RNA–Protein interactions for RNA: ENST00000479080.1

CHD3-210, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 519 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-210ENST00000479080 NLRP7Q8WX94 980 aa14.4□□□□□ -0.1
CHD3-210ENST00000479080 ZBTB45Q96K62 511 aaPredicted RBP14.4□□□□□ -0.1
CHD3-210ENST00000479080 ACCSQ96QU6 501 aa14.4□□□□□ -0.1
CHD3-210ENST00000479080 TARS2Q9BW92 718 aaKnown RBP14.4□□□□□ -0.1
CHD3-210ENST00000479080 SEZ6LQ9BYH1 1024 aa14.4□□□□□ -0.1
CHD3-210ENST00000479080 CELF4Q9BZC1 486 aaKnown RBP14.4□□□□□ -0.1
CHD3-210ENST00000479080 GTPBP4Q9BZE4 634 aaKnown RBP14.4□□□□□ -0.1
CHD3-210ENST00000479080 C2orf40Q9H1Z8 148 aa14.4□□□□□ -0.1
CHD3-210ENST00000479080 TRAF3IP3Q9Y228 551 aa14.4□□□□□ -0.1
CHD3-210ENST00000479080 NOC2LQ9Y3T9 749 aaKnown RBP14.4□□□□□ -0.1
CHD3-210ENST00000479080 PCDHB13Q9Y5F0 798 aa14.4□□□□□ -0.1
CHD3-210ENST00000479080 KIAA0100Q14667 2235 aaKnown RBP14.39□□□□□ -0.11
CHD3-210ENST00000479080 FSD2A1L4K1 749 aa14.39□□□□□ -0.11
CHD3-210ENST00000479080 PSMA7O14818 248 aa14.39□□□□□ -0.11
CHD3-210ENST00000479080 CLIC2O15247 247 aa14.39□□□□□ -0.11
CHD3-210ENST00000479080 THPOP40225 353 aa14.39□□□□□ -0.11
CHD3-210ENST00000479080 PHKA2P46019 1235 aa14.39□□□□□ -0.11
CHD3-210ENST00000479080 CRYBB1P53674 252 aaPredicted RBP14.39□□□□□ -0.11
CHD3-210ENST00000479080 SRGAP1Q7Z6B7 1085 aa14.39□□□□□ -0.11
CHD3-210ENST00000479080 ZBTB8OSQ8IWT0 167 aa14.39□□□□□ -0.11
CHD3-210ENST00000479080 SLC17A8Q8NDX2 589 aa14.39□□□□□ -0.11
CHD3-210ENST00000479080 VWCEQ96DN2 955 aa14.39□□□□□ -0.11
CHD3-210ENST00000479080 CBWD1Q9BRT8 395 aa14.39□□□□□ -0.11
CHD3-210ENST00000479080 NOC4LQ9BVI4 516 aaKnown RBP14.39□□□□□ -0.11
CHD3-210ENST00000479080 AGO3Q9H9G7 860 aaKnown RBP14.39□□□□□ -0.11
CHD3-210ENST00000479080 PTPRHQ9HD43 1115 aa14.39□□□□□ -0.11
CHD3-210ENST00000479080 AGPAT3Q9NRZ7 376 aa14.39□□□□□ -0.11
CHD3-210ENST00000479080 TYW1Q9NV66 732 aaKnown RBP14.39□□□□□ -0.11
CHD3-210ENST00000479080 DMAC2Q9NW81 257 aa14.39□□□□□ -0.11
CHD3-210ENST00000479080 TBX21Q9UL17 535 aa14.39□□□□□ -0.11
CHD3-210ENST00000479080 KAT6AQ92794 2004 aa14.39□□□□□ -0.11
CHD3-210ENST00000479080 ALPK3Q96L96 1907 aa14.39□□□□□ -0.11
CHD3-210ENST00000479080 INO80B-WBP1J3KQ70 363 aa14.38□□□□□ -0.11
CHD3-210ENST00000479080 K7ERI5 159 aa14.38□□□□□ -0.11
CHD3-210ENST00000479080 ACKR2O00590 384 aa14.38□□□□□ -0.11
CHD3-210ENST00000479080 PDXKO00764 312 aa14.38□□□□□ -0.11
CHD3-210ENST00000479080 AP5Z1O43299 807 aa14.38□□□□□ -0.11
CHD3-210ENST00000479080 PROZP22891 400 aa14.38□□□□□ -0.11
CHD3-210ENST00000479080 EIF4BP23588 611 aaKnown RBP14.38□□□□□ -0.11
CHD3-210ENST00000479080 HOXA11P31270 313 aaPredicted RBP14.38□□□□□ -0.11
CHD3-210ENST00000479080 PPP1R2P41236 205 aa14.38□□□□□ -0.11
CHD3-210ENST00000479080 EFNA5P52803 228 aa14.38□□□□□ -0.11
CHD3-210ENST00000479080 MYL5Q02045 173 aa14.38□□□□□ -0.11
CHD3-210ENST00000479080 LPIN1Q14693 890 aa14.38□□□□□ -0.11
CHD3-210ENST00000479080 NFIL3Q16649 462 aa14.38□□□□□ -0.11
CHD3-210ENST00000479080 TCTN1Q2MV58 587 aa14.38□□□□□ -0.11
CHD3-210ENST00000479080 CT47A1Q5JQC4 288 aaPredicted RBP14.38□□□□□ -0.11
CHD3-210ENST00000479080 FBXO47Q5MNV8 452 aa14.38□□□□□ -0.11
CHD3-210ENST00000479080 FOXR2Q6PJQ5 311 aa14.38□□□□□ -0.11
CHD3-210ENST00000479080 NECAB2Q7Z6G3 386 aa14.38□□□□□ -0.11
CHD3-210ENST00000479080 CDR2LQ86X02 465 aaPredicted RBP14.38□□□□□ -0.11
CHD3-210ENST00000479080 C12orf56Q8IXR9 622 aa14.38□□□□□ -0.11
CHD3-210ENST00000479080 EEF2KMTQ96G04 330 aa14.38□□□□□ -0.11
CHD3-210ENST00000479080 ABHD8Q96I13 439 aa14.38□□□□□ -0.11
CHD3-210ENST00000479080 TOX2Q96NM4 488 aa14.38□□□□□ -0.11
CHD3-210ENST00000479080 ACO2Q99798 780 aaKnown RBP14.38□□□□□ -0.11
CHD3-210ENST00000479080 INO80BQ9C086 356 aaPredicted RBP14.38□□□□□ -0.11
CHD3-210ENST00000479080 GBP3Q9H0R5 595 aa14.38□□□□□ -0.11
CHD3-210ENST00000479080 WNT8AQ9H1J5 351 aa14.38□□□□□ -0.11
CHD3-210ENST00000479080 SAMSN1Q9NSI8 373 aaKnown RBP14.38□□□□□ -0.11
CHD3-210ENST00000479080 DACH1Q9UI36 760 aa14.38□□□□□ -0.11
CHD3-210ENST00000479080 NOD1Q9Y239 953 aa14.38□□□□□ -0.11
CHD3-210ENST00000479080 GINS2Q9Y248 185 aa14.38□□□□□ -0.11
CHD3-210ENST00000479080 ATP11BQ9Y2G3 1177 aa14.38□□□□□ -0.11
CHD3-210ENST00000479080 STYXL1Q9Y6J8 313 aa14.38□□□□□ -0.11
CHD3-210ENST00000479080 CNTNAP2Q9UHC6 1331 aa14.38□□□□□ -0.11
CHD3-210ENST00000479080 H0YCG3 227 aa14.37□□□□□ -0.11
CHD3-210ENST00000479080 IKBKBO14920 756 aa14.37□□□□□ -0.11
CHD3-210ENST00000479080 FAM189A1O60320 539 aa14.37□□□□□ -0.11
CHD3-210ENST00000479080 CAND2O75155 1236 aa14.37□□□□□ -0.11
CHD3-210ENST00000479080 ZNF18P17022 549 aa14.37□□□□□ -0.11
CHD3-210ENST00000479080 CAPN2P17655 700 aa14.37□□□□□ -0.11
CHD3-210ENST00000479080 ARF4P18085 180 aaPredicted RBP14.37□□□□□ -0.11
CHD3-210ENST00000479080 ITGB8P26012 769 aa14.37□□□□□ -0.11
CHD3-210ENST00000479080 CASP4P49662 377 aa14.37□□□□□ -0.11
CHD3-210ENST00000479080 STIM1Q13586 685 aa14.37□□□□□ -0.11
CHD3-210ENST00000479080 MAPK6Q16659 721 aa14.37□□□□□ -0.11
CHD3-210ENST00000479080 ZBTB41Q5SVQ8 909 aa14.37□□□□□ -0.11
CHD3-210ENST00000479080 CDKAL1Q5VV42 579 aa14.37□□□□□ -0.11
CHD3-210ENST00000479080 SPATA1Q5VX52 437 aa14.37□□□□□ -0.11
CHD3-210ENST00000479080 CPB2Q96IY4 423 aa14.37□□□□□ -0.11
CHD3-210ENST00000479080 GCOM2Q9BZD3 368 aaPredicted RBP14.37□□□□□ -0.11
CHD3-210ENST00000479080 PDZD7Q9H5P4 517 aa14.37□□□□□ -0.11
CHD3-210ENST00000479080 TMEM206Q9H813 350 aa14.37□□□□□ -0.11
CHD3-210ENST00000479080 ERVK-5Q9HDB9 667 aa14.37□□□□□ -0.11
CHD3-210ENST00000479080 PRMT7Q9NVM4 692 aaPredicted RBP14.37□□□□□ -0.11
CHD3-210ENST00000479080 FANCLQ9NW38 375 aa14.37□□□□□ -0.11
CHD3-210ENST00000479080 NFE2L3Q9Y4A8 694 aa14.37□□□□□ -0.11
CHD3-210ENST00000479080 TANC1Q9C0D5 1861 aa14.36□□□□□ -0.11
CHD3-210ENST00000479080 MEFVO15553 781 aaPredicted RBP14.36□□□□□ -0.11
CHD3-210ENST00000479080 NBNO60934 754 aa14.36□□□□□ -0.11
CHD3-210ENST00000479080 NR3C1P04150 777 aa14.36□□□□□ -0.11
CHD3-210ENST00000479080 GHRP10912 638 aa14.36□□□□□ -0.11
CHD3-210ENST00000479080 ATP1A3P13637 1013 aa14.36□□□□□ -0.11
CHD3-210ENST00000479080 LRRC63Q05C16 580 aa14.36□□□□□ -0.11
CHD3-210ENST00000479080 EDRF1Q3B7T1 1238 aa14.36□□□□□ -0.11
CHD3-210ENST00000479080 UBXN11Q5T124 520 aa14.36□□□□□ -0.11
CHD3-210ENST00000479080 ZPBP2Q6X784 338 aa14.36□□□□□ -0.11
CHD3-210ENST00000479080 TSHZ1Q6ZSZ6 1077 aa14.36□□□□□ -0.11
CHD3-210ENST00000479080 STXBP4Q6ZWJ1 553 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms