RNA–Protein interactions for RNA: ENST00000477739.1

CMC1-209, Transcript of C-X9-C motif containing 1, humanhuman

TSL 1 (best)

Gene CMC1, Length 3,749 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-209ENST00000477739 PARVGQ9HBI0 331 aa10.51□□□□□ -0.73
CMC1-209ENST00000477739 ALG6Q9Y672 507 aa10.51□□□□□ -0.73
CMC1-209ENST00000477739 ZC3H4Q9UPT8 1303 aaKnown RBP10.51□□□□□ -0.73
CMC1-209ENST00000477739 HMGB1P1B2RPK0 211 aaPredicted RBP10.51□□□□□ -0.73
CMC1-209ENST00000477739 C21orf2O43822 256 aa10.51□□□□□ -0.73
CMC1-209ENST00000477739 STX2P32856 288 aa10.51□□□□□ -0.73
CMC1-209ENST00000477739 PMS2P54278 862 aa10.51□□□□□ -0.73
CMC1-209ENST00000477739 STRIP1Q5VSL9 837 aa10.51□□□□□ -0.73
CMC1-209ENST00000477739 CCDC197Q8NCU1 140 aa10.51□□□□□ -0.73
CMC1-209ENST00000477739 PPP1R12CQ9BZL4 782 aa10.51□□□□□ -0.73
CMC1-209ENST00000477739 DNAJC18Q9H819 358 aa10.51□□□□□ -0.73
CMC1-209ENST00000477739 VPS37BQ9H9H4 285 aa10.51□□□□□ -0.73
CMC1-209ENST00000477739 NYAP2Q9P242 653 aa10.51□□□□□ -0.73
CMC1-209ENST00000477739 ANKFY1Q9P2R3 1169 aa10.51□□□□□ -0.73
CMC1-209ENST00000477739 RASAL2Q9UJF2 1139 aa10.51□□□□□ -0.73
CMC1-209ENST00000477739 IGKV6D-41A0A0C4DH26 115 aa10.51□□□□□ -0.73
CMC1-209ENST00000477739 SSU72P8A0A1W2PR75 194 aa10.51□□□□□ -0.73
CMC1-209ENST00000477739 RASGRF2O14827 1237 aa10.51□□□□□ -0.73
CMC1-209ENST00000477739 FOSP01100 380 aaPredicted RBP10.51□□□□□ -0.73
CMC1-209ENST00000477739 TNNI1P19237 187 aa10.51□□□□□ -0.73
CMC1-209ENST00000477739 CD58P19256 250 aa10.51□□□□□ -0.73
CMC1-209ENST00000477739 COMTP21964 271 aa10.51□□□□□ -0.73
CMC1-209ENST00000477739 RNASELQ05823 741 aaKnown RBP10.51□□□□□ -0.73
CMC1-209ENST00000477739 PPATQ06203 517 aa10.51□□□□□ -0.73
CMC1-209ENST00000477739 AP3B2Q13367 1082 aa10.51□□□□□ -0.73
CMC1-209ENST00000477739 XKR9Q5GH70 373 aa10.51□□□□□ -0.73
CMC1-209ENST00000477739 FIGNQ5HY92 759 aa10.51□□□□□ -0.73
CMC1-209ENST00000477739 C10orf76Q5T2E6 689 aa10.51□□□□□ -0.73
CMC1-209ENST00000477739 CC2D2BQ6DHV5 1058 aa10.51□□□□□ -0.73
CMC1-209ENST00000477739 EEPD1Q7L9B9 569 aa10.51□□□□□ -0.73
CMC1-209ENST00000477739 VSIG1Q86XK7 387 aa10.51□□□□□ -0.73
CMC1-209ENST00000477739 CDAN1Q8IWY9 1227 aa10.51□□□□□ -0.73
CMC1-209ENST00000477739 RNF10Q8N5U6 811 aaKnown RBP10.51□□□□□ -0.73
CMC1-209ENST00000477739 INTS2Q9H0H0 1204 aaKnown RBP10.51□□□□□ -0.73
CMC1-209ENST00000477739 FAM198AQ9UFP1 575 aa10.51□□□□□ -0.73
CMC1-209ENST00000477739 A8MUI8 341 aa10.5□□□□□ -0.73
CMC1-209ENST00000477739 SGPL1O95470 568 aa10.5□□□□□ -0.73
CMC1-209ENST00000477739 ARP10275 920 aa10.5□□□□□ -0.73
CMC1-209ENST00000477739 STAT2P52630 851 aa10.5□□□□□ -0.73
CMC1-209ENST00000477739 SGO2Q562F6 1265 aa10.5□□□□□ -0.73
CMC1-209ENST00000477739 JAMLQ86YT9 394 aa10.5□□□□□ -0.73
CMC1-209ENST00000477739 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.5□□□□□ -0.73
CMC1-209ENST00000477739 PRMT6Q96LA8 375 aaPredicted RBP10.5□□□□□ -0.73
CMC1-209ENST00000477739 P2RX7Q99572 595 aaKnown RBP10.5□□□□□ -0.73
CMC1-209ENST00000477739 NUCKS1Q9H1E3 243 aaKnown RBP10.5□□□□□ -0.73
CMC1-209ENST00000477739 NRAPQ86VF7 1730 aa10.5□□□□□ -0.73
CMC1-209ENST00000477739 KAT6AQ92794 2004 aa10.5□□□□□ -0.73
CMC1-209ENST00000477739 DNM1LO00429 736 aa10.5□□□□□ -0.73
CMC1-209ENST00000477739 LGR5O75473 907 aa10.5□□□□□ -0.73
CMC1-209ENST00000477739 PPP2R5AQ15172 486 aa10.5□□□□□ -0.73
CMC1-209ENST00000477739 DLGAP5Q15398 846 aa10.5□□□□□ -0.73
CMC1-209ENST00000477739 MIER3Q7Z3K6 550 aa10.5□□□□□ -0.73
CMC1-209ENST00000477739 IQCKQ8N0W5 287 aa10.5□□□□□ -0.73
CMC1-209ENST00000477739 C4orf33Q8N1A6 199 aa10.5□□□□□ -0.73
CMC1-209ENST00000477739 CCDC33Q8N5R6 958 aa10.5□□□□□ -0.73
CMC1-209ENST00000477739 UBL4BQ8N7F7 174 aa10.5□□□□□ -0.73
CMC1-209ENST00000477739 LNX1Q8TBB1 728 aaPredicted RBP10.5□□□□□ -0.73
CMC1-209ENST00000477739 LXNQ9BS40 222 aa10.5□□□□□ -0.73
CMC1-209ENST00000477739 ANAPC7Q9UJX3 599 aa10.5□□□□□ -0.73
CMC1-209ENST00000477739 HIP1RO75146 1068 aa10.5□□□□□ -0.73
CMC1-209ENST00000477739 HMGB2P26583 209 aaKnown RBP10.5□□□□□ -0.73
CMC1-209ENST00000477739 ZNF131P52739 623 aa10.5□□□□□ -0.73
CMC1-209ENST00000477739 SLC47A2Q86VL8 602 aa10.5□□□□□ -0.73
CMC1-209ENST00000477739 CDR2LQ86X02 465 aaPredicted RBP10.5□□□□□ -0.73
CMC1-209ENST00000477739 LARGE2Q8N3Y3 721 aa10.5□□□□□ -0.73
CMC1-209ENST00000477739 SLC35C1Q96A29 364 aa10.5□□□□□ -0.73
CMC1-209ENST00000477739 CEP63Q96MT8 703 aa10.5□□□□□ -0.73
CMC1-209ENST00000477739 RAB17Q9H0T7 212 aa10.5□□□□□ -0.73
CMC1-209ENST00000477739 ABCF3Q9NUQ8 709 aa10.5□□□□□ -0.73
CMC1-209ENST00000477739 DCTN4Q9UJW0 460 aa10.5□□□□□ -0.73
CMC1-209ENST00000477739 MEIS2O14770 477 aa10.49□□□□□ -0.73
CMC1-209ENST00000477739 FAM107AO95990 144 aa10.49□□□□□ -0.73
CMC1-209ENST00000477739 PDHA1P08559 390 aa10.49□□□□□ -0.73
CMC1-209ENST00000477739 FMO5P49326 533 aa10.49□□□□□ -0.73
CMC1-209ENST00000477739 IRX4P78413 519 aa10.49□□□□□ -0.73
CMC1-209ENST00000477739 ITGB3BPQ13352 177 aaPredicted RBP10.49□□□□□ -0.73
CMC1-209ENST00000477739 SCARA5Q6ZMJ2 495 aa10.49□□□□□ -0.73
CMC1-209ENST00000477739 IRF2BP2Q7Z5L9 587 aa10.49□□□□□ -0.73
CMC1-209ENST00000477739 LRRN4Q8WUT4 740 aa10.49□□□□□ -0.73
CMC1-209ENST00000477739 KLHL29Q96CT2 875 aa10.49□□□□□ -0.73
CMC1-209ENST00000477739 C11orf70Q9BRQ4 267 aa10.49□□□□□ -0.73
CMC1-209ENST00000477739 NUP85Q9BW27 656 aa10.49□□□□□ -0.73
CMC1-209ENST00000477739 TAOK3Q9H2K8 898 aa10.49□□□□□ -0.73
CMC1-209ENST00000477739 CXorf56Q9H5V9 222 aa10.49□□□□□ -0.73
CMC1-209ENST00000477739 TMBIM4Q9HC24 238 aa10.49□□□□□ -0.73
CMC1-209ENST00000477739 PRR12Q9ULL5 1215 aa10.49□□□□□ -0.73
CMC1-209ENST00000477739 MAGED2Q9UNF1 606 aaPredicted RBP10.49□□□□□ -0.73
CMC1-209ENST00000477739 TNRC6CQ9HCJ0 1690 aaKnown RBP10.49□□□□□ -0.73
CMC1-209ENST00000477739 ANKRD63C9JTQ0 380 aa10.49□□□□□ -0.73
CMC1-209ENST00000477739 GH1P01241 217 aa10.49□□□□□ -0.73
CMC1-209ENST00000477739 CCDC172P0C7W6 258 aa10.49□□□□□ -0.73
CMC1-209ENST00000477739 POLR2MP0CAP2 368 aa10.49□□□□□ -0.73
CMC1-209ENST00000477739 SOX5P35711 763 aa10.49□□□□□ -0.73
CMC1-209ENST00000477739 RINT1Q6NUQ1 792 aa10.49□□□□□ -0.73
CMC1-209ENST00000477739 ZNF365Q70YC5 407 aa10.49□□□□□ -0.73
CMC1-209ENST00000477739 HOOK3Q86VS8 718 aa10.49□□□□□ -0.73
CMC1-209ENST00000477739 ARHGEF19Q8IW93 802 aa10.49□□□□□ -0.73
CMC1-209ENST00000477739 ZNF526Q8TF50 670 aaPredicted RBP10.49□□□□□ -0.73
CMC1-209ENST00000477739 PIK3R5Q8WYR1 880 aa10.49□□□□□ -0.73
CMC1-209ENST00000477739 POMGNT1Q8WZA1 660 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms