RNA–Protein interactions for RNA: ENST00000478232.1

RCC1-211, Transcript of regulator of chromosome condensation 1, humanhuman

TSL 2

Gene RCC1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCC1-211ENST00000478232 ALDH2P05091 517 aa15.31■□□□□ 0.04
RCC1-211ENST00000478232 GALTP07902 379 aa15.31■□□□□ 0.04
RCC1-211ENST00000478232 TECP42680 631 aa15.31■□□□□ 0.04
RCC1-211ENST00000478232 ZNF174Q15697 407 aa15.31■□□□□ 0.04
RCC1-211ENST00000478232 UBXN11Q5T124 520 aa15.31■□□□□ 0.04
RCC1-211ENST00000478232 AGMOQ6ZNB7 445 aa15.31■□□□□ 0.04
RCC1-211ENST00000478232 CATSPER3Q86XQ3 398 aa15.31■□□□□ 0.04
RCC1-211ENST00000478232 VN1R2Q8NFZ6 395 aa15.31■□□□□ 0.04
RCC1-211ENST00000478232 ERMNQ8TAM6 284 aa15.31■□□□□ 0.04
RCC1-211ENST00000478232 URGCPQ8TCY9 931 aa15.31■□□□□ 0.04
RCC1-211ENST00000478232 CCDC51Q96ER9 411 aa15.31■□□□□ 0.04
RCC1-211ENST00000478232 POLR3CQ9BUI4 534 aaPredicted RBP15.31■□□□□ 0.04
RCC1-211ENST00000478232 NFKBIZQ9BYH8 718 aa15.31■□□□□ 0.04
RCC1-211ENST00000478232 DBR1Q9UK59 544 aaKnown RBP15.31■□□□□ 0.04
RCC1-211ENST00000478232 INPP5FQ9Y2H2 1132 aa15.31■□□□□ 0.04
RCC1-211ENST00000478232 CNTNAP2Q9UHC6 1331 aa15.31■□□□□ 0.04
RCC1-211ENST00000478232 A0A087WWV3 80 aa15.3■□□□□ 0.04
RCC1-211ENST00000478232 POTEMA6NI47 508 aa15.3■□□□□ 0.04
RCC1-211ENST00000478232 MEIS3P2A8K0S8 358 aa15.3■□□□□ 0.04
RCC1-211ENST00000478232 INO80B-WBP1J3KQ70 363 aa15.3■□□□□ 0.04
RCC1-211ENST00000478232 OR52Z1P0C646 297 aa15.3■□□□□ 0.04
RCC1-211ENST00000478232 HOXB8P17481 243 aaPredicted RBP15.3■□□□□ 0.04
RCC1-211ENST00000478232 NCLP19338 710 aaKnown RBP15.3■□□□□ 0.04
RCC1-211ENST00000478232 TRAPPC10P48553 1259 aa15.3■□□□□ 0.04
RCC1-211ENST00000478232 GNL2Q13823 731 aaKnown RBP15.3■□□□□ 0.04
RCC1-211ENST00000478232 GIT2Q14161 759 aa15.3■□□□□ 0.04
RCC1-211ENST00000478232 NOTUMQ6P988 496 aa15.3■□□□□ 0.04
RCC1-211ENST00000478232 DDX53Q86TM3 631 aaKnown RBP15.3■□□□□ 0.04
RCC1-211ENST00000478232 NOSTRINQ8IVI9 506 aa15.3■□□□□ 0.04
RCC1-211ENST00000478232 VPS52Q8N1B4 723 aa15.3■□□□□ 0.04
RCC1-211ENST00000478232 IGSF21Q96ID5 467 aa15.3■□□□□ 0.04
RCC1-211ENST00000478232 RSAD1Q9HA92 442 aa15.3■□□□□ 0.04
RCC1-211ENST00000478232 PLXNA4Q9HCM2 1894 aa15.3■□□□□ 0.04
RCC1-211ENST00000478232 C11orf16Q9NQ32 467 aa15.3■□□□□ 0.04
RCC1-211ENST00000478232 STK39Q9UEW8 545 aa15.3■□□□□ 0.04
RCC1-211ENST00000478232 NOL7Q9UMY1 257 aaKnown RBP15.3■□□□□ 0.04
RCC1-211ENST00000478232 USP15Q9Y4E8 981 aaPredicted RBP15.3■□□□□ 0.04
RCC1-211ENST00000478232 ATG2AQ2TAZ0 1938 aa15.29■□□□□ 0.04
RCC1-211ENST00000478232 C2orf71A6NGG8 1288 aa15.29■□□□□ 0.04
RCC1-211ENST00000478232 TSPAN1O60635 241 aa15.29■□□□□ 0.04
RCC1-211ENST00000478232 ITGA4P13612 1032 aa15.29■□□□□ 0.04
RCC1-211ENST00000478232 GLRA2P23416 452 aa15.29■□□□□ 0.04
RCC1-211ENST00000478232 RPA1P27694 616 aa15.29■□□□□ 0.04
RCC1-211ENST00000478232 RBM10P98175 930 aaKnown RBP15.29■□□□□ 0.04
RCC1-211ENST00000478232 CAPSQ13938 189 aa15.29■□□□□ 0.04
RCC1-211ENST00000478232 TTC38Q5R3I4 469 aa15.29■□□□□ 0.04
RCC1-211ENST00000478232 ANKRD54Q6NXT1 300 aa15.29■□□□□ 0.04
RCC1-211ENST00000478232 ZNF280BQ86YH2 543 aa15.29■□□□□ 0.04
RCC1-211ENST00000478232 RNF135Q8IUD6 432 aa15.29■□□□□ 0.04
RCC1-211ENST00000478232 TMEM87AQ8NBN3 555 aa15.29■□□□□ 0.04
RCC1-211ENST00000478232 MCPH1Q8NEM0 835 aa15.29■□□□□ 0.04
RCC1-211ENST00000478232 ASAP3Q8TDY4 903 aa15.29■□□□□ 0.04
RCC1-211ENST00000478232 CASP10Q92851 521 aa15.29■□□□□ 0.04
RCC1-211ENST00000478232 FAM193BQ96PV7 902 aaPredicted RBP15.29■□□□□ 0.04
RCC1-211ENST00000478232 TMEM175Q9BSA9 504 aa15.29■□□□□ 0.04
RCC1-211ENST00000478232 PHF7Q9BWX1 381 aaPredicted RBP15.29■□□□□ 0.04
RCC1-211ENST00000478232 CSRNP2Q9H175 543 aa15.29■□□□□ 0.04
RCC1-211ENST00000478232 S1PR5Q9H228 398 aa15.29■□□□□ 0.04
RCC1-211ENST00000478232 IRAK3Q9Y616 596 aa15.29■□□□□ 0.04
RCC1-211ENST00000478232 PRR33A8MZF0 331 aa15.28■□□□□ 0.04
RCC1-211ENST00000478232 LOC730098B7Z3J9 87 aa15.28■□□□□ 0.04
RCC1-211ENST00000478232 MED24O75448 989 aa15.28■□□□□ 0.04
RCC1-211ENST00000478232 MUTP22033 750 aa15.28■□□□□ 0.04
RCC1-211ENST00000478232 U2AF2P26368 475 aaKnown RBP eCLIP15.28■□□□□ 0.04
RCC1-211ENST00000478232 SLC11A1P49279 550 aa15.28■□□□□ 0.04
RCC1-211ENST00000478232 MBTD1Q05BQ5 628 aa15.28■□□□□ 0.04
RCC1-211ENST00000478232 PDIA5Q14554 519 aa15.28■□□□□ 0.04
RCC1-211ENST00000478232 RABEP1Q15276 862 aa15.28■□□□□ 0.04
RCC1-211ENST00000478232 HACE1Q8IYU2 909 aa15.28■□□□□ 0.04
RCC1-211ENST00000478232 SMG8Q8ND04 991 aaKnown RBP15.28■□□□□ 0.04
RCC1-211ENST00000478232 SUSD6Q92537 303 aa15.28■□□□□ 0.04
RCC1-211ENST00000478232 GBP3Q9H0R5 595 aa15.28■□□□□ 0.04
RCC1-211ENST00000478232 POLR3FQ9H1D9 316 aaPredicted RBP15.28■□□□□ 0.04
RCC1-211ENST00000478232 DNAJB4Q9UDY4 337 aa15.28■□□□□ 0.04
RCC1-211ENST00000478232 FAN1Q9Y2M0 1017 aa15.28■□□□□ 0.04
RCC1-211ENST00000478232 KIF3AQ9Y496 699 aa15.28■□□□□ 0.04
RCC1-211ENST00000478232 ARIH1Q9Y4X5 557 aaPredicted RBP15.28■□□□□ 0.04
RCC1-211ENST00000478232 IPPQ9Y573 584 aa15.28■□□□□ 0.04
RCC1-211ENST00000478232 A0A1B0GUA9 196 aa15.27■□□□□ 0.04
RCC1-211ENST00000478232 FAM86C2PA6NEL3 165 aa15.27■□□□□ 0.04
RCC1-211ENST00000478232 ST18O60284 1047 aa15.27■□□□□ 0.04
RCC1-211ENST00000478232 USO1O60763 962 aaKnown RBP15.27■□□□□ 0.04
RCC1-211ENST00000478232 CLASP2O75122 1294 aaKnown RBP15.27■□□□□ 0.04
RCC1-211ENST00000478232 DDHD2O94830 711 aa15.27■□□□□ 0.04
RCC1-211ENST00000478232 CTSAP10619 480 aa15.27■□□□□ 0.04
RCC1-211ENST00000478232 ARF4P18085 180 aaPredicted RBP15.27■□□□□ 0.04
RCC1-211ENST00000478232 FXR2P51116 673 aaKnown RBP eCLIP15.27■□□□□ 0.04
RCC1-211ENST00000478232 AFF1P51825 1210 aaKnown RBP15.27■□□□□ 0.04
RCC1-211ENST00000478232 CBX2Q14781 532 aaPredicted RBP15.27■□□□□ 0.04
RCC1-211ENST00000478232 AMHR2Q16671 573 aa15.27■□□□□ 0.04
RCC1-211ENST00000478232 TPRNQ4KMQ1 711 aa15.27■□□□□ 0.04
RCC1-211ENST00000478232 HERC4Q5GLZ8 1057 aaPredicted RBP15.27■□□□□ 0.04
RCC1-211ENST00000478232 LLGL2Q6P1M3 1020 aa15.27■□□□□ 0.04
RCC1-211ENST00000478232 SYCE2Q6PIF2 218 aa15.27■□□□□ 0.04
RCC1-211ENST00000478232 TMEM173Q86WV6 379 aaPredicted RBP15.27■□□□□ 0.04
RCC1-211ENST00000478232 C4orf32Q8N8J7 132 aa15.27■□□□□ 0.04
RCC1-211ENST00000478232 CPB2Q96IY4 423 aa15.27■□□□□ 0.04
RCC1-211ENST00000478232 EIF2AQ9BY44 585 aaKnown RBP15.27■□□□□ 0.04
RCC1-211ENST00000478232 ZBP1Q9H171 429 aa15.27■□□□□ 0.04
RCC1-211ENST00000478232 RAPGEFL1Q9UHV5 662 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms