RNA–Protein interactions for RNA: ENST00000473602.1

SHROOM3-204, Transcript of shroom family member 3, humanhuman

TSL 3

Gene SHROOM3, Length 789 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-204ENST00000473602 NBR1Q14596 966 aa14.41□□□□□ -0.1
SHROOM3-204ENST00000473602 PCBP1Q15365 356 aaKnown RBP eCLIP14.41□□□□□ -0.1
SHROOM3-204ENST00000473602 SRGAP1Q7Z6B7 1085 aa14.41□□□□□ -0.1
SHROOM3-204ENST00000473602 FERMT3Q86UX7 667 aa14.41□□□□□ -0.1
SHROOM3-204ENST00000473602 IGSF22Q8N9C0 903 aa14.41□□□□□ -0.1
SHROOM3-204ENST00000473602 VN1R2Q8NFZ6 395 aa14.41□□□□□ -0.1
SHROOM3-204ENST00000473602 PRPF31Q8WWY3 499 aaKnown RBP14.41□□□□□ -0.1
SHROOM3-204ENST00000473602 RSPH1Q8WYR4 309 aa14.41□□□□□ -0.1
SHROOM3-204ENST00000473602 SUSD6Q92537 303 aa14.41□□□□□ -0.1
SHROOM3-204ENST00000473602 TMEM143Q96AN5 459 aa14.41□□□□□ -0.1
SHROOM3-204ENST00000473602 INTS4Q96HW7 963 aaKnown RBP14.41□□□□□ -0.1
SHROOM3-204ENST00000473602 TRAIPQ9BWF2 469 aa14.41□□□□□ -0.1
SHROOM3-204ENST00000473602 IFT122Q9HBG6 1241 aa14.41□□□□□ -0.1
SHROOM3-204ENST00000473602 XPNPEP1Q9NQW7 623 aa14.41□□□□□ -0.1
SHROOM3-204ENST00000473602 LRWD1Q9UFC0 647 aa14.41□□□□□ -0.1
SHROOM3-204ENST00000473602 ATG2AQ2TAZ0 1938 aa14.41□□□□□ -0.1
SHROOM3-204ENST00000473602 MED24O75448 989 aa14.4□□□□□ -0.1
SHROOM3-204ENST00000473602 SKIP12755 728 aa14.4□□□□□ -0.1
SHROOM3-204ENST00000473602 ATF7P17544 494 aaPredicted RBP14.4□□□□□ -0.1
SHROOM3-204ENST00000473602 ERVFC1P60507 584 aa14.4□□□□□ -0.1
SHROOM3-204ENST00000473602 POU5F1BQ06416 359 aa14.4□□□□□ -0.1
SHROOM3-204ENST00000473602 LAMTOR4Q0VGL1 99 aa14.4□□□□□ -0.1
SHROOM3-204ENST00000473602 TFDP1Q14186 410 aa14.4□□□□□ -0.1
SHROOM3-204ENST00000473602 DUSP6Q16828 381 aa14.4□□□□□ -0.1
SHROOM3-204ENST00000473602 SPOUT1Q5T280 376 aaKnown RBP14.4□□□□□ -0.1
SHROOM3-204ENST00000473602 BRAPQ7Z569 592 aa14.4□□□□□ -0.1
SHROOM3-204ENST00000473602 KSR1Q8IVT5 923 aa14.4□□□□□ -0.1
SHROOM3-204ENST00000473602 PIGOQ8TEQ8 1089 aa14.4□□□□□ -0.1
SHROOM3-204ENST00000473602 TLR9Q9NR96 1032 aa14.4□□□□□ -0.1
SHROOM3-204ENST00000473602 PCDHB12Q9Y5F1 795 aa14.4□□□□□ -0.1
SHROOM3-204ENST00000473602 DMDP11532 3685 aa14.4□□□□□ -0.1
SHROOM3-204ENST00000473602 A0A0U1RQF3 1178 aa14.39□□□□□ -0.11
SHROOM3-204ENST00000473602 H0Y858 1186 aa14.39□□□□□ -0.11
SHROOM3-204ENST00000473602 K7ELQ4 463 aaPredicted RBP14.39□□□□□ -0.11
SHROOM3-204ENST00000473602 EOMESO95936 686 aa14.39□□□□□ -0.11
SHROOM3-204ENST00000473602 PHKA2P46019 1235 aa14.39□□□□□ -0.11
SHROOM3-204ENST00000473602 RAB27AP51159 221 aa14.39□□□□□ -0.11
SHROOM3-204ENST00000473602 ATP2C1P98194 919 aaPredicted RBP14.39□□□□□ -0.11
SHROOM3-204ENST00000473602 UBE3AQ05086 875 aa14.39□□□□□ -0.11
SHROOM3-204ENST00000473602 PTPN21Q16825 1174 aa14.39□□□□□ -0.11
SHROOM3-204ENST00000473602 POTEGQ6S5H5 508 aa14.39□□□□□ -0.11
SHROOM3-204ENST00000473602 DTHD1Q6ZMT9 781 aa14.39□□□□□ -0.11
SHROOM3-204ENST00000473602 CATSPER4Q7RTX7 472 aa14.39□□□□□ -0.11
SHROOM3-204ENST00000473602 ECHDC2Q86YB7 292 aa14.39□□□□□ -0.11
SHROOM3-204ENST00000473602 IFNLR1Q8IU57 520 aaPredicted RBP14.39□□□□□ -0.11
SHROOM3-204ENST00000473602 RNF149Q8NC42 400 aa14.39□□□□□ -0.11
SHROOM3-204ENST00000473602 MCPH1Q8NEM0 835 aa14.39□□□□□ -0.11
SHROOM3-204ENST00000473602 CDCA3Q99618 268 aaPredicted RBP14.39□□□□□ -0.11
SHROOM3-204ENST00000473602 IRF2BPLQ9H1B7 796 aa14.39□□□□□ -0.11
SHROOM3-204ENST00000473602 AAASQ9NRG9 546 aa14.39□□□□□ -0.11
SHROOM3-204ENST00000473602 BMP2KQ9NSY1 1161 aaPredicted RBP14.39□□□□□ -0.11
SHROOM3-204ENST00000473602 AGPAT5Q9NUQ2 364 aa14.39□□□□□ -0.11
SHROOM3-204ENST00000473602 TBKBP1A7MCY6 615 aa14.38□□□□□ -0.11
SHROOM3-204ENST00000473602 USO1O60763 962 aaKnown RBP14.38□□□□□ -0.11
SHROOM3-204ENST00000473602 CSDE1O75534 798 aaKnown RBP14.38□□□□□ -0.11
SHROOM3-204ENST00000473602 FGF18O76093 207 aa14.38□□□□□ -0.11
SHROOM3-204ENST00000473602 BMP15O95972 392 aa14.38□□□□□ -0.11
SHROOM3-204ENST00000473602 PDGFBP01127 241 aaPredicted RBP14.38□□□□□ -0.11
SHROOM3-204ENST00000473602 SRGAP2CP0DJJ0 459 aa14.38□□□□□ -0.11
SHROOM3-204ENST00000473602 FGFR4P22455 802 aa14.38□□□□□ -0.11
SHROOM3-204ENST00000473602 ARL2P36404 184 aa14.38□□□□□ -0.11
SHROOM3-204ENST00000473602 CCT6AP40227 531 aaKnown RBP14.38□□□□□ -0.11
SHROOM3-204ENST00000473602 FAM102BQ5T8I3 360 aa14.38□□□□□ -0.11
SHROOM3-204ENST00000473602 ARL6IP4Q66PJ3 421 aaKnown RBP14.38□□□□□ -0.11
SHROOM3-204ENST00000473602 KCTD17Q8N5Z5 321 aa14.38□□□□□ -0.11
SHROOM3-204ENST00000473602 APOL5Q9BWW9 433 aa14.38□□□□□ -0.11
SHROOM3-204ENST00000473602 NFKBIZQ9BYH8 718 aa14.38□□□□□ -0.11
SHROOM3-204ENST00000473602 TMEM117Q9H0C3 514 aa14.38□□□□□ -0.11
SHROOM3-204ENST00000473602 S1PR5Q9H228 398 aa14.38□□□□□ -0.11
SHROOM3-204ENST00000473602 PIN4Q9Y237 131 aaKnown RBP14.38□□□□□ -0.11
SHROOM3-204ENST00000473602 RIF1Q5UIP0 2472 aaKnown RBP14.37□□□□□ -0.11
SHROOM3-204ENST00000473602 ARHGEF35A5YM69 484 aa14.37□□□□□ -0.11
SHROOM3-204ENST00000473602 ERLIN2O94905 339 aa14.37□□□□□ -0.11
SHROOM3-204ENST00000473602 SP100P23497 879 aaPredicted RBP14.37□□□□□ -0.11
SHROOM3-204ENST00000473602 AXLP30530 894 aa14.37□□□□□ -0.11
SHROOM3-204ENST00000473602 PTENP60484 403 aa14.37□□□□□ -0.11
SHROOM3-204ENST00000473602 KRT79Q5XKE5 535 aa14.37□□□□□ -0.11
SHROOM3-204ENST00000473602 TWF2Q6IBS0 349 aaKnown RBP14.37□□□□□ -0.11
SHROOM3-204ENST00000473602 TMEM184AQ6ZMB5 413 aa14.37□□□□□ -0.11
SHROOM3-204ENST00000473602 ZBTB33Q86T24 672 aa14.37□□□□□ -0.11
SHROOM3-204ENST00000473602 ZNF598Q86UK7 904 aaKnown RBP14.37□□□□□ -0.11
SHROOM3-204ENST00000473602 THNSL1Q8IYQ7 743 aa14.37□□□□□ -0.11
SHROOM3-204ENST00000473602 ABI1Q8IZP0 508 aa14.37□□□□□ -0.11
SHROOM3-204ENST00000473602 SNX29Q8TEQ0 813 aa14.37□□□□□ -0.11
SHROOM3-204ENST00000473602 SNX21Q969T3 373 aa14.37□□□□□ -0.11
SHROOM3-204ENST00000473602 RIPOR3Q96MK2 946 aa14.37□□□□□ -0.11
SHROOM3-204ENST00000473602 TYW1Q9NV66 732 aaKnown RBP14.37□□□□□ -0.11
SHROOM3-204ENST00000473602 HCSTQ9UBK5 93 aa14.37□□□□□ -0.11
SHROOM3-204ENST00000473602 PLXNA4Q9HCM2 1894 aa14.37□□□□□ -0.11
SHROOM3-204ENST00000473602 SPTBN4Q9H254 2564 aa14.36□□□□□ -0.11
SHROOM3-204ENST00000473602 FSD2A1L4K1 749 aa14.36□□□□□ -0.11
SHROOM3-204ENST00000473602 VPS37CA5D8V6 355 aaPredicted RBP14.36□□□□□ -0.11
SHROOM3-204ENST00000473602 FSCN2O14926 492 aa14.36□□□□□ -0.11
SHROOM3-204ENST00000473602 ZNF623O75123 536 aa14.36□□□□□ -0.11
SHROOM3-204ENST00000473602 FGFR1P11362 822 aa14.36□□□□□ -0.11
SHROOM3-204ENST00000473602 CYP11B2P19099 503 aa14.36□□□□□ -0.11
SHROOM3-204ENST00000473602 GLRA2P23416 452 aa14.36□□□□□ -0.11
SHROOM3-204ENST00000473602 NCBP1Q09161 790 aaKnown RBP14.36□□□□□ -0.11
SHROOM3-204ENST00000473602 CAPSQ13938 189 aa14.36□□□□□ -0.11
SHROOM3-204ENST00000473602 KCNC3Q14003 757 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms