RNA–Protein interactions for RNA: ENST00000469334.5

SMARCE1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,128 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-207ENST00000469334 ARMCX3Q9UH62 379 aaPredicted RBP9.68□□□□□ -0.86
SMARCE1-207ENST00000469334 PCYOX1Q9UHG3 505 aa9.68□□□□□ -0.86
SMARCE1-207ENST00000469334 DBR1Q9UK59 544 aaKnown RBP9.68□□□□□ -0.86
SMARCE1-207ENST00000469334 NENFQ9UMX5 172 aa9.68□□□□□ -0.86
SMARCE1-207ENST00000469334 CHMP2BQ9UQN3 213 aa9.68□□□□□ -0.86
SMARCE1-207ENST00000469334 SSX2IPQ9Y2D8 614 aa9.68□□□□□ -0.86
SMARCE1-207ENST00000469334 UBR1Q8IWV7 1749 aa9.67□□□□□ -0.86
SMARCE1-207ENST00000469334 PRDM1O75626 825 aa9.67□□□□□ -0.86
SMARCE1-207ENST00000469334 GFPT2O94808 682 aa9.67□□□□□ -0.86
SMARCE1-207ENST00000469334 GGPS1O95749 300 aa9.67□□□□□ -0.86
SMARCE1-207ENST00000469334 UBTFL6P0CB48 400 aaPredicted RBP9.67□□□□□ -0.86
SMARCE1-207ENST00000469334 BRAFP15056 766 aa9.67□□□□□ -0.86
SMARCE1-207ENST00000469334 MCAMP43121 646 aa9.67□□□□□ -0.86
SMARCE1-207ENST00000469334 SLCO1A2P46721 670 aa9.67□□□□□ -0.86
SMARCE1-207ENST00000469334 CLCN2P51788 898 aa9.67□□□□□ -0.86
SMARCE1-207ENST00000469334 HLFQ16534 295 aa9.67□□□□□ -0.86
SMARCE1-207ENST00000469334 ZNF568Q3ZCX4 644 aa9.67□□□□□ -0.86
SMARCE1-207ENST00000469334 ZCWPW2Q504Y3 356 aa9.67□□□□□ -0.86
SMARCE1-207ENST00000469334 DNAJC14Q6Y2X3 702 aaPredicted RBP9.67□□□□□ -0.86
SMARCE1-207ENST00000469334 CATIPQ7Z7H3 387 aa9.67□□□□□ -0.86
SMARCE1-207ENST00000469334 PHLDB2Q86SQ0 1253 aa9.67□□□□□ -0.86
SMARCE1-207ENST00000469334 VPS36Q86VN1 386 aa9.67□□□□□ -0.86
SMARCE1-207ENST00000469334 PROCA1Q8NCQ7 364 aaPredicted RBP9.67□□□□□ -0.86
SMARCE1-207ENST00000469334 GDAP1Q8TB36 358 aa9.67□□□□□ -0.86
SMARCE1-207ENST00000469334 TUBGCP5Q96RT8 1024 aa9.67□□□□□ -0.86
SMARCE1-207ENST00000469334 TANGO6Q9C0B7 1094 aa9.67□□□□□ -0.86
SMARCE1-207ENST00000469334 BRD8Q9H0E9 1235 aa9.67□□□□□ -0.86
SMARCE1-207ENST00000469334 V9GY48 417 aaPredicted RBP9.67□□□□□ -0.86
SMARCE1-207ENST00000469334 LAMB1P07942 1786 aa9.67□□□□□ -0.86
SMARCE1-207ENST00000469334 NCANO14594 1321 aa9.67□□□□□ -0.86
SMARCE1-207ENST00000469334 PFASO15067 1338 aa9.67□□□□□ -0.86
SMARCE1-207ENST00000469334 FLT1P17948 1338 aa9.67□□□□□ -0.86
SMARCE1-207ENST00000469334 CNTNAP5Q8WYK1 1306 aa9.67□□□□□ -0.86
SMARCE1-207ENST00000469334 ATP5J2-PTCD1G3V325 749 aa9.67□□□□□ -0.86
SMARCE1-207ENST00000469334 NKRFO15226 690 aaKnown RBP eCLIP9.67□□□□□ -0.86
SMARCE1-207ENST00000469334 PTCD1O75127 700 aaKnown RBP9.67□□□□□ -0.86
SMARCE1-207ENST00000469334 RAPGEF3O95398 923 aa9.67□□□□□ -0.86
SMARCE1-207ENST00000469334 H2AFZP0C0S5 128 aa9.67□□□□□ -0.86
SMARCE1-207ENST00000469334 TROVE2P10155 538 aaKnown RBP eCLIP9.67□□□□□ -0.86
SMARCE1-207ENST00000469334 FCER1AP12319 257 aa9.67□□□□□ -0.86
SMARCE1-207ENST00000469334 ALAS1P13196 640 aa9.67□□□□□ -0.86
SMARCE1-207ENST00000469334 PLCG1P19174 1290 aa9.67□□□□□ -0.86
SMARCE1-207ENST00000469334 SMARCA1P28370 1054 aa9.67□□□□□ -0.86
SMARCE1-207ENST00000469334 PRKCIP41743 596 aa9.67□□□□□ -0.86
SMARCE1-207ENST00000469334 PTGIRP43119 386 aa9.67□□□□□ -0.86
SMARCE1-207ENST00000469334 ACADVLP49748 655 aa9.67□□□□□ -0.86
SMARCE1-207ENST00000469334 OXCT1P55809 520 aa9.67□□□□□ -0.86
SMARCE1-207ENST00000469334 MARSP56192 900 aaKnown RBP9.67□□□□□ -0.86
SMARCE1-207ENST00000469334 TMEM62Q0P6H9 643 aa9.67□□□□□ -0.86
SMARCE1-207ENST00000469334 ZC2HC1CQ53FD0 456 aaPredicted RBP9.67□□□□□ -0.86
SMARCE1-207ENST00000469334 SLC44A4Q53GD3 710 aa9.67□□□□□ -0.86
SMARCE1-207ENST00000469334 CC2D2BQ6DHV5 1058 aa9.67□□□□□ -0.86
SMARCE1-207ENST00000469334 TMTC3Q6ZXV5 915 aa9.67□□□□□ -0.86
SMARCE1-207ENST00000469334 H2AFVQ71UI9 128 aa9.67□□□□□ -0.86
SMARCE1-207ENST00000469334 ARMCX6Q7L4S7 300 aa9.67□□□□□ -0.86
SMARCE1-207ENST00000469334 CCDC65Q8IXS2 484 aa9.67□□□□□ -0.86
SMARCE1-207ENST00000469334 C7orf43Q8WVR3 580 aa9.67□□□□□ -0.86
SMARCE1-207ENST00000469334 ART4Q93070 314 aa9.67□□□□□ -0.86
SMARCE1-207ENST00000469334 EEF2KMTQ96G04 330 aa9.67□□□□□ -0.86
SMARCE1-207ENST00000469334 CEP63Q96MT8 703 aa9.67□□□□□ -0.86
SMARCE1-207ENST00000469334 OXCT2Q9BYC2 517 aaPredicted RBP9.67□□□□□ -0.86
SMARCE1-207ENST00000469334 PRDM16Q9HAZ2 1276 aa9.67□□□□□ -0.86
SMARCE1-207ENST00000469334 TRPV5Q9NQA5 729 aa9.67□□□□□ -0.86
SMARCE1-207ENST00000469334 KRT82Q9NSB4 513 aa9.67□□□□□ -0.86
SMARCE1-207ENST00000469334 NAGPAQ9UK23 515 aa9.67□□□□□ -0.86
SMARCE1-207ENST00000469334 SNX24Q9Y343 169 aa9.67□□□□□ -0.86
SMARCE1-207ENST00000469334 COL4A3BPQ9Y5P4 624 aa9.67□□□□□ -0.86
SMARCE1-207ENST00000469334 TACC3Q9Y6A5 838 aa9.67□□□□□ -0.86
SMARCE1-207ENST00000469334 DUOX1Q9NRD9 1551 aa9.67□□□□□ -0.86
SMARCE1-207ENST00000469334 SYNGAP1Q96PV0 1343 aa9.66□□□□□ -0.86
SMARCE1-207ENST00000469334 F8W8V4 182 aa9.66□□□□□ -0.86
SMARCE1-207ENST00000469334 C2CD2LO14523 706 aa9.66□□□□□ -0.86
SMARCE1-207ENST00000469334 TBX10O75333 385 aa9.66□□□□□ -0.86
SMARCE1-207ENST00000469334 KRT36O76013 467 aa9.66□□□□□ -0.86
SMARCE1-207ENST00000469334 SNRPA1P09661 255 aaKnown RBP9.66□□□□□ -0.86
SMARCE1-207ENST00000469334 SCG2P13521 617 aa9.66□□□□□ -0.86
SMARCE1-207ENST00000469334 MUTP22033 750 aa9.66□□□□□ -0.86
SMARCE1-207ENST00000469334 FGFR4P22455 802 aa9.66□□□□□ -0.86
SMARCE1-207ENST00000469334 CRABP2P29373 138 aa9.66□□□□□ -0.86
SMARCE1-207ENST00000469334 SERPINB3P29508 390 aa9.66□□□□□ -0.86
SMARCE1-207ENST00000469334 CCNFP41002 786 aa9.66□□□□□ -0.86
SMARCE1-207ENST00000469334 SLC18A1P54219 525 aa9.66□□□□□ -0.86
SMARCE1-207ENST00000469334 ADARP55265 1226 aaKnown RBP9.66□□□□□ -0.86
SMARCE1-207ENST00000469334 MAP3K10Q02779 954 aa9.66□□□□□ -0.86
SMARCE1-207ENST00000469334 HNRNPDQ14103 355 aaKnown RBP9.66□□□□□ -0.86
SMARCE1-207ENST00000469334 SPIDRQ14159 915 aa9.66□□□□□ -0.86
SMARCE1-207ENST00000469334 GRM2Q14416 872 aa9.66□□□□□ -0.86
SMARCE1-207ENST00000469334 RRP1BQ14684 758 aaKnown RBP9.66□□□□□ -0.86
SMARCE1-207ENST00000469334 ACSBG2Q5FVE4 666 aa9.66□□□□□ -0.86
SMARCE1-207ENST00000469334 CFAP157Q5JU67 520 aa9.66□□□□□ -0.86
SMARCE1-207ENST00000469334 ALKBH5Q6P6C2 394 aaKnown RBP9.66□□□□□ -0.86
SMARCE1-207ENST00000469334 ZNF449Q6P9G9 518 aa9.66□□□□□ -0.86
SMARCE1-207ENST00000469334 B3GNT6Q6ZMB0 384 aa9.66□□□□□ -0.86
SMARCE1-207ENST00000469334 RINLQ6ZS11 566 aa9.66□□□□□ -0.86
SMARCE1-207ENST00000469334 CABP7Q86V35 215 aa9.66□□□□□ -0.86
SMARCE1-207ENST00000469334 PASD1Q8IV76 773 aa9.66□□□□□ -0.86
SMARCE1-207ENST00000469334 MAP7D3Q8IWC1 876 aa9.66□□□□□ -0.86
SMARCE1-207ENST00000469334 RIBC1Q8N443 379 aaPredicted RBP9.66□□□□□ -0.86
SMARCE1-207ENST00000469334 FAM133AQ8N9E0 248 aa9.66□□□□□ -0.86
SMARCE1-207ENST00000469334 RBM46Q8TBY0 533 aaKnown RBP9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms