RNA–Protein interactions for RNA: ENST00000474067.5

SNX13-206, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 603 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-206ENST00000474067 DEPTORQ8TB45 409 aa22.68■■□□□ 1.22
SNX13-206ENST00000474067 POP1Q99575 1024 aaKnown RBP22.68■■□□□ 1.22
SNX13-206ENST00000474067 TIPINQ9BVW5 301 aa22.68■■□□□ 1.22
SNX13-206ENST00000474067 CSRNP2Q9H175 543 aa22.68■■□□□ 1.22
SNX13-206ENST00000474067 IGFLR1Q9H665 355 aa22.68■■□□□ 1.22
SNX13-206ENST00000474067 PRKAG3Q9UGI9 489 aa22.68■■□□□ 1.22
SNX13-206ENST00000474067 KIAA1024Q9UPX6 916 aa22.68■■□□□ 1.22
SNX13-206ENST00000474067 ZMYM2Q9UBW7 1377 aa22.67■■□□□ 1.22
SNX13-206ENST00000474067 RBAK-RBAKDNI3L0D1 243 aa22.67■■□□□ 1.22
SNX13-206ENST00000474067 SLC26A4O43511 780 aa22.67■■□□□ 1.22
SNX13-206ENST00000474067 TSPAN1O60635 241 aa22.67■■□□□ 1.22
SNX13-206ENST00000474067 TOB1P50616 345 aaPredicted RBP22.67■■□□□ 1.22
SNX13-206ENST00000474067 EFNA5P52803 228 aa22.67■■□□□ 1.22
SNX13-206ENST00000474067 BCAR1P56945 870 aa22.67■■□□□ 1.22
SNX13-206ENST00000474067 ATP2C1P98194 919 aaPredicted RBP22.67■■□□□ 1.22
SNX13-206ENST00000474067 MBTD1Q05BQ5 628 aa22.67■■□□□ 1.22
SNX13-206ENST00000474067 CAMK1Q14012 370 aa22.67■■□□□ 1.22
SNX13-206ENST00000474067 TMEM132AQ24JP5 1023 aa22.67■■□□□ 1.22
SNX13-206ENST00000474067 SLC27A1Q6PCB7 646 aa22.67■■□□□ 1.22
SNX13-206ENST00000474067 PPP4R3CPQ6ZMV5 832 aa22.67■■□□□ 1.22
SNX13-206ENST00000474067 LRRC55Q6ZSA7 311 aa22.67■■□□□ 1.22
SNX13-206ENST00000474067 TMC7Q7Z402 723 aa22.67■■□□□ 1.22
SNX13-206ENST00000474067 ASAP3Q8TDY4 903 aa22.67■■□□□ 1.22
SNX13-206ENST00000474067 CDK5RAP3Q96JB5 506 aa22.67■■□□□ 1.22
SNX13-206ENST00000474067 TCF25Q9BQ70 676 aa22.67■■□□□ 1.22
SNX13-206ENST00000474067 ADPGKQ9BRR6 497 aa22.67■■□□□ 1.22
SNX13-206ENST00000474067 BACH2Q9BYV9 841 aa22.67■■□□□ 1.22
SNX13-206ENST00000474067 MINDY3Q9H8M7 445 aa22.67■■□□□ 1.22
SNX13-206ENST00000474067 INPP5FQ9Y2H2 1132 aa22.67■■□□□ 1.22
SNX13-206ENST00000474067 ZC3H11AO75152 810 aaKnown RBP eCLIP22.66■■□□□ 1.22
SNX13-206ENST00000474067 OFD1O75665 1012 aa22.66■■□□□ 1.22
SNX13-206ENST00000474067 CSPG5O95196 566 aa22.66■■□□□ 1.22
SNX13-206ENST00000474067 HOXA11P31270 313 aaPredicted RBP22.66■■□□□ 1.22
SNX13-206ENST00000474067 NRIP1P48552 1158 aa22.66■■□□□ 1.22
SNX13-206ENST00000474067 ADAM15Q13444 863 aa22.66■■□□□ 1.22
SNX13-206ENST00000474067 SMC1AQ14683 1233 aaKnown RBP22.66■■□□□ 1.22
SNX13-206ENST00000474067 MAPK6Q16659 721 aa22.66■■□□□ 1.22
SNX13-206ENST00000474067 SLC39A11Q8N1S5 342 aa22.66■■□□□ 1.22
SNX13-206ENST00000474067 AK8Q96MA6 479 aa22.66■■□□□ 1.22
SNX13-206ENST00000474067 TMEM175Q9BSA9 504 aa22.66■■□□□ 1.22
SNX13-206ENST00000474067 BHMT2Q9H2M3 363 aa22.66■■□□□ 1.22
SNX13-206ENST00000474067 DDX19AQ9NUU7 478 aaKnown RBP22.66■■□□□ 1.22
SNX13-206ENST00000474067 TBC1D13Q9NVG8 400 aa22.66■■□□□ 1.22
SNX13-206ENST00000474067 GRXCR2A6NFK2 248 aa22.65■■□□□ 1.22
SNX13-206ENST00000474067 CD2BP2O95400 341 aaKnown RBP22.65■■□□□ 1.22
SNX13-206ENST00000474067 EYA4O95677 639 aa22.65■■□□□ 1.22
SNX13-206ENST00000474067 DNAJB1P25685 340 aa22.65■■□□□ 1.22
SNX13-206ENST00000474067 CUL4AQ13619 759 aa22.65■■□□□ 1.22
SNX13-206ENST00000474067 NBR1Q14596 966 aa22.65■■□□□ 1.22
SNX13-206ENST00000474067 FAM187BQ17R55 369 aa22.65■■□□□ 1.22
SNX13-206ENST00000474067 CDCA2Q69YH5 1023 aaPredicted RBP22.65■■□□□ 1.22
SNX13-206ENST00000474067 MAEAQ7L5Y9 396 aa22.65■■□□□ 1.22
SNX13-206ENST00000474067 GADD45GIP1Q8TAE8 222 aaPredicted RBP22.65■■□□□ 1.22
SNX13-206ENST00000474067 DRC1Q96MC2 740 aa22.65■■□□□ 1.22
SNX13-206ENST00000474067 C17orf75Q9HAS0 396 aa22.65■■□□□ 1.22
SNX13-206ENST00000474067 CD207Q9UJ71 328 aa22.65■■□□□ 1.22
SNX13-206ENST00000474067 GIT1Q9Y2X7 761 aa22.65■■□□□ 1.22
SNX13-206ENST00000474067 PRUNE2Q8WUY3 3088 aa22.65■■□□□ 1.22
SNX13-206ENST00000474067 PLXNA4Q9HCM2 1894 aa22.64■■□□□ 1.22
SNX13-206ENST00000474067 H3BQ06 376 aaPredicted RBP22.64■■□□□ 1.21
SNX13-206ENST00000474067 FSCN2O14926 492 aa22.64■■□□□ 1.21
SNX13-206ENST00000474067 N4BP3O15049 544 aa22.64■■□□□ 1.21
SNX13-206ENST00000474067 ALDH2P05091 517 aa22.64■■□□□ 1.21
SNX13-206ENST00000474067 IRS1P35568 1242 aa22.64■■□□□ 1.21
SNX13-206ENST00000474067 SMAD4Q13485 552 aaKnown RBP22.64■■□□□ 1.21
SNX13-206ENST00000474067 LPPQ93052 612 aa22.64■■□□□ 1.21
SNX13-206ENST00000474067 INTS4Q96HW7 963 aaKnown RBP22.64■■□□□ 1.21
SNX13-206ENST00000474067 KCND2Q9NZV8 630 aa22.64■■□□□ 1.21
SNX13-206ENST00000474067 IPPQ9Y573 584 aa22.64■■□□□ 1.21
SNX13-206ENST00000474067 A0A1B0GUA9 196 aa22.63■■□□□ 1.21
SNX13-206ENST00000474067 ARF4P18085 180 aaPredicted RBP22.63■■□□□ 1.21
SNX13-206ENST00000474067 DUSP6Q16828 381 aa22.63■■□□□ 1.21
SNX13-206ENST00000474067 UBXN11Q5T124 520 aa22.63■■□□□ 1.21
SNX13-206ENST00000474067 SSX2IPQ9Y2D8 614 aa22.63■■□□□ 1.21
SNX13-206ENST00000474067 PDIA4P13667 645 aaKnown RBP22.62■■□□□ 1.21
SNX13-206ENST00000474067 DMP1Q13316 513 aaPredicted RBP22.62■■□□□ 1.21
SNX13-206ENST00000474067 PRPF4BQ13523 1007 aaKnown RBP22.62■■□□□ 1.21
SNX13-206ENST00000474067 PLPP4Q5VZY2 271 aa22.62■■□□□ 1.21
SNX13-206ENST00000474067 AGMOQ6ZNB7 445 aa22.62■■□□□ 1.21
SNX13-206ENST00000474067 DDX53Q86TM3 631 aaKnown RBP22.62■■□□□ 1.21
SNX13-206ENST00000474067 RBM23Q86U06 439 aaKnown RBP22.62■■□□□ 1.21
SNX13-206ENST00000474067 RPS6KC1Q96S38 1066 aa22.62■■□□□ 1.21
SNX13-206ENST00000474067 C1QTNF1Q9BXJ1 281 aa22.62■■□□□ 1.21
SNX13-206ENST00000474067 NRDE2Q9H7Z3 1164 aa22.62■■□□□ 1.21
SNX13-206ENST00000474067 GPRC5CQ9NQ84 441 aa22.62■■□□□ 1.21
SNX13-206ENST00000474067 HCSTQ9UBK5 93 aa22.62■■□□□ 1.21
SNX13-206ENST00000474067 FAN1Q9Y2M0 1017 aa22.62■■□□□ 1.21
SNX13-206ENST00000474067 INPPL1O15357 1258 aa22.61■■□□□ 1.21
SNX13-206ENST00000474067 CA8P35219 290 aa22.61■■□□□ 1.21
SNX13-206ENST00000474067 ERVFC1P60507 584 aa22.61■■□□□ 1.21
SNX13-206ENST00000474067 COASYQ13057 564 aa22.61■■□□□ 1.21
SNX13-206ENST00000474067 AMHR2Q16671 573 aa22.61■■□□□ 1.21
SNX13-206ENST00000474067 LONRF3Q496Y0 759 aa22.61■■□□□ 1.21
SNX13-206ENST00000474067 FAM178BQ8IXR5 827 aa22.61■■□□□ 1.21
SNX13-206ENST00000474067 CALML4Q96GE6 196 aa22.61■■□□□ 1.21
SNX13-206ENST00000474067 IGSF21Q96ID5 467 aa22.61■■□□□ 1.21
SNX13-206ENST00000474067 CPB2Q96IY4 423 aa22.61■■□□□ 1.21
SNX13-206ENST00000474067 GBP3Q9H0R5 595 aa22.61■■□□□ 1.21
SNX13-206ENST00000474067 FZD8Q9H461 694 aa22.61■■□□□ 1.21
SNX13-206ENST00000474067 RBM19Q9Y4C8 960 aaKnown RBP22.61■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms