RNA–Protein interactions for RNA: ENST00000468653.5

SMC4-209, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,756 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-209ENST00000468653 TRIM49CP0CI26 452 aa20.69■□□□□ 0.9
SMC4-209ENST00000468653 CLCN3P51790 818 aa20.69■□□□□ 0.9
SMC4-209ENST00000468653 TFDP1Q14186 410 aa20.69■□□□□ 0.9
SMC4-209ENST00000468653 ZBTB8OSQ8IWT0 167 aa20.69■□□□□ 0.9
SMC4-209ENST00000468653 RNF149Q8NC42 400 aa20.69■□□□□ 0.9
SMC4-209ENST00000468653 ZSWIM2Q8NEG5 633 aa20.69■□□□□ 0.9
SMC4-209ENST00000468653 ZBTB10Q96DT7 871 aa20.69■□□□□ 0.9
SMC4-209ENST00000468653 CEP72Q9P209 647 aa20.69■□□□□ 0.9
SMC4-209ENST00000468653 ASAP2O43150 1006 aa20.68■□□□□ 0.9
SMC4-209ENST00000468653 IGHA2P01877 340 aa20.68■□□□□ 0.9
SMC4-209ENST00000468653 FMO5P49326 533 aa20.68■□□□□ 0.9
SMC4-209ENST00000468653 PPFIA1Q13136 1202 aa20.68■□□□□ 0.9
SMC4-209ENST00000468653 KIF22Q14807 665 aa20.68■□□□□ 0.9
SMC4-209ENST00000468653 MTF1Q14872 753 aa20.68■□□□□ 0.9
SMC4-209ENST00000468653 SNRNP35Q16560 246 aaKnown RBP20.68■□□□□ 0.9
SMC4-209ENST00000468653 MFSD14CQ5VZR4 134 aa20.68■□□□□ 0.9
SMC4-209ENST00000468653 LENG1Q96BZ8 264 aaPredicted RBP20.68■□□□□ 0.9
SMC4-209ENST00000468653 C2orf40Q9H1Z8 148 aa20.68■□□□□ 0.9
SMC4-209ENST00000468653 GABRQQ9UN88 632 aa20.68■□□□□ 0.9
SMC4-209ENST00000468653 ZSCAN12O43309 604 aa20.67■□□□□ 0.9
SMC4-209ENST00000468653 PIGRP01833 764 aa20.67■□□□□ 0.9
SMC4-209ENST00000468653 FLT3LGP49771 235 aa20.67■□□□□ 0.9
SMC4-209ENST00000468653 SLFN12LQ6IEE8 588 aa20.67■□□□□ 0.9
SMC4-209ENST00000468653 RAD9BQ6WBX8 426 aa20.67■□□□□ 0.9
SMC4-209ENST00000468653 TOGARAM2Q6ZUX3 1019 aa20.67■□□□□ 0.9
SMC4-209ENST00000468653 RRAGAQ7L523 313 aa20.67■□□□□ 0.9
SMC4-209ENST00000468653 CBWD2Q8IUF1 395 aa20.67■□□□□ 0.9
SMC4-209ENST00000468653 GCNT4Q9P109 453 aa20.67■□□□□ 0.9
SMC4-209ENST00000468653 USP20Q9Y2K6 914 aa20.67■□□□□ 0.9
SMC4-209ENST00000468653 Q9Y3F1 56 aa20.67■□□□□ 0.9
SMC4-209ENST00000468653 MGAMO43451 1857 aa20.67■□□□□ 0.9
SMC4-209ENST00000468653 TULP1O00294 542 aaPredicted RBP20.67■□□□□ 0.9
SMC4-209ENST00000468653 NOL4O94818 638 aa20.67■□□□□ 0.9
SMC4-209ENST00000468653 SLC9A1P19634 815 aa20.67■□□□□ 0.9
SMC4-209ENST00000468653 PON1P27169 355 aa20.67■□□□□ 0.9
SMC4-209ENST00000468653 TMOD1P28289 359 aa20.67■□□□□ 0.9
SMC4-209ENST00000468653 CPT1AP50416 773 aa20.67■□□□□ 0.9
SMC4-209ENST00000468653 POLR2FP61218 127 aaKnown RBP20.67■□□□□ 0.9
SMC4-209ENST00000468653 GRIK4Q16099 956 aa20.67■□□□□ 0.9
SMC4-209ENST00000468653 MEA1Q16626 185 aa20.67■□□□□ 0.9
SMC4-209ENST00000468653 CDCA2Q69YH5 1023 aaPredicted RBP20.67■□□□□ 0.9
SMC4-209ENST00000468653 GPD1LQ8N335 351 aa20.67■□□□□ 0.9
SMC4-209ENST00000468653 PPP1R13BQ96KQ4 1090 aa20.67■□□□□ 0.9
SMC4-209ENST00000468653 NLRP4Q96MN2 994 aa20.67■□□□□ 0.9
SMC4-209ENST00000468653 TARS2Q9BW92 718 aaKnown RBP20.67■□□□□ 0.9
SMC4-209ENST00000468653 NLRC4Q9NPP4 1024 aa20.67■□□□□ 0.9
SMC4-209ENST00000468653 PLCB1Q9NQ66 1216 aa20.67■□□□□ 0.9
SMC4-209ENST00000468653 ADRB2P07550 413 aa20.66■□□□□ 0.9
SMC4-209ENST00000468653 AKR1A1P14550 325 aa20.66■□□□□ 0.9
SMC4-209ENST00000468653 MATR3P43243 847 aaKnown RBP eCLIP20.66■□□□□ 0.97e-8■■□□□ 11.8
SMC4-209ENST00000468653 CHMP4BP1P59074 171 aa20.66■□□□□ 0.9
SMC4-209ENST00000468653 DLG4P78352 724 aa20.66■□□□□ 0.9
SMC4-209ENST00000468653 MYL7Q01449 175 aa20.66■□□□□ 0.9
SMC4-209ENST00000468653 SP3Q02447 781 aa20.66■□□□□ 0.9
SMC4-209ENST00000468653 WDR59Q6PJI9 974 aa20.66■□□□□ 0.9
SMC4-209ENST00000468653 MTHFD1LQ6UB35 978 aa20.66■□□□□ 0.9
SMC4-209ENST00000468653 BAP1Q92560 729 aa20.66■□□□□ 0.9
SMC4-209ENST00000468653 C16orf45Q96MC5 204 aaPredicted RBP20.66■□□□□ 0.9
SMC4-209ENST00000468653 CHP1Q99653 195 aa20.66■□□□□ 0.9
SMC4-209ENST00000468653 KIAA1586Q9HCI6 787 aa20.66■□□□□ 0.9
SMC4-209ENST00000468653 PPP2R2CQ9Y2T4 447 aa20.66■□□□□ 0.9
SMC4-209ENST00000468653 LRRC53A6NM62 1247 aa20.65■□□□□ 0.9
SMC4-209ENST00000468653 KIAA0391O15091 583 aaKnown RBP20.65■□□□□ 0.9
SMC4-209ENST00000468653 GJB1P08034 283 aa20.65■□□□□ 0.9
SMC4-209ENST00000468653 ACTN1P12814 892 aa20.65■□□□□ 0.9
SMC4-209ENST00000468653 APBA1Q02410 837 aa20.65■□□□□ 0.9
SMC4-209ENST00000468653 MAPK6Q16659 721 aa20.65■□□□□ 0.9
SMC4-209ENST00000468653 CBWD6Q4V339 395 aa20.65■□□□□ 0.9
SMC4-209ENST00000468653 CBWD3Q5JTY5 395 aa20.65■□□□□ 0.9
SMC4-209ENST00000468653 CBWD5Q5RIA9 395 aa20.65■□□□□ 0.9
SMC4-209ENST00000468653 PDXDC1Q6P996 788 aa20.65■□□□□ 0.9
SMC4-209ENST00000468653 FBXL18Q96ME1 805 aa20.65■□□□□ 0.9
SMC4-209ENST00000468653 FAM213AQ9BRX8 229 aa20.65■□□□□ 0.9
SMC4-209ENST00000468653 DESI2Q9BSY9 194 aa20.65■□□□□ 0.9
SMC4-209ENST00000468653 NUCKS1Q9H1E3 243 aaKnown RBP20.65■□□□□ 0.9
SMC4-209ENST00000468653 GANQ9H2C0 597 aa20.65■□□□□ 0.9
SMC4-209ENST00000468653 PLAGL2Q9UPG8 496 aa20.65■□□□□ 0.9
SMC4-209ENST00000468653 STYXL1Q9Y6J8 313 aa20.65■□□□□ 0.9
SMC4-209ENST00000468653 N4BP1O75113 896 aaKnown RBP20.64■□□□□ 0.9
SMC4-209ENST00000468653 PRKCBP05771 671 aa20.64■□□□□ 0.9
SMC4-209ENST00000468653 PRKCZQ05513 592 aa20.64■□□□□ 0.9
SMC4-209ENST00000468653 HSP90AA2PQ14568 343 aaPredicted RBP20.64■□□□□ 0.9
SMC4-209ENST00000468653 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.64■□□□□ 0.9
SMC4-209ENST00000468653 USP37Q86T82 979 aa20.64■□□□□ 0.9
SMC4-209ENST00000468653 ZNF784Q8NCA9 323 aaPredicted RBP20.64■□□□□ 0.9
SMC4-209ENST00000468653 TRIB2Q92519 343 aa20.64■□□□□ 0.9
SMC4-209ENST00000468653 ZNF668Q96K58 619 aaPredicted RBP20.64■□□□□ 0.9
SMC4-209ENST00000468653 MRPL4Q9BYD3 311 aaKnown RBP20.64■□□□□ 0.9
SMC4-209ENST00000468653 CCDC113Q9H0I3 377 aa20.64■□□□□ 0.9
SMC4-209ENST00000468653 ANKFY1Q9P2R3 1169 aa20.64■□□□□ 0.9
SMC4-209ENST00000468653 AGO2Q9UKV8 859 aaKnown RBP20.64■□□□□ 0.9
SMC4-209ENST00000468653 AKT3Q9Y243 479 aa20.64■□□□□ 0.9
SMC4-209ENST00000468653 RRN3P2A6NIE6 340 aa20.64■□□□□ 0.89
SMC4-209ENST00000468653 ZNF233A6NK53 670 aa20.64■□□□□ 0.89
SMC4-209ENST00000468653 EXTL3O43909 919 aa20.64■□□□□ 0.89
SMC4-209ENST00000468653 OFD1O75665 1012 aa20.64■□□□□ 0.89
SMC4-209ENST00000468653 F2P00734 622 aa20.64■□□□□ 0.89
SMC4-209ENST00000468653 MYL3P08590 195 aa20.64■□□□□ 0.89
SMC4-209ENST00000468653 CCDC175P0C221 793 aa20.64■□□□□ 0.89
SMC4-209ENST00000468653 YY1P25490 414 aa20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms