RNA–Protein interactions for RNA: ENST00000474289.6

ECHDC1-214, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 2,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-214ENST00000474289 PTDSS1P48651 473 aaKnown RBP20■□□□□ 0.79
ECHDC1-214ENST00000474289 TNNI2P48788 182 aa20■□□□□ 0.79
ECHDC1-214ENST00000474289 NT5C2P49902 561 aa20■□□□□ 0.79
ECHDC1-214ENST00000474289 PDCD2Q16342 344 aaPredicted RBP20■□□□□ 0.79
ECHDC1-214ENST00000474289 PPP1R15BQ5SWA1 713 aa20■□□□□ 0.79
ECHDC1-214ENST00000474289 POTEBQ6S5H4 581 aa20■□□□□ 0.79
ECHDC1-214ENST00000474289 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP20■□□□□ 0.79
ECHDC1-214ENST00000474289 ENDOVQ8N8Q3 282 aaKnown RBP20■□□□□ 0.79
ECHDC1-214ENST00000474289 COA7Q96BR5 231 aa20■□□□□ 0.79
ECHDC1-214ENST00000474289 ERP27Q96DN0 273 aa20■□□□□ 0.79
ECHDC1-214ENST00000474289 MAGEB18Q96M61 343 aa20■□□□□ 0.79
ECHDC1-214ENST00000474289 UBA5Q9GZZ9 404 aa20■□□□□ 0.79
ECHDC1-214ENST00000474289 TAOK3Q9H2K8 898 aa20■□□□□ 0.79
ECHDC1-214ENST00000474289 TAS2R14Q9NYV8 317 aa20■□□□□ 0.79
ECHDC1-214ENST00000474289 SLAIN2Q9P270 581 aa20■□□□□ 0.79
ECHDC1-214ENST00000474289 ALG6Q9Y672 507 aa20■□□□□ 0.79
ECHDC1-214ENST00000474289 ATP5DP30049 168 aa20■□□□□ 0.79
ECHDC1-214ENST00000474289 SOX5P35711 763 aa20■□□□□ 0.79
ECHDC1-214ENST00000474289 CASP4P49662 377 aa20■□□□□ 0.79
ECHDC1-214ENST00000474289 ADCY7P51828 1080 aa20■□□□□ 0.79
ECHDC1-214ENST00000474289 MTHFD1LQ6UB35 978 aa20■□□□□ 0.79
ECHDC1-214ENST00000474289 INTS8Q75QN2 995 aaKnown RBP20■□□□□ 0.79
ECHDC1-214ENST00000474289 AGGF1Q8N302 714 aaeCLIP20■□□□□ 0.79
ECHDC1-214ENST00000474289 SH3RF3Q8TEJ3 882 aaPredicted RBP20■□□□□ 0.79
ECHDC1-214ENST00000474289 ZFAND2BQ8WV99 257 aa20■□□□□ 0.79
ECHDC1-214ENST00000474289 UIMC1Q96RL1 719 aa20■□□□□ 0.79
ECHDC1-214ENST00000474289 SYT11Q9BT88 431 aa20■□□□□ 0.79
ECHDC1-214ENST00000474289 AAASQ9NRG9 546 aa20■□□□□ 0.79
ECHDC1-214ENST00000474289 DDX25Q9UHL0 483 aaKnown RBP20■□□□□ 0.79
ECHDC1-214ENST00000474289 KDM3AQ9Y4C1 1321 aa19.99■□□□□ 0.79
ECHDC1-214ENST00000474289 H0Y3Z8 333 aa19.99■□□□□ 0.79
ECHDC1-214ENST00000474289 KRT18P05783 430 aaKnown RBP19.99■□□□□ 0.79
ECHDC1-214ENST00000474289 RASA1P20936 1047 aa19.99■□□□□ 0.79
ECHDC1-214ENST00000474289 SP100P23497 879 aaPredicted RBP19.99■□□□□ 0.79
ECHDC1-214ENST00000474289 KNOP1Q1ED39 458 aaKnown RBP19.99■□□□□ 0.79
ECHDC1-214ENST00000474289 ARSHQ5FYA8 562 aa19.99■□□□□ 0.79
ECHDC1-214ENST00000474289 VSIG1Q86XK7 387 aa19.99■□□□□ 0.79
ECHDC1-214ENST00000474289 PALB2Q86YC2 1186 aa19.99■□□□□ 0.79
ECHDC1-214ENST00000474289 CCDC105Q8IYK2 499 aa19.99■□□□□ 0.79
ECHDC1-214ENST00000474289 HAO1Q9UJM8 370 aa19.99■□□□□ 0.79
ECHDC1-214ENST00000474289 PCDHA12Q9UN75 941 aa19.99■□□□□ 0.79
ECHDC1-214ENST00000474289 ALDH3A1P30838 453 aa19.98■□□□□ 0.79
ECHDC1-214ENST00000474289 FAM47EQ6ZV65 393 aa19.98■□□□□ 0.79
ECHDC1-214ENST00000474289 SUPT20HQ8NEM7 779 aa19.98■□□□□ 0.79
ECHDC1-214ENST00000474289 DNAJC9Q8WXX5 260 aa19.98■□□□□ 0.79
ECHDC1-214ENST00000474289 WDR35Q9P2L0 1181 aa19.98■□□□□ 0.79
ECHDC1-214ENST00000474289 TCRBV7S2A1N4TA0A589 114 aa19.98■□□□□ 0.79
ECHDC1-214ENST00000474289 MARCH6O60337 910 aa19.98■□□□□ 0.79
ECHDC1-214ENST00000474289 TTLL1O95922 423 aa19.98■□□□□ 0.79
ECHDC1-214ENST00000474289 TAC1P20366 129 aa19.98■□□□□ 0.79
ECHDC1-214ENST00000474289 SEPT14Q6ZU15 432 aa19.98■□□□□ 0.79
ECHDC1-214ENST00000474289 CYFIP1Q7L576 1253 aa19.98■□□□□ 0.79
ECHDC1-214ENST00000474289 GRAMD1AQ96CP6 724 aa19.98■□□□□ 0.79
ECHDC1-214ENST00000474289 PITPNM3Q9BZ71 974 aa19.98■□□□□ 0.79
ECHDC1-214ENST00000474289 DLGAP2Q9P1A6 1054 aa19.98■□□□□ 0.79
ECHDC1-214ENST00000474289 MYH14Q7Z406 1995 aaKnown RBP19.98■□□□□ 0.79
ECHDC1-214ENST00000474289 TP73O15350 636 aa19.97■□□□□ 0.79
ECHDC1-214ENST00000474289 ATP5HO75947 161 aa19.97■□□□□ 0.79
ECHDC1-214ENST00000474289 HIBADHP31937 336 aaKnown RBP19.97■□□□□ 0.79
ECHDC1-214ENST00000474289 RFC5P40937 340 aa19.97■□□□□ 0.79
ECHDC1-214ENST00000474289 KCNJ1P48048 391 aa19.97■□□□□ 0.79
ECHDC1-214ENST00000474289 POLGP54098 1239 aaPredicted RBP19.97■□□□□ 0.79
ECHDC1-214ENST00000474289 ADCY1Q08828 1119 aa19.97■□□□□ 0.79
ECHDC1-214ENST00000474289 CTTNQ14247 550 aaKnown RBP19.97■□□□□ 0.79
ECHDC1-214ENST00000474289 TSNAXIP1Q2TAA8 658 aa19.97■□□□□ 0.79
ECHDC1-214ENST00000474289 GRIPAP1Q4V328 841 aa19.97■□□□□ 0.79
ECHDC1-214ENST00000474289 RNF220Q5VTB9 566 aa19.97■□□□□ 0.79
ECHDC1-214ENST00000474289 KIAA1683Q9H0B3 1180 aa19.97■□□□□ 0.79
ECHDC1-214ENST00000474289 CHKBQ9Y259 395 aa19.97■□□□□ 0.79
ECHDC1-214ENST00000474289 PASKQ96RG2 1323 aa19.97■□□□□ 0.79
ECHDC1-214ENST00000474289 FOXN2P32314 431 aa19.97■□□□□ 0.79
ECHDC1-214ENST00000474289 COILP38432 576 aaPredicted RBP19.97■□□□□ 0.79
ECHDC1-214ENST00000474289 SETDB1Q15047 1291 aa19.97■□□□□ 0.79
ECHDC1-214ENST00000474289 ARHGEF18Q6ZSZ5 1173 aa19.97■□□□□ 0.79
ECHDC1-214ENST00000474289 TXNRD3Q86VQ6 643 aa19.97■□□□□ 0.79
ECHDC1-214ENST00000474289 UBL4BQ8N7F7 174 aa19.97■□□□□ 0.79
ECHDC1-214ENST00000474289 TTC8Q8TAM2 541 aa19.97■□□□□ 0.79
ECHDC1-214ENST00000474289 TBC1D10AQ9BXI6 508 aa19.97■□□□□ 0.79
ECHDC1-214ENST00000474289 ANKRD62A6NC57 917 aa19.96■□□□□ 0.79
ECHDC1-214ENST00000474289 MIF4GDA9UHW6 222 aaKnown RBP19.96■□□□□ 0.79
ECHDC1-214ENST00000474289 CALCOCO2Q13137 446 aa19.96■□□□□ 0.79
ECHDC1-214ENST00000474289 DRAP1Q14919 205 aaPredicted RBP19.96■□□□□ 0.79
ECHDC1-214ENST00000474289 TNIP1Q15025 636 aa19.96■□□□□ 0.79
ECHDC1-214ENST00000474289 CYP4X1Q8N118 509 aa19.96■□□□□ 0.79
ECHDC1-214ENST00000474289 DRAXINQ8NBI3 349 aaPredicted RBP19.96■□□□□ 0.79
ECHDC1-214ENST00000474289 INPP5DQ92835 1189 aa19.96■□□□□ 0.79
ECHDC1-214ENST00000474289 FAM136AQ96C01 138 aa19.96■□□□□ 0.79
ECHDC1-214ENST00000474289 ZSWIM1Q9BR11 485 aa19.96■□□□□ 0.79
ECHDC1-214ENST00000474289 SEPT11Q9NVA2 429 aaKnown RBP19.96■□□□□ 0.79
ECHDC1-214ENST00000474289 IRAK4Q9NWZ3 460 aa19.96■□□□□ 0.79
ECHDC1-214ENST00000474289 DOT1LQ8TEK3 1739 aa19.96■□□□□ 0.79
ECHDC1-214ENST00000474289 GTPBP10A4D1E9 387 aaKnown RBP19.96■□□□□ 0.79
ECHDC1-214ENST00000474289 ENTPD5O75356 428 aa19.96■□□□□ 0.79
ECHDC1-214ENST00000474289 EYA4O95677 639 aa19.96■□□□□ 0.79
ECHDC1-214ENST00000474289 NR3C1P04150 777 aa19.96■□□□□ 0.79
ECHDC1-214ENST00000474289 EPHB2P29323 1055 aa19.96■□□□□ 0.79
ECHDC1-214ENST00000474289 YARSP54577 528 aaKnown RBP19.96■□□□□ 0.79
ECHDC1-214ENST00000474289 SLC12A3P55017 1021 aa19.96■□□□□ 0.79
ECHDC1-214ENST00000474289 SF3B3Q15393 1217 aaKnown RBP19.96■□□□□ 0.79
ECHDC1-214ENST00000474289 UBE2SQ16763 222 aa19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms