RNA–Protein interactions for RNA: ENST00000480353.5

CDK9-203, Transcript of cyclin dependent kinase 9, humanhuman

TSL 2

Gene CDK9, Length 706 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-203ENST00000480353 ASAP3Q8TDY4 903 aa17.01■□□□□ 0.31
CDK9-203ENST00000480353 SNX29Q8TEQ0 813 aa17.01■□□□□ 0.31
CDK9-203ENST00000480353 CCDC51Q96ER9 411 aa17.01■□□□□ 0.31
CDK9-203ENST00000480353 CPB2Q96IY4 423 aa17.01■□□□□ 0.31
CDK9-203ENST00000480353 TBC1D32Q96NH3 1257 aa17.01■□□□□ 0.31
CDK9-203ENST00000480353 CDCA3Q99618 268 aaPredicted RBP17.01■□□□□ 0.31
CDK9-203ENST00000480353 NGRNQ9NPE2 291 aaKnown RBP17.01■□□□□ 0.31
CDK9-203ENST00000480353 KANSL3Q9P2N6 904 aa17.01■□□□□ 0.31
CDK9-203ENST00000480353 PCDHB6Q9Y5E3 794 aa17.01■□□□□ 0.31
CDK9-203ENST00000480353 VCANP13611 3396 aa17.01■□□□□ 0.31
CDK9-203ENST00000480353 NT5C1B-RDH14C9J2C7 533 aa17■□□□□ 0.31
CDK9-203ENST00000480353 PER2O15055 1255 aa17■□□□□ 0.31
CDK9-203ENST00000480353 LINC01565O15544 149 aa17■□□□□ 0.31
CDK9-203ENST00000480353 MUTP22033 750 aa17■□□□□ 0.31
CDK9-203ENST00000480353 GLRA2P23416 452 aa17■□□□□ 0.31
CDK9-203ENST00000480353 ERVFC1P60507 584 aa17■□□□□ 0.31
CDK9-203ENST00000480353 ADAM15Q13444 863 aa17■□□□□ 0.31
CDK9-203ENST00000480353 SMC1AQ14683 1233 aaKnown RBP17■□□□□ 0.31
CDK9-203ENST00000480353 CTC1Q2NKJ3 1217 aa17■□□□□ 0.31
CDK9-203ENST00000480353 KRT79Q5XKE5 535 aa17■□□□□ 0.31
CDK9-203ENST00000480353 PADI6Q6TGC4 694 aa17■□□□□ 0.31
CDK9-203ENST00000480353 DTHD1Q6ZMT9 781 aa17■□□□□ 0.31
CDK9-203ENST00000480353 IFT74Q96LB3 600 aa17■□□□□ 0.31
CDK9-203ENST00000480353 APOL6Q9BWW8 343 aa17■□□□□ 0.31
CDK9-203ENST00000480353 TBC1D13Q9NVG8 400 aa17■□□□□ 0.31
CDK9-203ENST00000480353 PCDHGC5Q9Y5F6 944 aa17■□□□□ 0.31
CDK9-203ENST00000480353 TSPAN1O60635 241 aa16.99■□□□□ 0.31
CDK9-203ENST00000480353 OFD1O75665 1012 aa16.99■□□□□ 0.31
CDK9-203ENST00000480353 LIG1P18858 919 aa16.99■□□□□ 0.31
CDK9-203ENST00000480353 SMAD4Q13485 552 aaKnown RBP16.99■□□□□ 0.31
CDK9-203ENST00000480353 PDIA5Q14554 519 aa16.99■□□□□ 0.31
CDK9-203ENST00000480353 COL19A1Q14993 1142 aa16.99■□□□□ 0.31
CDK9-203ENST00000480353 PPP2R5AQ15172 486 aa16.99■□□□□ 0.31
CDK9-203ENST00000480353 ZRSR1Q15695 479 aaKnown RBP16.99■□□□□ 0.31
CDK9-203ENST00000480353 GJD3Q8N144 294 aa16.99■□□□□ 0.31
CDK9-203ENST00000480353 SLC39A11Q8N1S5 342 aa16.99■□□□□ 0.31
CDK9-203ENST00000480353 DEPTORQ8TB45 409 aa16.99■□□□□ 0.31
CDK9-203ENST00000480353 CSRNP2Q9H175 543 aa16.99■□□□□ 0.31
CDK9-203ENST00000480353 C2orf40Q9H1Z8 148 aa16.99■□□□□ 0.31
CDK9-203ENST00000480353 GPRC5CQ9NQ84 441 aa16.99■□□□□ 0.31
CDK9-203ENST00000480353 DDX19AQ9NUU7 478 aaKnown RBP16.99■□□□□ 0.31
CDK9-203ENST00000480353 PRMT7Q9NVM4 692 aaPredicted RBP16.99■□□□□ 0.31
CDK9-203ENST00000480353 KIAA1024Q9UPX6 916 aa16.99■□□□□ 0.31
CDK9-203ENST00000480353 XIRP2A4UGR9 3374 aa16.98■□□□□ 0.31
CDK9-203ENST00000480353 TDRD15B5MCY1 1934 aaKnown RBP16.98■□□□□ 0.31
CDK9-203ENST00000480353 MEIS3P2A8K0S8 358 aa16.98■□□□□ 0.31
CDK9-203ENST00000480353 TBX10O75333 385 aa16.98■□□□□ 0.31
CDK9-203ENST00000480353 NR1I2O75469 434 aa16.98■□□□□ 0.31
CDK9-203ENST00000480353 CD2BP2O95400 341 aaKnown RBP16.98■□□□□ 0.31
CDK9-203ENST00000480353 NCLP19338 710 aaKnown RBP16.98■□□□□ 0.31
CDK9-203ENST00000480353 HOXA11P31270 313 aaPredicted RBP16.98■□□□□ 0.31
CDK9-203ENST00000480353 LTBRP36941 435 aa16.98■□□□□ 0.31
CDK9-203ENST00000480353 MBTD1Q05BQ5 628 aa16.98■□□□□ 0.31
CDK9-203ENST00000480353 DLX2Q07687 328 aaPredicted RBP16.98■□□□□ 0.31
CDK9-203ENST00000480353 LARP1BQ659C4 914 aaKnown RBP16.98■□□□□ 0.31
CDK9-203ENST00000480353 MRPL10Q7Z7H8 261 aaKnown RBP16.98■□□□□ 0.31
CDK9-203ENST00000480353 IFNLR1Q8IU57 520 aaPredicted RBP16.98■□□□□ 0.31
CDK9-203ENST00000480353 FAM178BQ8IXR5 827 aa16.98■□□□□ 0.31
CDK9-203ENST00000480353 POP1Q99575 1024 aaKnown RBP16.98■□□□□ 0.31
CDK9-203ENST00000480353 C1QTNF1Q9BXJ1 281 aa16.98■□□□□ 0.31
CDK9-203ENST00000480353 NFKBIZQ9BYH8 718 aa16.98■□□□□ 0.31
CDK9-203ENST00000480353 NRDE2Q9H7Z3 1164 aa16.98■□□□□ 0.31
CDK9-203ENST00000480353 PRKAG3Q9UGI9 489 aa16.98■□□□□ 0.31
CDK9-203ENST00000480353 BARX2Q9UMQ3 279 aaPredicted RBP16.98■□□□□ 0.31
CDK9-203ENST00000480353 DNM3Q9UQ16 869 aa16.98■□□□□ 0.31
CDK9-203ENST00000480353 IPPQ9Y573 584 aa16.98■□□□□ 0.31
CDK9-203ENST00000480353 TTC28Q96AY4 2481 aa16.98■□□□□ 0.31
CDK9-203ENST00000480353 FSCN2O14926 492 aa16.97■□□□□ 0.31
CDK9-203ENST00000480353 MBTPS2O43462 519 aa16.97■□□□□ 0.31
CDK9-203ENST00000480353 POMCP01189 267 aa16.97■□□□□ 0.31
CDK9-203ENST00000480353 ARF4P18085 180 aaPredicted RBP16.97■□□□□ 0.31
CDK9-203ENST00000480353 CYP11B2P19099 503 aa16.97■□□□□ 0.31
CDK9-203ENST00000480353 TOB1P50616 345 aaPredicted RBP16.97■□□□□ 0.31
CDK9-203ENST00000480353 DUSP6Q16828 381 aa16.97■□□□□ 0.31
CDK9-203ENST00000480353 UBXN11Q5T124 520 aa16.97■□□□□ 0.31
CDK9-203ENST00000480353 LLGL2Q6P1M3 1020 aa16.97■□□□□ 0.31
CDK9-203ENST00000480353 SLC27A1Q6PCB7 646 aa16.97■□□□□ 0.31
CDK9-203ENST00000480353 VPS52Q8N1B4 723 aa16.97■□□□□ 0.31
CDK9-203ENST00000480353 CDK5RAP3Q96JB5 506 aa16.97■□□□□ 0.31
CDK9-203ENST00000480353 ADPGKQ9BRR6 497 aa16.97■□□□□ 0.31
CDK9-203ENST00000480353 EIF2AQ9BY44 585 aaKnown RBP16.97■□□□□ 0.31
CDK9-203ENST00000480353 BHMT2Q9H2M3 363 aa16.97■□□□□ 0.31
CDK9-203ENST00000480353 STK39Q9UEW8 545 aa16.97■□□□□ 0.31
CDK9-203ENST00000480353 PARP2Q9UGN5 583 aa16.97■□□□□ 0.31
CDK9-203ENST00000480353 FAN1Q9Y2M0 1017 aa16.97■□□□□ 0.31
CDK9-203ENST00000480353 NCOR1O75376 2440 aa16.97■□□□□ 0.31
CDK9-203ENST00000480353 SPDYE4A6NLX3 237 aa16.96■□□□□ 0.31
CDK9-203ENST00000480353 NPTXRO95502 500 aa16.96■□□□□ 0.31
CDK9-203ENST00000480353 CXCL14O95715 111 aa16.96■□□□□ 0.31
CDK9-203ENST00000480353 ALDH2P05091 517 aa16.96■□□□□ 0.31
CDK9-203ENST00000480353 PRPHP41219 470 aa16.96■□□□□ 0.31
CDK9-203ENST00000480353 GIT2Q14161 759 aa16.96■□□□□ 0.31
CDK9-203ENST00000480353 MAPK6Q16659 721 aa16.96■□□□□ 0.31
CDK9-203ENST00000480353 AGMOQ6ZNB7 445 aa16.96■□□□□ 0.31
CDK9-203ENST00000480353 C4orf32Q8N8J7 132 aa16.96■□□□□ 0.31
CDK9-203ENST00000480353 KIFAP3Q92845 792 aa16.96■□□□□ 0.31
CDK9-203ENST00000480353 PRIMPOLQ96LW4 560 aa16.96■□□□□ 0.31
CDK9-203ENST00000480353 RPS6KC1Q96S38 1066 aa16.96■□□□□ 0.31
CDK9-203ENST00000480353 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.96■□□□□ 0.31
CDK9-203ENST00000480353 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms