RNA–Protein interactions for RNA: ENST00000478934.5

VPS52-217, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 2,602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-217ENST00000478934 RIPK3Q9Y572 518 aa11.7□□□□□ -0.54
VPS52-217ENST00000478934 PHF20L1A8MW92 1017 aa11.69□□□□□ -0.54
VPS52-217ENST00000478934 P4HBP07237 508 aaKnown RBP11.69□□□□□ -0.54
VPS52-217ENST00000478934 TMEM253P0C7T8 217 aa11.69□□□□□ -0.54
VPS52-217ENST00000478934 ADSSP30520 456 aa11.69□□□□□ -0.54
VPS52-217ENST00000478934 SETQ01105 290 aaPredicted RBP11.69□□□□□ -0.54
VPS52-217ENST00000478934 EPC2Q52LR7 807 aa11.69□□□□□ -0.54
VPS52-217ENST00000478934 NSMFQ6X4W1 530 aa11.69□□□□□ -0.54
VPS52-217ENST00000478934 PHLDB2Q86SQ0 1253 aa11.69□□□□□ -0.54
VPS52-217ENST00000478934 TADA2BQ86TJ2 420 aa11.69□□□□□ -0.54
VPS52-217ENST00000478934 FAM160B2Q86V87 743 aa11.69□□□□□ -0.54
VPS52-217ENST00000478934 SLC47A2Q86VL8 602 aa11.69□□□□□ -0.54
VPS52-217ENST00000478934 SUPT20HQ8NEM7 779 aa11.69□□□□□ -0.54
VPS52-217ENST00000478934 DHX38Q92620 1227 aaKnown RBP11.69□□□□□ -0.54
VPS52-217ENST00000478934 RIT2Q99578 217 aa11.69□□□□□ -0.54
VPS52-217ENST00000478934 A0A0A6YYK5 440 aaPredicted RBP11.69□□□□□ -0.54
VPS52-217ENST00000478934 TCRBV7S2A1N4TA0A589 114 aa11.69□□□□□ -0.54
VPS52-217ENST00000478934 TESPA1A2RU30 521 aaPredicted RBP11.69□□□□□ -0.54
VPS52-217ENST00000478934 H0YGN5 161 aa11.69□□□□□ -0.54
VPS52-217ENST00000478934 CYP26A1O43174 497 aa11.69□□□□□ -0.54
VPS52-217ENST00000478934 KRT13P13646 458 aa11.69□□□□□ -0.54
VPS52-217ENST00000478934 HSPA9P38646 679 aaKnown RBP11.69□□□□□ -0.54
VPS52-217ENST00000478934 SLC20A2Q08357 652 aa11.69□□□□□ -0.54
VPS52-217ENST00000478934 NFIL3Q16649 462 aa11.69□□□□□ -0.54
VPS52-217ENST00000478934 WHAMMQ8TF30 809 aa11.69□□□□□ -0.54
VPS52-217ENST00000478934 LMBR1Q8WVP7 490 aa11.69□□□□□ -0.54
VPS52-217ENST00000478934 ATP6V1G3Q96LB4 118 aa11.69□□□□□ -0.54
VPS52-217ENST00000478934 KREMEN1Q96MU8 473 aa11.69□□□□□ -0.54
VPS52-217ENST00000478934 TMEM117Q9H0C3 514 aa11.69□□□□□ -0.54
VPS52-217ENST00000478934 CTTNBP2NLQ9P2B4 639 aa11.69□□□□□ -0.54
VPS52-217ENST00000478934 ALG6Q9Y672 507 aa11.69□□□□□ -0.54
VPS52-217ENST00000478934 NFS1Q9Y697 457 aa11.69□□□□□ -0.54
VPS52-217ENST00000478934 CCDC169A6NNP5 214 aa11.68□□□□□ -0.54
VPS52-217ENST00000478934 E7EVH7 732 aa11.68□□□□□ -0.54
VPS52-217ENST00000478934 PLS3P13797 630 aa11.68□□□□□ -0.54
VPS52-217ENST00000478934 CHRNB2P17787 502 aa11.68□□□□□ -0.54
VPS52-217ENST00000478934 QARSP47897 775 aaKnown RBP11.68□□□□□ -0.54
VPS52-217ENST00000478934 SKOR1P84550 965 aa11.68□□□□□ -0.54
VPS52-217ENST00000478934 POU5F1Q01860 360 aaKnown RBP11.68□□□□□ -0.54
VPS52-217ENST00000478934 PPP2R5AQ15172 486 aa11.68□□□□□ -0.54
VPS52-217ENST00000478934 NOP9Q86U38 636 aaKnown RBP11.68□□□□□ -0.54
VPS52-217ENST00000478934 MREGQ8N565 214 aa11.68□□□□□ -0.54
VPS52-217ENST00000478934 UHMK1Q8TAS1 419 aaKnown RBP11.68□□□□□ -0.54
VPS52-217ENST00000478934 PPM1EQ8WY54 764 aa11.68□□□□□ -0.54
VPS52-217ENST00000478934 BSNDQ8WZ55 320 aa11.68□□□□□ -0.54
VPS52-217ENST00000478934 EHMT1Q9H9B1 1298 aa11.68□□□□□ -0.54
VPS52-217ENST00000478934 LARSQ9P2J5 1176 aaKnown RBP11.68□□□□□ -0.54
VPS52-217ENST00000478934 UBIAD1Q9Y5Z9 338 aa11.68□□□□□ -0.54
VPS52-217ENST00000478934 SMIM23A6NLE4 172 aa11.68□□□□□ -0.54
VPS52-217ENST00000478934 MYO1FO00160 1098 aa11.68□□□□□ -0.54
VPS52-217ENST00000478934 CES2O00748 559 aa11.68□□□□□ -0.54
VPS52-217ENST00000478934 ASNSP08243 561 aa11.68□□□□□ -0.54
VPS52-217ENST00000478934 MMEP08473 750 aa11.68□□□□□ -0.54
VPS52-217ENST00000478934 ZNF844Q08AG5 666 aa11.68□□□□□ -0.54
VPS52-217ENST00000478934 MTMR2Q13614 643 aa11.68□□□□□ -0.54
VPS52-217ENST00000478934 MESDQ14696 234 aa11.68□□□□□ -0.54
VPS52-217ENST00000478934 KIF22Q14807 665 aa11.68□□□□□ -0.54
VPS52-217ENST00000478934 ODF2Q5BJF6 829 aa11.68□□□□□ -0.54
VPS52-217ENST00000478934 XKR9Q5GH70 373 aa11.68□□□□□ -0.54
VPS52-217ENST00000478934 STXBP4Q6ZWJ1 553 aa11.68□□□□□ -0.54
VPS52-217ENST00000478934 PPM1KQ8N3J5 372 aa11.68□□□□□ -0.54
VPS52-217ENST00000478934 PRPF38AQ8NAV1 312 aaKnown RBP11.68□□□□□ -0.54
VPS52-217ENST00000478934 ATP8B4Q8TF62 1192 aa11.68□□□□□ -0.54
VPS52-217ENST00000478934 C18orf8Q96DM3 657 aa11.68□□□□□ -0.54
VPS52-217ENST00000478934 PI4K2AQ9BTU6 479 aa11.68□□□□□ -0.54
VPS52-217ENST00000478934 SYNPO2Q9UMS6 1093 aa11.68□□□□□ -0.54
VPS52-217ENST00000478934 NCANO14594 1321 aa11.68□□□□□ -0.54
VPS52-217ENST00000478934 RPTORQ8N122 1335 aa11.68□□□□□ -0.54
VPS52-217ENST00000478934 ERLIN2O94905 339 aa11.67□□□□□ -0.54
VPS52-217ENST00000478934 PGM5Q15124 567 aa11.67□□□□□ -0.54
VPS52-217ENST00000478934 C2CD6Q53TS8 623 aa11.67□□□□□ -0.54
VPS52-217ENST00000478934 KDM7AQ6ZMT4 941 aa11.67□□□□□ -0.54
VPS52-217ENST00000478934 SLC9A9Q8IVB4 645 aa11.67□□□□□ -0.54
VPS52-217ENST00000478934 EFCAB13Q8IY85 973 aa11.67□□□□□ -0.54
VPS52-217ENST00000478934 SYCE1Q8N0S2 351 aa11.67□□□□□ -0.54
VPS52-217ENST00000478934 PLCD3Q8N3E9 789 aa11.67□□□□□ -0.54
VPS52-217ENST00000478934 XXYLT1Q8NBI6 393 aa11.67□□□□□ -0.54
VPS52-217ENST00000478934 ACCSQ96QU6 501 aa11.67□□□□□ -0.54
VPS52-217ENST00000478934 RMDN3Q96TC7 470 aa11.67□□□□□ -0.54
VPS52-217ENST00000478934 CNOT8Q9UFF9 292 aaKnown RBP11.67□□□□□ -0.54
VPS52-217ENST00000478934 INTUQ9ULD6 942 aa11.67□□□□□ -0.54
VPS52-217ENST00000478934 ATP8A1Q9Y2Q0 1164 aa11.67□□□□□ -0.54
VPS52-217ENST00000478934 COL2A1P02458 1487 aaPredicted RBP11.67□□□□□ -0.54
VPS52-217ENST00000478934 ANKRD62A6NC57 917 aa11.67□□□□□ -0.54
VPS52-217ENST00000478934 BHMG1C9JSJ3 638 aaPredicted RBP11.67□□□□□ -0.54
VPS52-217ENST00000478934 DHX9Q08211 1270 aaKnown RBP11.67□□□□□ -0.54
VPS52-217ENST00000478934 LMBRD2Q68DH5 695 aaPredicted RBP11.67□□□□□ -0.54
VPS52-217ENST00000478934 LLGL2Q6P1M3 1020 aa11.67□□□□□ -0.54
VPS52-217ENST00000478934 ANO5Q75V66 913 aa11.67□□□□□ -0.54
VPS52-217ENST00000478934 TMBIM4Q9HC24 238 aa11.67□□□□□ -0.54
VPS52-217ENST00000478934 KCND2Q9NZV8 630 aa11.67□□□□□ -0.54
VPS52-217ENST00000478934 NOVA2Q9UNW9 492 aaKnown RBP11.67□□□□□ -0.54
VPS52-217ENST00000478934 SNX24Q9Y343 169 aa11.67□□□□□ -0.54
VPS52-217ENST00000478934 GOLGA6L10A6NI86 522 aa11.66□□□□□ -0.54
VPS52-217ENST00000478934 TBC1D12O60347 775 aa11.66□□□□□ -0.54
VPS52-217ENST00000478934 PEX10O60683 326 aa11.66□□□□□ -0.54
VPS52-217ENST00000478934 MYZAPP0CAP1 466 aa11.66□□□□□ -0.54
VPS52-217ENST00000478934 SSTR3P32745 418 aaPredicted RBP11.66□□□□□ -0.54
VPS52-217ENST00000478934 MDH1P40925 334 aaKnown RBP11.66□□□□□ -0.54
VPS52-217ENST00000478934 TRAF1Q13077 416 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms