RNA–Protein interactions for RNA: ENST00000468040.2

SNIP1-202, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 5

Gene SNIP1, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-202ENST00000468040 STK4Q13043 487 aa16.72■□□□□ 0.27
SNIP1-202ENST00000468040 PPIGQ13427 754 aaKnown RBP eCLIP16.72■□□□□ 0.27
SNIP1-202ENST00000468040 PRPF4BQ13523 1007 aaKnown RBP16.72■□□□□ 0.27
SNIP1-202ENST00000468040 GPNMBQ14956 572 aa16.72■□□□□ 0.27
SNIP1-202ENST00000468040 PLEKHG4Q58EX7 1191 aa16.72■□□□□ 0.27
SNIP1-202ENST00000468040 ZNF658Q5TYW1 1059 aaPredicted RBP16.72■□□□□ 0.27
SNIP1-202ENST00000468040 RBM43Q6ZSC3 357 aaKnown RBP16.72■□□□□ 0.27
SNIP1-202ENST00000468040 EPM2AIP1Q7L775 607 aaPredicted RBP16.72■□□□□ 0.27
SNIP1-202ENST00000468040 RPUSD2Q8IZ73 545 aaKnown RBP16.72■□□□□ 0.27
SNIP1-202ENST00000468040 SEPT8Q92599 483 aa16.72■□□□□ 0.27
SNIP1-202ENST00000468040 BADQ92934 168 aa16.72■□□□□ 0.27
SNIP1-202ENST00000468040 STRA6Q9BX79 667 aa16.72■□□□□ 0.27
SNIP1-202ENST00000468040 MRPL4Q9BYD3 311 aaKnown RBP16.72■□□□□ 0.27
SNIP1-202ENST00000468040 ERVK-5Q9HDB9 667 aa16.72■□□□□ 0.27
SNIP1-202ENST00000468040 SLC39A2Q9NP94 309 aa16.72■□□□□ 0.27
SNIP1-202ENST00000468040 AGPAT5Q9NUQ2 364 aa16.72■□□□□ 0.27
SNIP1-202ENST00000468040 PADI3Q9ULW8 664 aa16.72■□□□□ 0.27
SNIP1-202ENST00000468040 TBX20Q9UMR3 447 aa16.72■□□□□ 0.27
SNIP1-202ENST00000468040 ST3GAL5Q9UNP4 418 aa16.72■□□□□ 0.27
SNIP1-202ENST00000468040 EXOC7Q9UPT5 735 aa16.72■□□□□ 0.27
SNIP1-202ENST00000468040 LTBP2Q14767 1821 aa16.72■□□□□ 0.27
SNIP1-202ENST00000468040 CNTNAP2Q9UHC6 1331 aa16.71■□□□□ 0.27
SNIP1-202ENST00000468040 TSPAN1O60635 241 aa16.71■□□□□ 0.27
SNIP1-202ENST00000468040 FPGSQ05932 587 aa16.71■□□□□ 0.27
SNIP1-202ENST00000468040 ZC2HC1CQ53FD0 456 aaPredicted RBP16.71■□□□□ 0.27
SNIP1-202ENST00000468040 L1TD1Q5T7N2 865 aaKnown RBP16.71■□□□□ 0.27
SNIP1-202ENST00000468040 MAP4K3Q8IVH8 894 aa16.71■□□□□ 0.27
SNIP1-202ENST00000468040 KIAA0895Q8NCT3 520 aa16.71■□□□□ 0.27
SNIP1-202ENST00000468040 ACCSQ96QU6 501 aa16.71■□□□□ 0.27
SNIP1-202ENST00000468040 FTHL17Q9BXU8 183 aa16.71■□□□□ 0.27
SNIP1-202ENST00000468040 FGFBP2Q9BYJ0 223 aa16.71■□□□□ 0.27
SNIP1-202ENST00000468040 TMEM206Q9H813 350 aa16.71■□□□□ 0.27
SNIP1-202ENST00000468040 LETM1O95202 739 aaPredicted RBP16.7■□□□□ 0.26
SNIP1-202ENST00000468040 FGFR4P22455 802 aa16.7■□□□□ 0.26
SNIP1-202ENST00000468040 PPP1R2P41236 205 aa16.7■□□□□ 0.26
SNIP1-202ENST00000468040 MORC3Q14149 939 aa16.7■□□□□ 0.26
SNIP1-202ENST00000468040 AMHR2Q16671 573 aa16.7■□□□□ 0.26
SNIP1-202ENST00000468040 BMT2Q1RMZ1 405 aa16.7■□□□□ 0.26
SNIP1-202ENST00000468040 TMEM132AQ24JP5 1023 aa16.7■□□□□ 0.26
SNIP1-202ENST00000468040 CNKSR3Q6P9H4 555 aa16.7■□□□□ 0.26
SNIP1-202ENST00000468040 ZPBP2Q6X784 338 aa16.7■□□□□ 0.26
SNIP1-202ENST00000468040 TAS1R3Q7RTX0 852 aa16.7■□□□□ 0.26
SNIP1-202ENST00000468040 DEFB128Q7Z7B8 93 aa16.7■□□□□ 0.26
SNIP1-202ENST00000468040 MYOCDQ8IZQ8 938 aa16.7■□□□□ 0.26
SNIP1-202ENST00000468040 GLIS3Q8NEA6 775 aa16.7■□□□□ 0.26
SNIP1-202ENST00000468040 ZNF507Q8TCN5 953 aa16.7■□□□□ 0.26
SNIP1-202ENST00000468040 SCFD1Q8WVM8 642 aa16.7■□□□□ 0.26
SNIP1-202ENST00000468040 CCDC51Q96ER9 411 aa16.7■□□□□ 0.26
SNIP1-202ENST00000468040 BICD1Q96G01 975 aa16.7■□□□□ 0.26
SNIP1-202ENST00000468040 OSBPL7Q9BZF2 842 aa16.7■□□□□ 0.26
SNIP1-202ENST00000468040 IL23AQ9NPF7 189 aa16.7■□□□□ 0.26
SNIP1-202ENST00000468040 CHST12Q9NRB3 414 aa16.7■□□□□ 0.26
SNIP1-202ENST00000468040 GDAQ9Y2T3 454 aa16.7■□□□□ 0.26
SNIP1-202ENST00000468040 BIN1O00499 593 aa16.69■□□□□ 0.26
SNIP1-202ENST00000468040 HNRNPDLO14979 420 aaKnown RBP16.69■□□□□ 0.26
SNIP1-202ENST00000468040 B4GALT5O43286 388 aa16.69■□□□□ 0.26
SNIP1-202ENST00000468040 PRPF6O94906 941 aaKnown RBP16.69■□□□□ 0.26
SNIP1-202ENST00000468040 PIGRP01833 764 aa16.69■□□□□ 0.26
SNIP1-202ENST00000468040 ZSCAN20P17040 1043 aaPredicted RBP16.69■□□□□ 0.26
SNIP1-202ENST00000468040 ARF4P18085 180 aaPredicted RBP16.69■□□□□ 0.26
SNIP1-202ENST00000468040 STIM1Q13586 685 aa16.69■□□□□ 0.26
SNIP1-202ENST00000468040 COBLL1Q53SF7 1204 aa16.69■□□□□ 0.26
SNIP1-202ENST00000468040 NOTUMQ6P988 496 aa16.69■□□□□ 0.26
SNIP1-202ENST00000468040 SYCP3Q8IZU3 236 aa16.69■□□□□ 0.26
SNIP1-202ENST00000468040 GUF1Q8N442 669 aaKnown RBP16.69■□□□□ 0.26
SNIP1-202ENST00000468040 DBF4BQ8NFT6 615 aa16.69■□□□□ 0.26
SNIP1-202ENST00000468040 PIN4Q9Y237 131 aaKnown RBP16.69■□□□□ 0.26
SNIP1-202ENST00000468040 SCN5AQ14524 2016 aa16.69■□□□□ 0.26
SNIP1-202ENST00000468040 A0A1B0GUA9 196 aa16.68■□□□□ 0.26
SNIP1-202ENST00000468040 N4BP3O15049 544 aa16.68■□□□□ 0.26
SNIP1-202ENST00000468040 ACTN1P12814 892 aa16.68■□□□□ 0.26
SNIP1-202ENST00000468040 LIG4P49917 911 aa16.68■□□□□ 0.26
SNIP1-202ENST00000468040 KNOP1Q1ED39 458 aaKnown RBP16.68■□□□□ 0.26
SNIP1-202ENST00000468040 ATF7IP2Q5U623 682 aa16.68■□□□□ 0.26
SNIP1-202ENST00000468040 ISM2Q6H9L7 571 aa16.68■□□□□ 0.26
SNIP1-202ENST00000468040 SASS6Q6UVJ0 657 aa16.68■□□□□ 0.26
SNIP1-202ENST00000468040 APBB1IPQ7Z5R6 666 aaPredicted RBP16.68■□□□□ 0.26
SNIP1-202ENST00000468040 TARS2Q9BW92 718 aaKnown RBP16.68■□□□□ 0.26
SNIP1-202ENST00000468040 TMX1Q9H3N1 280 aa16.68■□□□□ 0.26
SNIP1-202ENST00000468040 EFCAB14O75071 495 aa16.67■□□□□ 0.26
SNIP1-202ENST00000468040 TOM1L1O75674 476 aa16.67■□□□□ 0.26
SNIP1-202ENST00000468040 HOXA11P31270 313 aaPredicted RBP16.67■□□□□ 0.26
SNIP1-202ENST00000468040 SNRPFP62306 86 aaKnown RBP16.67■□□□□ 0.26
SNIP1-202ENST00000468040 MLLT1Q03111 559 aaPredicted RBP16.67■□□□□ 0.26
SNIP1-202ENST00000468040 KCNA1Q09470 495 aa16.67■□□□□ 0.26
SNIP1-202ENST00000468040 IKBKEQ14164 716 aa16.67■□□□□ 0.26
SNIP1-202ENST00000468040 TWF2Q6IBS0 349 aaKnown RBP16.67■□□□□ 0.26
SNIP1-202ENST00000468040 PSRC1Q6PGN9 363 aaPredicted RBP16.67■□□□□ 0.26
SNIP1-202ENST00000468040 HS2ST1Q7LGA3 356 aa16.67■□□□□ 0.26
SNIP1-202ENST00000468040 NELFCDQ8IXH7 590 aa16.67■□□□□ 0.26
SNIP1-202ENST00000468040 SMYD4Q8IYR2 804 aaPredicted RBP16.67■□□□□ 0.26
SNIP1-202ENST00000468040 MLKLQ8NB16 471 aa16.67■□□□□ 0.26
SNIP1-202ENST00000468040 CPB2Q96IY4 423 aa16.67■□□□□ 0.26
SNIP1-202ENST00000468040 ACO2Q99798 780 aaKnown RBP16.67■□□□□ 0.26
SNIP1-202ENST00000468040 ADPGKQ9BRR6 497 aa16.67■□□□□ 0.26
SNIP1-202ENST00000468040 GBP3Q9H0R5 595 aa16.67■□□□□ 0.26
SNIP1-202ENST00000468040 MAPK8IP1Q9UQF2 711 aa16.67■□□□□ 0.26
SNIP1-202ENST00000468040 TNFSF13BQ9Y275 285 aa16.67■□□□□ 0.26
SNIP1-202ENST00000468040 ABHD14A-ACY1A0A1B0GW23 586 aa16.66■□□□□ 0.26
SNIP1-202ENST00000468040 TTLL13PA6NNM8 815 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms