RNA–Protein interactions for RNA: ENST00000478582.5

CCM2-211, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 937 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-211ENST00000478582 AGPAT5Q9NUQ2 364 aa29.55■■■□□ 2.32
CCM2-211ENST00000478582 CHD7Q9P2D1 2997 aa29.55■■■□□ 2.32
CCM2-211ENST00000478582 ADGRA3Q8IWK6 1321 aa29.54■■■□□ 2.32
CCM2-211ENST00000478582 DENND3A2RUS2 1198 aa29.54■■■□□ 2.32
CCM2-211ENST00000478582 LINC01553A4QN01 128 aa29.54■■■□□ 2.32
CCM2-211ENST00000478582 GOLGA6L4A6NEF3 574 aa29.54■■■□□ 2.32
CCM2-211ENST00000478582 UPP2O95045 317 aa29.54■■■□□ 2.32
CCM2-211ENST00000478582 SLFN14P0C7P3 912 aa29.54■■■□□ 2.32
CCM2-211ENST00000478582 AXLP30530 894 aa29.54■■■□□ 2.32
CCM2-211ENST00000478582 NDUFA8P51970 172 aa29.54■■■□□ 2.32
CCM2-211ENST00000478582 CNNM4Q6P4Q7 775 aa29.54■■■□□ 2.32
CCM2-211ENST00000478582 CLEC17AQ6ZS10 378 aa29.54■■■□□ 2.32
CCM2-211ENST00000478582 SPRED2Q7Z698 418 aa29.54■■■□□ 2.32
CCM2-211ENST00000478582 SP7Q8TDD2 431 aaPredicted RBP29.54■■■□□ 2.32
CCM2-211ENST00000478582 KCNN1Q92952 543 aa29.54■■■□□ 2.32
CCM2-211ENST00000478582 PRIMPOLQ96LW4 560 aa29.54■■■□□ 2.32
CCM2-211ENST00000478582 TRAIPQ9BWF2 469 aa29.54■■■□□ 2.32
CCM2-211ENST00000478582 CCDC113Q9H0I3 377 aa29.54■■■□□ 2.32
CCM2-211ENST00000478582 PARVGQ9HBI0 331 aa29.54■■■□□ 2.32
CCM2-211ENST00000478582 KMT5AQ9NQR1 393 aa29.54■■■□□ 2.32
CCM2-211ENST00000478582 PRMT7Q9NVM4 692 aaPredicted RBP29.54■■■□□ 2.32
CCM2-211ENST00000478582 ARHGAP28Q9P2N2 729 aa29.54■■■□□ 2.32
CCM2-211ENST00000478582 EPOPA6NHQ4 379 aa29.53■■■□□ 2.32
CCM2-211ENST00000478582 CCDC169A6NNP5 214 aa29.53■■■□□ 2.32
CCM2-211ENST00000478582 C9IYK1 514 aa29.53■■■□□ 2.32
CCM2-211ENST00000478582 ERLIN2O94905 339 aa29.53■■■□□ 2.32
CCM2-211ENST00000478582 FAM13AO94988 1023 aa29.53■■■□□ 2.32
CCM2-211ENST00000478582 POU3F3P20264 500 aaPredicted RBP29.53■■■□□ 2.32
CCM2-211ENST00000478582 HOXA11P31270 313 aaPredicted RBP29.53■■■□□ 2.32
CCM2-211ENST00000478582 SYKP43405 635 aa29.53■■■□□ 2.32
CCM2-211ENST00000478582 SMTNP53814 917 aa29.53■■■□□ 2.32
CCM2-211ENST00000478582 ERVK-21P61565 698 aa29.53■■■□□ 2.32
CCM2-211ENST00000478582 FAM189BP81408 668 aa29.53■■■□□ 2.32
CCM2-211ENST00000478582 SLC24A5Q71RS6 500 aa29.53■■■□□ 2.32
CCM2-211ENST00000478582 DYMQ7RTS9 669 aa29.53■■■□□ 2.32
CCM2-211ENST00000478582 CRIPAKQ8N1N5 446 aa29.53■■■□□ 2.32
CCM2-211ENST00000478582 TGS1Q96RS0 853 aaKnown RBP29.53■■■□□ 2.32
CCM2-211ENST00000478582 GOLPH3LQ9H4A5 285 aa29.53■■■□□ 2.32
CCM2-211ENST00000478582 TMEM134Q9H6X4 195 aa29.53■■■□□ 2.32
CCM2-211ENST00000478582 DACT1Q9NYF0 836 aa29.53■■■□□ 2.32
CCM2-211ENST00000478582 PHLPP2Q6ZVD8 1323 aa29.52■■■□□ 2.32
CCM2-211ENST00000478582 ACTN4O43707 911 aaKnown RBP29.52■■■□□ 2.32
CCM2-211ENST00000478582 TSPAN1O60635 241 aa29.52■■■□□ 2.32
CCM2-211ENST00000478582 TBCAO75347 108 aaKnown RBP29.52■■■□□ 2.32
CCM2-211ENST00000478582 NCBP1Q09161 790 aaKnown RBP29.52■■■□□ 2.32
CCM2-211ENST00000478582 CEP57L1Q8IYX8 460 aa29.52■■■□□ 2.32
CCM2-211ENST00000478582 YME1L1Q96TA2 773 aa29.52■■■□□ 2.32
CCM2-211ENST00000478582 KIFC3Q9BVG8 833 aa29.52■■■□□ 2.32
CCM2-211ENST00000478582 SERTAD1Q9UHV2 236 aa29.52■■■□□ 2.32
CCM2-211ENST00000478582 PIN4Q9Y237 131 aaKnown RBP29.52■■■□□ 2.32
CCM2-211ENST00000478582 SCP2P22307 547 aa29.51■■■□□ 2.31
CCM2-211ENST00000478582 SARSP49591 514 aaKnown RBP29.51■■■□□ 2.31
CCM2-211ENST00000478582 MAPK6Q16659 721 aa29.51■■■□□ 2.31
CCM2-211ENST00000478582 LONRF3Q496Y0 759 aa29.51■■■□□ 2.31
CCM2-211ENST00000478582 MYCT1Q8N699 235 aa29.51■■■□□ 2.31
CCM2-211ENST00000478582 PPM1EQ8WY54 764 aa29.51■■■□□ 2.31
CCM2-211ENST00000478582 STAMQ92783 540 aa29.51■■■□□ 2.31
CCM2-211ENST00000478582 C7orf25Q9BPX7 421 aa29.51■■■□□ 2.31
CCM2-211ENST00000478582 TRIM9Q9C026 710 aa29.51■■■□□ 2.31
CCM2-211ENST00000478582 RNF216Q9NWF9 866 aaPredicted RBP29.51■■■□□ 2.31
CCM2-211ENST00000478582 FRMD3A2A2Y4 597 aa29.5■■■□□ 2.31
CCM2-211ENST00000478582 H0YCG3 227 aa29.5■■■□□ 2.31
CCM2-211ENST00000478582 K7ERI5 159 aa29.5■■■□□ 2.31
CCM2-211ENST00000478582 NCKAP1LP55160 1127 aa29.5■■■□□ 2.31
CCM2-211ENST00000478582 TMEM161BQ8NDZ6 487 aa29.5■■■□□ 2.31
CCM2-211ENST00000478582 CCDC51Q96ER9 411 aa29.5■■■□□ 2.31
CCM2-211ENST00000478582 ELAC1Q9H777 363 aaKnown RBP29.5■■■□□ 2.31
CCM2-211ENST00000478582 SEL1LQ9UBV2 794 aa29.5■■■□□ 2.31
CCM2-211ENST00000478582 TTC3P53804 2025 aa29.49■■■□□ 2.31
CCM2-211ENST00000478582 EYSQ5T1H1 3165 aa29.49■■■□□ 2.31
CCM2-211ENST00000478582 A0A0U1RQF3 1178 aa29.49■■■□□ 2.31
CCM2-211ENST00000478582 ACKR2O00590 384 aa29.49■■■□□ 2.31
CCM2-211ENST00000478582 SLC16A4O15374 487 aa29.49■■■□□ 2.31
CCM2-211ENST00000478582 GTPBP6O43824 516 aaPredicted RBP29.49■■■□□ 2.31
CCM2-211ENST00000478582 TRAK2O60296 914 aa29.49■■■□□ 2.31
CCM2-211ENST00000478582 PRKCBP05771 671 aa29.49■■■□□ 2.31
CCM2-211ENST00000478582 GAP43P17677 238 aa29.49■■■□□ 2.31
CCM2-211ENST00000478582 NPAS4Q8IUM7 802 aa29.49■■■□□ 2.31
CCM2-211ENST00000478582 FIZ1Q96SL8 496 aa29.49■■■□□ 2.31
CCM2-211ENST00000478582 MTCH2Q9Y6C9 303 aa29.49■■■□□ 2.31
CCM2-211ENST00000478582 CNTNAP2Q9UHC6 1331 aa29.48■■■□□ 2.31
CCM2-211ENST00000478582 ZNF202O95125 648 aa29.48■■■□□ 2.31
CCM2-211ENST00000478582 STAG3L1P0CL83 205 aa29.48■■■□□ 2.31
CCM2-211ENST00000478582 MAPTP10636 758 aaKnown RBP29.48■■■□□ 2.31
CCM2-211ENST00000478582 ARF4P18085 180 aaPredicted RBP29.48■■■□□ 2.31
CCM2-211ENST00000478582 CCDC85BQ15834 202 aaPredicted RBP29.48■■■□□ 2.31
CCM2-211ENST00000478582 TPRNQ4KMQ1 711 aa29.48■■■□□ 2.31
CCM2-211ENST00000478582 NOTUMQ6P988 496 aa29.48■■■□□ 2.31
CCM2-211ENST00000478582 ZHX3Q9H4I2 956 aa29.48■■■□□ 2.31
CCM2-211ENST00000478582 A0A1B0GUA9 196 aa29.47■■■□□ 2.31
CCM2-211ENST00000478582 B4GALT5O43286 388 aa29.47■■■□□ 2.31
CCM2-211ENST00000478582 LPXNO60711 386 aa29.47■■■□□ 2.31
CCM2-211ENST00000478582 SKIP12755 728 aa29.47■■■□□ 2.31
CCM2-211ENST00000478582 TWF2Q6IBS0 349 aaKnown RBP29.47■■■□□ 2.31
CCM2-211ENST00000478582 TAS1R3Q7RTX0 852 aa29.47■■■□□ 2.31
CCM2-211ENST00000478582 HAUS6Q7Z4H7 955 aa29.47■■■□□ 2.31
CCM2-211ENST00000478582 FMR1NBQ8N0W7 255 aaPredicted RBP29.47■■■□□ 2.31
CCM2-211ENST00000478582 ENGASEQ8NFI3 743 aa29.47■■■□□ 2.31
CCM2-211ENST00000478582 PAGE5Q96GU1 130 aa29.47■■■□□ 2.31
CCM2-211ENST00000478582 SAMD11Q96NU1 681 aa29.47■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms