RNA–Protein interactions for RNA: ENST00000469479.1

VPS8-219, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 4

Gene VPS8, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-219ENST00000469479 DDX41Q9UJV9 622 aaKnown RBP6.29□□□□□ -1.4
VPS8-219ENST00000469479 HDAC9Q9UKV0 1011 aa6.29□□□□□ -1.4
VPS8-219ENST00000469479 FBXO21O94952 628 aa6.28□□□□□ -1.4
VPS8-219ENST00000469479 KNG1P01042 644 aa6.28□□□□□ -1.4
VPS8-219ENST00000469479 CSF2RBP32927 897 aa6.28□□□□□ -1.4
VPS8-219ENST00000469479 TNIP1Q15025 636 aa6.28□□□□□ -1.4
VPS8-219ENST00000469479 ZNF568Q3ZCX4 644 aa6.28□□□□□ -1.4
VPS8-219ENST00000469479 DTX3Q8N9I9 347 aa6.28□□□□□ -1.4
VPS8-219ENST00000469479 RCBTB1Q8NDN9 531 aa6.28□□□□□ -1.4
VPS8-219ENST00000469479 SUPT20HQ8NEM7 779 aa6.28□□□□□ -1.4
VPS8-219ENST00000469479 TTLL11Q8NHH1 800 aa6.28□□□□□ -1.4
VPS8-219ENST00000469479 CHAMP1Q96JM3 812 aa6.28□□□□□ -1.4
VPS8-219ENST00000469479 CCDC140Q96MF4 163 aa6.28□□□□□ -1.4
VPS8-219ENST00000469479 GLIS2Q9BZE0 524 aaPredicted RBP6.28□□□□□ -1.4
VPS8-219ENST00000469479 NYXQ9GZU5 481 aa6.28□□□□□ -1.4
VPS8-219ENST00000469479 TMEFF2Q9UIK5 374 aaPredicted RBP6.28□□□□□ -1.4
VPS8-219ENST00000469479 KIF7Q2M1P5 1343 aa6.27□□□□□ -1.41
VPS8-219ENST00000469479 RIC1Q4ADV7 1423 aa6.27□□□□□ -1.41
VPS8-219ENST00000469479 H7C1D1 291 aa6.27□□□□□ -1.41
VPS8-219ENST00000469479 ARNTLO00327 626 aa6.27□□□□□ -1.41
VPS8-219ENST00000469479 RNMTO43148 476 aaKnown RBP6.27□□□□□ -1.41
VPS8-219ENST00000469479 CAMTA2O94983 1202 aa6.27□□□□□ -1.41
VPS8-219ENST00000469479 CPP00450 1065 aa6.27□□□□□ -1.41
VPS8-219ENST00000469479 SCG5P05408 212 aa6.27□□□□□ -1.41
VPS8-219ENST00000469479 RACK1P63244 317 aaKnown RBP6.27□□□□□ -1.41
VPS8-219ENST00000469479 FKBP1BP68106 108 aa6.27□□□□□ -1.41
VPS8-219ENST00000469479 KIF23Q02241 960 aaPredicted RBP6.27□□□□□ -1.41
VPS8-219ENST00000469479 NCAPHQ15003 741 aa6.27□□□□□ -1.41
VPS8-219ENST00000469479 CRY2Q49AN0 593 aa6.27□□□□□ -1.41
VPS8-219ENST00000469479 SLC17A8Q8NDX2 589 aa6.27□□□□□ -1.41
VPS8-219ENST00000469479 PPP1R14AQ96A00 147 aa6.27□□□□□ -1.41
VPS8-219ENST00000469479 NEIL1Q96FI4 390 aaPredicted RBP6.27□□□□□ -1.41
VPS8-219ENST00000469479 GBA2Q9HCG7 927 aaPredicted RBP6.27□□□□□ -1.41
VPS8-219ENST00000469479 CLDND1Q9NY35 253 aa6.27□□□□□ -1.41
VPS8-219ENST00000469479 ASH2LQ9UBL3 628 aa6.27□□□□□ -1.41
VPS8-219ENST00000469479 PCDHA2Q9Y5H9 948 aa6.27□□□□□ -1.41
VPS8-219ENST00000469479 NPC1L1Q9UHC9 1359 aa6.27□□□□□ -1.41
VPS8-219ENST00000469479 SCN11AQ9UI33 1791 aa6.26□□□□□ -1.41
VPS8-219ENST00000469479 SNED1Q8TER0 1413 aa6.26□□□□□ -1.41
VPS8-219ENST00000469479 PCSK5Q92824 1860 aa6.26□□□□□ -1.41
VPS8-219ENST00000469479 KRIT1O00522 736 aa6.26□□□□□ -1.41
VPS8-219ENST00000469479 RAD17O75943 681 aa6.26□□□□□ -1.41
VPS8-219ENST00000469479 LTBRP36941 435 aa6.26□□□□□ -1.41
VPS8-219ENST00000469479 GMPSP49915 693 aaPredicted RBP6.26□□□□□ -1.41
VPS8-219ENST00000469479 PAK2Q13177 524 aa6.26□□□□□ -1.41
VPS8-219ENST00000469479 SLC39A6Q13433 755 aa6.26□□□□□ -1.41
VPS8-219ENST00000469479 PROSER1Q86XN7 944 aa6.26□□□□□ -1.41
VPS8-219ENST00000469479 RPGRQ92834 1020 aaKnown RBP6.26□□□□□ -1.41
VPS8-219ENST00000469479 SIN3AQ96ST3 1273 aa6.26□□□□□ -1.41
VPS8-219ENST00000469479 KATNBL1Q9H079 304 aa6.26□□□□□ -1.41
VPS8-219ENST00000469479 FBXL7Q9UJT9 491 aa6.26□□□□□ -1.41
VPS8-219ENST00000469479 HEG1Q9ULI3 1381 aa6.26□□□□□ -1.41
VPS8-219ENST00000469479 PPIP5K2O43314 1243 aa6.25□□□□□ -1.41
VPS8-219ENST00000469479 SNRPB2P08579 225 aaKnown RBP6.25□□□□□ -1.41
VPS8-219ENST00000469479 ACO1P21399 889 aaKnown RBP6.25□□□□□ -1.41
VPS8-219ENST00000469479 ECI1P42126 302 aa6.25□□□□□ -1.41
VPS8-219ENST00000469479 RAC3P60763 192 aa6.25□□□□□ -1.41
VPS8-219ENST00000469479 TEFQ10587 303 aa6.25□□□□□ -1.41
VPS8-219ENST00000469479 USP10Q14694 798 aaKnown RBP6.25□□□□□ -1.41
VPS8-219ENST00000469479 SULT6B1Q6IMI4 303 aa6.25□□□□□ -1.41
VPS8-219ENST00000469479 ZNF790Q6PG37 636 aa6.25□□□□□ -1.41
VPS8-219ENST00000469479 KRT26Q7Z3Y9 468 aa6.25□□□□□ -1.41
VPS8-219ENST00000469479 C1orf210Q8IVY1 113 aa6.25□□□□□ -1.41
VPS8-219ENST00000469479 ZNF654Q8IZM8 581 aa6.25□□□□□ -1.41
VPS8-219ENST00000469479 FUKQ8N0W3 1084 aa6.25□□□□□ -1.41
VPS8-219ENST00000469479 KREMEN2Q8NCW0 462 aa6.25□□□□□ -1.41
VPS8-219ENST00000469479 NEU4Q8WWR8 484 aaPredicted RBP6.25□□□□□ -1.41
VPS8-219ENST00000469479 DPF2Q92785 391 aa6.25□□□□□ -1.41
VPS8-219ENST00000469479 DCPSQ96C86 337 aaKnown RBP6.25□□□□□ -1.41
VPS8-219ENST00000469479 FAM89AQ96GI7 184 aa6.25□□□□□ -1.41
VPS8-219ENST00000469479 CRAMP1Q96RY5 1269 aa6.25□□□□□ -1.41
VPS8-219ENST00000469479 BACH2Q9BYV9 841 aa6.25□□□□□ -1.41
VPS8-219ENST00000469479 RBPJLQ9UBG7 517 aa6.25□□□□□ -1.41
VPS8-219ENST00000469479 IBTKQ9P2D0 1353 aaPredicted RBP6.25□□□□□ -1.41
VPS8-219ENST00000469479 UBR2Q8IWV8 1755 aa6.24□□□□□ -1.41
VPS8-219ENST00000469479 RPS12P25398 132 aaKnown RBP6.24□□□□□ -1.41
VPS8-219ENST00000469479 ATXN1P54253 815 aaKnown RBP6.24□□□□□ -1.41
VPS8-219ENST00000469479 CXCL9Q07325 125 aa6.24□□□□□ -1.41
VPS8-219ENST00000469479 GPR155Q7Z3F1 870 aa6.24□□□□□ -1.41
VPS8-219ENST00000469479 POLNQ7Z5Q5 900 aa6.24□□□□□ -1.41
VPS8-219ENST00000469479 RASGRP4Q8TDF6 673 aa6.24□□□□□ -1.41
VPS8-219ENST00000469479 BTN2A2Q8WVV5 523 aa6.24□□□□□ -1.41
VPS8-219ENST00000469479 RBM17Q96I25 401 aaKnown RBP6.24□□□□□ -1.41
VPS8-219ENST00000469479 ZNF496Q96IT1 587 aaPredicted RBP6.24□□□□□ -1.41
VPS8-219ENST00000469479 NIP7Q9Y221 180 aaKnown RBP eCLIP6.24□□□□□ -1.41
VPS8-219ENST00000469479 CKMP06732 381 aa6.23□□□□□ -1.41
VPS8-219ENST00000469479 TNNT2P45379 298 aaPredicted RBP6.23□□□□□ -1.41
VPS8-219ENST00000469479 DGCR2P98153 550 aa6.23□□□□□ -1.41
VPS8-219ENST00000469479 SREBF2Q12772 1141 aa6.23□□□□□ -1.41
VPS8-219ENST00000469479 OLFM4Q6UX06 510 aa6.23□□□□□ -1.41
VPS8-219ENST00000469479 Q6ZSN1 163 aa6.23□□□□□ -1.41
VPS8-219ENST00000469479 PPIL6Q8IXY8 311 aa6.23□□□□□ -1.41
VPS8-219ENST00000469479 ZG16BQ96DA0 208 aa6.23□□□□□ -1.41
VPS8-219ENST00000469479 SHDQ96IW2 340 aa6.23□□□□□ -1.41
VPS8-219ENST00000469479 PLEKHG4BQ96PX9 1271 aa6.23□□□□□ -1.41
VPS8-219ENST00000469479 RTFDC1Q9BY42 306 aaPredicted RBP6.23□□□□□ -1.41
VPS8-219ENST00000469479 SLC6A20Q9NP91 592 aa6.23□□□□□ -1.41
VPS8-219ENST00000469479 ARHGAP20Q9P2F6 1191 aa6.23□□□□□ -1.41
VPS8-219ENST00000469479 CNOT7Q9UIV1 285 aaKnown RBP6.23□□□□□ -1.41
VPS8-219ENST00000469479 ZFP69BQ9UJL9 534 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms