RNA–Protein interactions for RNA: ENST00000467539.1

CGREF1-208, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

TSL 4

Gene CGREF1, Length 548 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-208ENST00000467539 GTF2F1P35269 517 aaKnown RBP eCLIP20.11■□□□□ 0.81
CGREF1-208ENST00000467539 BCAR1P56945 870 aa20.11■□□□□ 0.81
CGREF1-208ENST00000467539 ARL6IP4Q66PJ3 421 aaKnown RBP20.11■□□□□ 0.81
CGREF1-208ENST00000467539 SLC39A11Q8N1S5 342 aa20.11■□□□□ 0.81
CGREF1-208ENST00000467539 KCTD17Q8N5Z5 321 aa20.11■□□□□ 0.81
CGREF1-208ENST00000467539 SMG8Q8ND04 991 aaKnown RBP20.11■□□□□ 0.81
CGREF1-208ENST00000467539 BHMT2Q9H2M3 363 aa20.11■□□□□ 0.81
CGREF1-208ENST00000467539 FZD8Q9H461 694 aa20.11■□□□□ 0.81
CGREF1-208ENST00000467539 DDX19AQ9NUU7 478 aaKnown RBP20.11■□□□□ 0.81
CGREF1-208ENST00000467539 TBC1D13Q9NVG8 400 aa20.11■□□□□ 0.81
CGREF1-208ENST00000467539 KANSL3Q9P2N6 904 aa20.11■□□□□ 0.81
CGREF1-208ENST00000467539 NCOR1O75376 2440 aa20.11■□□□□ 0.81
CGREF1-208ENST00000467539 CNTNAP2Q9UHC6 1331 aa20.1■□□□□ 0.81
CGREF1-208ENST00000467539 A0A1B0GUA9 196 aa20.1■□□□□ 0.81
CGREF1-208ENST00000467539 H3BQ06 376 aaPredicted RBP20.1■□□□□ 0.81
CGREF1-208ENST00000467539 FSCN2O14926 492 aa20.1■□□□□ 0.81
CGREF1-208ENST00000467539 EYA4O95677 639 aa20.1■□□□□ 0.81
CGREF1-208ENST00000467539 ARF4P18085 180 aaPredicted RBP20.1■□□□□ 0.81
CGREF1-208ENST00000467539 CDC25AP30304 524 aa20.1■□□□□ 0.81
CGREF1-208ENST00000467539 FAM187BQ17R55 369 aa20.1■□□□□ 0.81
CGREF1-208ENST00000467539 EP400NLQ6ZTU2 488 aa20.1■□□□□ 0.81
CGREF1-208ENST00000467539 BRAPQ7Z569 592 aa20.1■□□□□ 0.81
CGREF1-208ENST00000467539 ADGRD2Q7Z7M1 963 aa20.1■□□□□ 0.81
CGREF1-208ENST00000467539 EFHBQ8N7U6 833 aa20.1■□□□□ 0.81
CGREF1-208ENST00000467539 CPB2Q96IY4 423 aa20.1■□□□□ 0.81
CGREF1-208ENST00000467539 MMTAG2Q9BU76 263 aaKnown RBP20.1■□□□□ 0.81
CGREF1-208ENST00000467539 NRDE2Q9H7Z3 1164 aa20.1■□□□□ 0.81
CGREF1-208ENST00000467539 TLE6Q9H808 572 aa20.1■□□□□ 0.81
CGREF1-208ENST00000467539 NGRNQ9NPE2 291 aaKnown RBP20.1■□□□□ 0.81
CGREF1-208ENST00000467539 ARID2Q68CP9 1835 aa20.1■□□□□ 0.81
CGREF1-208ENST00000467539 KIAA1671Q9BY89 1806 aa20.09■□□□□ 0.81
CGREF1-208ENST00000467539 TCF20Q9UGU0 1960 aaKnown RBP20.09■□□□□ 0.81
CGREF1-208ENST00000467539 LRRIQ4A6NIV6 560 aa20.09■□□□□ 0.81
CGREF1-208ENST00000467539 PP2D1A8MPX8 630 aa20.09■□□□□ 0.81
CGREF1-208ENST00000467539 CSPG5O95196 566 aa20.09■□□□□ 0.81
CGREF1-208ENST00000467539 ITGA4P13612 1032 aa20.09■□□□□ 0.81
CGREF1-208ENST00000467539 PDCP20941 246 aa20.09■□□□□ 0.81
CGREF1-208ENST00000467539 PBX3P40426 434 aa20.09■□□□□ 0.81
CGREF1-208ENST00000467539 CDCA2Q69YH5 1023 aaPredicted RBP20.09■□□□□ 0.81
CGREF1-208ENST00000467539 PTCRAQ6ISU1 281 aaPredicted RBP20.09■□□□□ 0.81
CGREF1-208ENST00000467539 PPP4R3CPQ6ZMV5 832 aa20.09■□□□□ 0.81
CGREF1-208ENST00000467539 INTS4Q96HW7 963 aaKnown RBP20.09■□□□□ 0.81
CGREF1-208ENST00000467539 PRIMPOLQ96LW4 560 aa20.09■□□□□ 0.81
CGREF1-208ENST00000467539 NECAB3Q96P71 396 aaPredicted RBP20.09■□□□□ 0.81
CGREF1-208ENST00000467539 EIF2AQ9BY44 585 aaKnown RBP20.09■□□□□ 0.81
CGREF1-208ENST00000467539 C2orf40Q9H1Z8 148 aa20.09■□□□□ 0.81
CGREF1-208ENST00000467539 RSAD1Q9HA92 442 aa20.09■□□□□ 0.81
CGREF1-208ENST00000467539 PRMT7Q9NVM4 692 aaPredicted RBP20.09■□□□□ 0.81
CGREF1-208ENST00000467539 IPPQ9Y573 584 aa20.09■□□□□ 0.81
CGREF1-208ENST00000467539 BDP1A6H8Y1 2624 aa20.09■□□□□ 0.81
CGREF1-208ENST00000467539 NT5C1B-RDH14C9J2C7 533 aa20.08■□□□□ 0.81
CGREF1-208ENST00000467539 E9PMD0 336 aa20.08■□□□□ 0.81
CGREF1-208ENST00000467539 LINC01565O15544 149 aa20.08■□□□□ 0.81
CGREF1-208ENST00000467539 GALTP07902 379 aa20.08■□□□□ 0.81
CGREF1-208ENST00000467539 NAMPTP43490 491 aa20.08■□□□□ 0.81
CGREF1-208ENST00000467539 NRIP1P48552 1158 aa20.08■□□□□ 0.81
CGREF1-208ENST00000467539 RNASELQ05823 741 aaKnown RBP20.08■□□□□ 0.81
CGREF1-208ENST00000467539 DLX2Q07687 328 aaPredicted RBP20.08■□□□□ 0.81
CGREF1-208ENST00000467539 PPP2R5AQ15172 486 aa20.08■□□□□ 0.81
CGREF1-208ENST00000467539 HYIQ5T013 277 aa20.08■□□□□ 0.81
CGREF1-208ENST00000467539 RBM23Q86U06 439 aaKnown RBP20.08■□□□□ 0.81
CGREF1-208ENST00000467539 ZNF280BQ86YH2 543 aa20.08■□□□□ 0.81
CGREF1-208ENST00000467539 ZBTB8OSQ8IWT0 167 aa20.08■□□□□ 0.81
CGREF1-208ENST00000467539 URGCPQ8TCY9 931 aa20.08■□□□□ 0.81
CGREF1-208ENST00000467539 BSNDQ8WZ55 320 aa20.08■□□□□ 0.81
CGREF1-208ENST00000467539 KIFAP3Q92845 792 aa20.08■□□□□ 0.81
CGREF1-208ENST00000467539 CDCA3Q99618 268 aaPredicted RBP20.08■□□□□ 0.81
CGREF1-208ENST00000467539 RNF39Q9H2S5 420 aa20.08■□□□□ 0.81
CGREF1-208ENST00000467539 DAXXQ9UER7 740 aaPredicted RBP20.08■□□□□ 0.81
CGREF1-208ENST00000467539 INPP5FQ9Y2H2 1132 aa20.08■□□□□ 0.81
CGREF1-208ENST00000467539 PCDHGC5Q9Y5F6 944 aa20.08■□□□□ 0.81
CGREF1-208ENST00000467539 INPPL1O15357 1258 aa20.07■□□□□ 0.8
CGREF1-208ENST00000467539 B4GALT5O43286 388 aa20.07■□□□□ 0.8
CGREF1-208ENST00000467539 ALDH2P05091 517 aa20.07■□□□□ 0.8
CGREF1-208ENST00000467539 AFF1P51825 1210 aaKnown RBP20.07■□□□□ 0.8
CGREF1-208ENST00000467539 SLC27A1Q6PCB7 646 aa20.07■□□□□ 0.8
CGREF1-208ENST00000467539 TMC7Q7Z402 723 aa20.07■□□□□ 0.8
CGREF1-208ENST00000467539 IFT74Q96LB3 600 aa20.07■□□□□ 0.8
CGREF1-208ENST00000467539 TCF25Q9BQ70 676 aa20.07■□□□□ 0.8
CGREF1-208ENST00000467539 POLD4Q9HCU8 107 aa20.07■□□□□ 0.8
CGREF1-208ENST00000467539 FAM50BQ9Y247 325 aa20.07■□□□□ 0.8
CGREF1-208ENST00000467539 FSD2A1L4K1 749 aa20.06■□□□□ 0.8
CGREF1-208ENST00000467539 VWA3AA6NCI4 1184 aa20.06■□□□□ 0.8
CGREF1-208ENST00000467539 ACKR2O00590 384 aa20.06■□□□□ 0.8
CGREF1-208ENST00000467539 PER2O15055 1255 aa20.06■□□□□ 0.8
CGREF1-208ENST00000467539 ZC3H11AO75152 810 aaKnown RBP eCLIP20.06■□□□□ 0.8
CGREF1-208ENST00000467539 DDHD2O94830 711 aa20.06■□□□□ 0.8
CGREF1-208ENST00000467539 BMP15O95972 392 aa20.06■□□□□ 0.8
CGREF1-208ENST00000467539 FAM178BQ8IXR5 827 aa20.06■□□□□ 0.8
CGREF1-208ENST00000467539 HACE1Q8IYU2 909 aa20.06■□□□□ 0.8
CGREF1-208ENST00000467539 MRPL43Q8N983 215 aaKnown RBP20.06■□□□□ 0.8
CGREF1-208ENST00000467539 TMEM169Q96HH4 297 aa20.06■□□□□ 0.8
CGREF1-208ENST00000467539 IGSF21Q96ID5 467 aa20.06■□□□□ 0.8
CGREF1-208ENST00000467539 MSLNLQ96KJ4 702 aa20.06■□□□□ 0.8
CGREF1-208ENST00000467539 AK8Q96MA6 479 aa20.06■□□□□ 0.8
CGREF1-208ENST00000467539 DNAJB4Q9UDY4 337 aa20.06■□□□□ 0.8
CGREF1-208ENST00000467539 GIT1Q9Y2X7 761 aa20.06■□□□□ 0.8
CGREF1-208ENST00000467539 PLXNA4Q9HCM2 1894 aa20.05■□□□□ 0.8
CGREF1-208ENST00000467539 SLC26A4O43511 780 aa20.05■□□□□ 0.8
CGREF1-208ENST00000467539 IL9P15248 144 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms