST00000485530 NFKBIZQ9BYH8 718 aa13.5□□□□□ -0.25
TRA2B-213ENST00000485530 CCDC113Q9H0I3 377 aa13.5□□□□□ -0.25
TRA2B-213ENST00000485530 FZD8Q9H461 694 aa13.5□□□□□ -0.25
TRA2B-213ENST00000485530 PANK4Q9NVE7 773 aa13.5□□□□□ -0.25
TRA2B-213ENST00000485530 TBC1D7Q9P0N9 293 aa13.5□□□□□ -0.25
TRA2B-213ENST00000485530 ARHGAP28Q9P2N2 729 aa13.5□□□□□ -0.25
TRA2B-213ENST00000485530 SIP14410 1827 aa13.49□□□□□ -0.25
TRA2B-213ENST00000485530 CCDC169A6NNP5 214 aa13.49□□□□□ -0.25
TRA2B-213ENST00000485530 PI4K2BG5E9Z4 385 aa13.49□□□□□ -0.25
TRA2B-213ENST00000485530 ENPP3O14638 875 aa13.49□□□□□ -0.25
TRA2B-213ENST00000485530 B4GALT5O43286 388 aa13.49□□□□□ -0.25
TRA2B-213ENST00000485530 ARHGEF15O94989 841 aa13.49□□□□□ -0.25
TRA2B-213ENST00000485530 PARNO95453 639 aaKnown RBP13.49□□□□□ -0.25
TRA2B-213ENST00000485530 IDEP14735 1019 aa13.49□□□□□ -0.25
TRA2B-213ENST00000485530 CASP5P51878 434 aa13.49□□□□□ -0.25
TRA2B-213ENST00000485530 AMPD3Q01432 767 aa13.49□□□□□ -0.25
TRA2B-213ENST00000485530 DPYDQ12882 1025 aa13.49□□□□□ -0.25
TRA2B-213ENST00000485530 NFX1Q12986 1120 aaKnown RBP13.49□□□□□ -0.25
TRA2B-213ENST00000485530 TFDP1Q14186 410 aa13.49□□□□□ -0.25
TRA2B-213ENST00000485530 DSC3Q14574 896 aa13.49□□□□□ -0.25
TRA2B-213ENST00000485530 ZC2HC1CQ53FD0 456 aaPredicted RBP13.49□□□□□ -0.25
TRA2B-213ENST00000485530 ODR4Q5SWX8 454 aa13.49□□□□□ -0.25
TRA2B-213ENST00000485530 NT5DC1Q5TFE4 455 aa13.49□□□□□ -0.25
TRA2B-213ENST00000485530 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.49□□□□□ -0.25
TRA2B-213ENST00000485530 ZNF720Q7Z2F6 126 aa13.49□□□□□ -0.25
TRA2B-213ENST00000485530 SRGAP1Q7Z6B7 1085 aa13.49□□□□□ -0.25
TRA2B-213ENST00000485530 SFR1Q86XK3 245 aa13.49□□□□□ -0.25
TRA2B-213ENST00000485530 RPUSD2Q8IZ73 545 aaKnown RBP13.49□□□□□ -0.25
TRA2B-213ENST00000485530 HLA-CQ95604 372 aa13.49□□□□□ -0.25
TRA2B-213ENST00000485530 IFT74Q96LB3 600 aa13.49□□□□□ -0.25
TRA2B-213ENST00000485530 IFIH1Q9BYX4 1025 aaKnown RBP13.49□□□□□ -0.25
TRA2B-213ENST00000485530 IKZF4Q9H2S9 585 aa13.49□□□□□ -0.25
TRA2B-213ENST00000485530 ZHX3Q9H4I2 956 aa13.49□□□□□ -0.25
TRA2B-213ENST00000485530 C17orf75Q9HAS0 396 aa13.49□□□□□ -0.25
TRA2B-213ENST00000485530 MAGEF1Q9HAY2 307 aa13.49□□□□□ -0.25
TRA2B-213ENST00000485530 PARVGQ9HBI0 331 aa13.49□□□□□ -0.25
TRA2B-213ENST00000485530 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.48□□□□□ -0.25
TRA2B-213ENST00000485530 INO80B-WBP1J3KQ70 363 aa13.48□□□□□ -0.25
TRA2B-213ENST00000485530 TRAK2O60296 914 aa13.48□□□□□ -0.25
TRA2B-213ENST00000485530 FAM13AO94988 1023 aa13.48□□□□□ -0.25
TRA2B-213ENST00000485530 MAPTP10636 758 aaKnown RBP13.48□□□□□ -0.25
TRA2B-213ENST00000485530 HOXD13P35453 343 aa13.48□□□□□ -0.25
TRA2B-213ENST00000485530 PHKA2P46019 1235 aa13.48□□□□□ -0.25
TRA2B-213ENST00000485530 NCKAP1LP55160 1127 aa13.48□□□□□ -0.25
TRA2B-213ENST00000485530 KCNA1Q09470 495 aa13.48□□□□□ -0.25
TRA2B-213ENST00000485530 COASYQ13057 564 aa13.48□□□□□ -0.25
TRA2B-213ENST00000485530 PNOCQ13519 176 aa13.48□□□□□ -0.25
TRA2B-213ENST00000485530 HERC4Q5GLZ8 1057 aaPredicted RBP13.48□□□□□ -0.25
TRA2B-213ENST00000485530 HAUS6Q7Z4H7 955 aa13.48□□□□□ -0.25
TRA2B-213ENST00000485530 DEPTORQ8TB45 409 aa13.48□□□□□ -0.25
TRA2B-213ENST00000485530 SCLT1Q96NL6 688 aa13.48□□□□□ -0.25
TRA2B-213ENST00000485530 INO80BQ9C086 356 aaPredicted RBP13.48□□□□□ -0.25
TRA2B-213ENST00000485530 CD320Q9NPF0 282 aa13.48□□□□□ -0.25
TRA2B-213ENST00000485530 KMT5AQ9NQR1 393 aa13.48□□□□□ -0.25
TRA2B-213ENST00000485530 LARSQ9P2J5 1176 aaKnown RBP13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms