RNA–Protein interactions for RNA: ENST00000472223.5

CCM2-205, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 981 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-205ENST00000472223 HSP90AA2PQ14568 343 aaPredicted RBP18.5■□□□□ 0.55
CCM2-205ENST00000472223 FAM187BQ17R55 369 aa18.5■□□□□ 0.55
CCM2-205ENST00000472223 ZSCAN23Q3MJ62 389 aa18.5■□□□□ 0.55
CCM2-205ENST00000472223 HS2ST1Q7LGA3 356 aa18.5■□□□□ 0.55
CCM2-205ENST00000472223 GUF1Q8N442 669 aaKnown RBP18.5■□□□□ 0.55
CCM2-205ENST00000472223 GOLGA5Q8TBA6 731 aa18.5■□□□□ 0.55
CCM2-205ENST00000472223 KCNN1Q92952 543 aa18.5■□□□□ 0.55
CCM2-205ENST00000472223 FIZ1Q96SL8 496 aa18.5■□□□□ 0.55
CCM2-205ENST00000472223 TSG101Q99816 390 aa18.5■□□□□ 0.55
CCM2-205ENST00000472223 ADPGKQ9BRR6 497 aa18.5■□□□□ 0.55
CCM2-205ENST00000472223 TCHPQ9BT92 498 aa18.5■□□□□ 0.55
CCM2-205ENST00000472223 GZF1Q9H116 711 aaPredicted RBP18.5■□□□□ 0.55
CCM2-205ENST00000472223 FZD8Q9H461 694 aa18.5■□□□□ 0.55
CCM2-205ENST00000472223 NOC2LQ9Y3T9 749 aaKnown RBP18.5■□□□□ 0.55
CCM2-205ENST00000472223 ADGRA3Q8IWK6 1321 aa18.49■□□□□ 0.55
CCM2-205ENST00000472223 TRIM43BA6NCK2 446 aa18.49■□□□□ 0.55
CCM2-205ENST00000472223 HNRNPDLO14979 420 aaKnown RBP18.49■□□□□ 0.55
CCM2-205ENST00000472223 CSDE1O75534 798 aaKnown RBP18.49■□□□□ 0.55
CCM2-205ENST00000472223 SNRPFP62306 86 aaKnown RBP18.49■□□□□ 0.55
CCM2-205ENST00000472223 LPIN1Q14693 890 aa18.49■□□□□ 0.55
CCM2-205ENST00000472223 KNOP1Q1ED39 458 aaKnown RBP18.49■□□□□ 0.55
CCM2-205ENST00000472223 COBLL1Q53SF7 1204 aa18.49■□□□□ 0.55
CCM2-205ENST00000472223 CT47A1Q5JQC4 288 aaPredicted RBP18.49■□□□□ 0.55
CCM2-205ENST00000472223 SLFN12LQ6IEE8 588 aa18.49■□□□□ 0.55
CCM2-205ENST00000472223 MFSD5Q6N075 450 aa18.49■□□□□ 0.55
CCM2-205ENST00000472223 ZPBP2Q6X784 338 aa18.49■□□□□ 0.55
CCM2-205ENST00000472223 PPP4R3CPQ6ZMV5 832 aa18.49■□□□□ 0.55
CCM2-205ENST00000472223 NELFCDQ8IXH7 590 aa18.49■□□□□ 0.55
CCM2-205ENST00000472223 KIAA0895Q8NCT3 520 aa18.49■□□□□ 0.55
CCM2-205ENST00000472223 SCFD1Q8WVM8 642 aa18.49■□□□□ 0.55
CCM2-205ENST00000472223 APBB2Q92870 758 aa18.49■□□□□ 0.55
CCM2-205ENST00000472223 TRIM43Q96BQ3 446 aaPredicted RBP18.49■□□□□ 0.55
CCM2-205ENST00000472223 DHTKD1Q96HY7 919 aaPredicted RBP18.49■□□□□ 0.55
CCM2-205ENST00000472223 SCLYQ96I15 445 aa18.49■□□□□ 0.55
CCM2-205ENST00000472223 FTHL17Q9BXU8 183 aa18.49■□□□□ 0.55
CCM2-205ENST00000472223 IFIH1Q9BYX4 1025 aaKnown RBP18.49■□□□□ 0.55
CCM2-205ENST00000472223 CHST12Q9NRB3 414 aa18.49■□□□□ 0.55
CCM2-205ENST00000472223 CGNQ9P2M7 1197 aaKnown RBP18.49■□□□□ 0.55
CCM2-205ENST00000472223 PADI3Q9ULW8 664 aa18.49■□□□□ 0.55
CCM2-205ENST00000472223 ST3GAL5Q9UNP4 418 aa18.49■□□□□ 0.55
CCM2-205ENST00000472223 MAPK8IP1Q9UQF2 711 aa18.49■□□□□ 0.55
CCM2-205ENST00000472223 BICDL2A1A5D9 508 aa18.48■□□□□ 0.55
CCM2-205ENST00000472223 N4BP3O15049 544 aa18.48■□□□□ 0.55
CCM2-205ENST00000472223 CALUO43852 315 aaPredicted RBP18.48■□□□□ 0.55
CCM2-205ENST00000472223 PFKMP08237 780 aa18.48■□□□□ 0.55
CCM2-205ENST00000472223 PRCPP42785 496 aa18.48■□□□□ 0.55
CCM2-205ENST00000472223 CASP5P51878 434 aa18.48■□□□□ 0.55
CCM2-205ENST00000472223 BMT2Q1RMZ1 405 aa18.48■□□□□ 0.55
CCM2-205ENST00000472223 NOTUMQ6P988 496 aa18.48■□□□□ 0.55
CCM2-205ENST00000472223 EPM2AIP1Q7L775 607 aaPredicted RBP18.48■□□□□ 0.55
CCM2-205ENST00000472223 MAP4K3Q8IVH8 894 aa18.48■□□□□ 0.55
CCM2-205ENST00000472223 SMYD4Q8IYR2 804 aaPredicted RBP18.48■□□□□ 0.55
CCM2-205ENST00000472223 TMEM40Q8WWA1 233 aa18.48■□□□□ 0.55
CCM2-205ENST00000472223 TRIM6Q9C030 488 aaPredicted RBP18.48■□□□□ 0.55
CCM2-205ENST00000472223 CCDC113Q9H0I3 377 aa18.48■□□□□ 0.55
CCM2-205ENST00000472223 GBP3Q9H0R5 595 aa18.48■□□□□ 0.55
CCM2-205ENST00000472223 MINDY3Q9H8M7 445 aa18.48■□□□□ 0.55
CCM2-205ENST00000472223 RNF216Q9NWF9 866 aaPredicted RBP18.48■□□□□ 0.55
CCM2-205ENST00000472223 PIN4Q9Y237 131 aaKnown RBP18.48■□□□□ 0.55
CCM2-205ENST00000472223 PPP1R37O75864 691 aa18.47■□□□□ 0.55
CCM2-205ENST00000472223 ACTN1P12814 892 aa18.47■□□□□ 0.55
CCM2-205ENST00000472223 FGFR4P22455 802 aa18.47■□□□□ 0.55
CCM2-205ENST00000472223 CD52P31358 61 aa18.47■□□□□ 0.55
CCM2-205ENST00000472223 TYRO3Q06418 890 aa18.47■□□□□ 0.55
CCM2-205ENST00000472223 PPIGQ13427 754 aaKnown RBP eCLIP18.47■□□□□ 0.55
CCM2-205ENST00000472223 ATF7IP2Q5U623 682 aa18.47■□□□□ 0.55
CCM2-205ENST00000472223 KLHL10Q6JEL2 608 aa18.47■□□□□ 0.55
CCM2-205ENST00000472223 DEFB128Q7Z7B8 93 aa18.47■□□□□ 0.55
CCM2-205ENST00000472223 FAM228AQ86W67 206 aa18.47■□□□□ 0.55
CCM2-205ENST00000472223 ADSSL1Q8N142 457 aa18.47■□□□□ 0.55
CCM2-205ENST00000472223 CCDC51Q96ER9 411 aa18.47■□□□□ 0.55
CCM2-205ENST00000472223 STRA6Q9BX79 667 aa18.47■□□□□ 0.55
CCM2-205ENST00000472223 WNT8AQ9H1J5 351 aa18.47■□□□□ 0.55
CCM2-205ENST00000472223 AGPAT5Q9NUQ2 364 aa18.47■□□□□ 0.55
CCM2-205ENST00000472223 UMODL1Q5DID0 1318 aa18.47■□□□□ 0.55
CCM2-205ENST00000472223 CNTNAP2Q9UHC6 1331 aa18.47■□□□□ 0.55
CCM2-205ENST00000472223 CLDN3O15551 220 aa18.46■□□□□ 0.55
CCM2-205ENST00000472223 TSPAN1O60635 241 aa18.46■□□□□ 0.55
CCM2-205ENST00000472223 TOM1L1O75674 476 aa18.46■□□□□ 0.55
CCM2-205ENST00000472223 SKIP12755 728 aa18.46■□□□□ 0.55
CCM2-205ENST00000472223 RPL13P26373 211 aaKnown RBP18.46■□□□□ 0.55
CCM2-205ENST00000472223 FPGSQ05932 587 aa18.46■□□□□ 0.55
CCM2-205ENST00000472223 PAK1Q13153 545 aa18.46■□□□□ 0.55
CCM2-205ENST00000472223 TPD52L1Q16890 204 aaPredicted RBP18.46■□□□□ 0.55
CCM2-205ENST00000472223 TWF2Q6IBS0 349 aaKnown RBP18.46■□□□□ 0.55
CCM2-205ENST00000472223 TRAF7Q6Q0C0 670 aa18.46■□□□□ 0.55
CCM2-205ENST00000472223 HACE1Q8IYU2 909 aa18.46■□□□□ 0.55
CCM2-205ENST00000472223 ACO2Q99798 780 aaKnown RBP18.46■□□□□ 0.55
CCM2-205ENST00000472223 TARS2Q9BW92 718 aaKnown RBP18.46■□□□□ 0.55
CCM2-205ENST00000472223 FGFBP2Q9BYJ0 223 aa18.46■□□□□ 0.55
CCM2-205ENST00000472223 ERVK-5Q9HDB9 667 aa18.46■□□□□ 0.55
CCM2-205ENST00000472223 TYW1Q9NV66 732 aaKnown RBP18.46■□□□□ 0.55
CCM2-205ENST00000472223 TANC1Q9C0D5 1861 aa18.46■□□□□ 0.54
CCM2-205ENST00000472223 ALPK3Q96L96 1907 aa18.45■□□□□ 0.54
CCM2-205ENST00000472223 PDXKO00764 312 aa18.45■□□□□ 0.54
CCM2-205ENST00000472223 KIAA0391O15091 583 aaKnown RBP18.45■□□□□ 0.54
CCM2-205ENST00000472223 NBNO60934 754 aa18.45■□□□□ 0.54
CCM2-205ENST00000472223 FGFR1OPO95684 399 aaKnown RBP18.45■□□□□ 0.54
CCM2-205ENST00000472223 CAVIN2O95810 425 aa18.45■□□□□ 0.54
CCM2-205ENST00000472223 PIGRP01833 764 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms