RNA–Protein interactions for RNA: ENST00000464577.1

USP48-206, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 2,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-206ENST00000464577 AP3B2Q13367 1082 aa7.85□□□□□ -1.15
USP48-206ENST00000464577 ACVR2BQ13705 512 aa7.85□□□□□ -1.15
USP48-206ENST00000464577 BLMHQ13867 455 aa7.85□□□□□ -1.15
USP48-206ENST00000464577 CMPK2Q5EBM0 449 aa7.85□□□□□ -1.15
USP48-206ENST00000464577 GPATCH4Q5T3I0 446 aaKnown RBP7.85□□□□□ -1.15
USP48-206ENST00000464577 TBC1D9BQ66K14 1250 aa7.85□□□□□ -1.15
USP48-206ENST00000464577 CCDC137Q6PK04 289 aaKnown RBP7.85□□□□□ -1.15
USP48-206ENST00000464577 VSTM1Q6UX27 236 aa7.85□□□□□ -1.15
USP48-206ENST00000464577 ADAT2Q7Z6V5 191 aaKnown RBP7.85□□□□□ -1.15
USP48-206ENST00000464577 CATSPER3Q86XQ3 398 aa7.85□□□□□ -1.15
USP48-206ENST00000464577 LRRC47Q8N1G4 583 aaKnown RBP7.85□□□□□ -1.15
USP48-206ENST00000464577 ETNPPLQ8TBG4 499 aa7.85□□□□□ -1.15
USP48-206ENST00000464577 DYDC1Q8WWB3 177 aa7.85□□□□□ -1.15
USP48-206ENST00000464577 SLCO2A1Q92959 643 aa7.85□□□□□ -1.15
USP48-206ENST00000464577 GRAMD1AQ96CP6 724 aa7.85□□□□□ -1.15
USP48-206ENST00000464577 RAB3IPQ96QF0 476 aaPredicted RBP7.85□□□□□ -1.15
USP48-206ENST00000464577 ANO3Q9BYT9 981 aa7.85□□□□□ -1.15
USP48-206ENST00000464577 INTS2Q9H0H0 1204 aaKnown RBP7.85□□□□□ -1.15
USP48-206ENST00000464577 THAP2Q9H0W7 228 aa7.85□□□□□ -1.15
USP48-206ENST00000464577 WNT8AQ9H1J5 351 aa7.85□□□□□ -1.15
USP48-206ENST00000464577 GPCPD1Q9NPB8 672 aa7.85□□□□□ -1.15
USP48-206ENST00000464577 USP40Q9NVE5 1235 aa7.85□□□□□ -1.15
USP48-206ENST00000464577 MTUS1Q9ULD2 1270 aa7.85□□□□□ -1.15
USP48-206ENST00000464577 CD2APQ9Y5K6 639 aa7.85□□□□□ -1.15
USP48-206ENST00000464577 ALG6Q9Y672 507 aa7.85□□□□□ -1.15
USP48-206ENST00000464577 GAKO14976 1311 aa7.85□□□□□ -1.15
USP48-206ENST00000464577 ZMYM2Q9UBW7 1377 aa7.85□□□□□ -1.15
USP48-206ENST00000464577 TMEM120BA0PK00 339 aa7.85□□□□□ -1.15
USP48-206ENST00000464577 E7ENQ6 273 aa7.85□□□□□ -1.15
USP48-206ENST00000464577 TGFB1I1O43294 461 aa7.85□□□□□ -1.15
USP48-206ENST00000464577 ECM2O94769 699 aaPredicted RBP7.85□□□□□ -1.15
USP48-206ENST00000464577 SPATA31C1P0DKV0 1188 aa7.85□□□□□ -1.15
USP48-206ENST00000464577 ATP2A2P16615 1042 aaKnown RBP7.85□□□□□ -1.15
USP48-206ENST00000464577 TM4SF1P30408 202 aa7.85□□□□□ -1.15
USP48-206ENST00000464577 GCKP35557 465 aa7.85□□□□□ -1.15
USP48-206ENST00000464577 COILP38432 576 aaPredicted RBP7.85□□□□□ -1.15
USP48-206ENST00000464577 STAT3P40763 770 aa7.85□□□□□ -1.15
USP48-206ENST00000464577 SLCO1A2P46721 670 aa7.85□□□□□ -1.15
USP48-206ENST00000464577 PEX5P50542 639 aa7.85□□□□□ -1.15
USP48-206ENST00000464577 CCNHP51946 323 aaPredicted RBP7.85□□□□□ -1.15
USP48-206ENST00000464577 MAP2K1Q02750 393 aaPredicted RBP7.85□□□□□ -1.15
USP48-206ENST00000464577 GABPAQ06546 454 aa7.85□□□□□ -1.15
USP48-206ENST00000464577 PABPC4Q13310 644 aaKnown RBP eCLIP7.85□□□□□ -1.15
USP48-206ENST00000464577 CTTNQ14247 550 aaKnown RBP7.85□□□□□ -1.15
USP48-206ENST00000464577 KCTD19Q17RG1 926 aaPredicted RBP7.85□□□□□ -1.15
USP48-206ENST00000464577 Q4G0T1 1027 aa7.85□□□□□ -1.15
USP48-206ENST00000464577 UBAP2Q5T6F2 1119 aaKnown RBP7.85□□□□□ -1.15
USP48-206ENST00000464577 NAIF1Q69YI7 327 aaPredicted RBP7.85□□□□□ -1.15
USP48-206ENST00000464577 CAPRIN2Q6IMN6 1127 aaKnown RBP7.85□□□□□ -1.15
USP48-206ENST00000464577 MIS18BP1Q6P0N0 1132 aa7.85□□□□□ -1.15
USP48-206ENST00000464577 SLF2Q8IX21 1173 aa7.85□□□□□ -1.15
USP48-206ENST00000464577 KIRREL3Q8IZU9 778 aa7.85□□□□□ -1.15
USP48-206ENST00000464577 TEX9Q8N6V9 391 aa7.85□□□□□ -1.15
USP48-206ENST00000464577 CRYGNQ8WXF5 182 aa7.85□□□□□ -1.15
USP48-206ENST00000464577 ARHGEF2Q92974 986 aaKnown RBP7.85□□□□□ -1.15
USP48-206ENST00000464577 SPDL1Q96EA4 605 aa7.85□□□□□ -1.15
USP48-206ENST00000464577 AGPAT1Q99943 283 aa7.85□□□□□ -1.15
USP48-206ENST00000464577 SLC24A3Q9HC58 644 aa7.85□□□□□ -1.15
USP48-206ENST00000464577 TMOD4Q9NZQ9 345 aa7.85□□□□□ -1.15
USP48-206ENST00000464577 ADAM22Q9P0K1 906 aa7.85□□□□□ -1.15
USP48-206ENST00000464577 WHRNQ9P202 907 aa7.85□□□□□ -1.15
USP48-206ENST00000464577 APEX2Q9UBZ4 518 aa7.85□□□□□ -1.15
USP48-206ENST00000464577 DBR1Q9UK59 544 aaKnown RBP7.85□□□□□ -1.15
USP48-206ENST00000464577 COL16A1Q07092 1604 aaPredicted RBP7.84□□□□□ -1.15
USP48-206ENST00000464577 ABLIM1O14639 778 aa7.84□□□□□ -1.15
USP48-206ENST00000464577 ATP5HO75947 161 aa7.84□□□□□ -1.15
USP48-206ENST00000464577 GCNT3O95395 438 aa7.84□□□□□ -1.15
USP48-206ENST00000464577 EYA4O95677 639 aa7.84□□□□□ -1.15
USP48-206ENST00000464577 PSMC6P62333 389 aa7.84□□□□□ -1.15
USP48-206ENST00000464577 RRP1BQ14684 758 aaKnown RBP7.84□□□□□ -1.15
USP48-206ENST00000464577 SIX1Q15475 284 aaPredicted RBP7.84□□□□□ -1.15
USP48-206ENST00000464577 PARP6Q2NL67 630 aa7.84□□□□□ -1.15
USP48-206ENST00000464577 ANKRD20A2Q5SQ80 823 aa7.84□□□□□ -1.15
USP48-206ENST00000464577 ANKRD20A1Q5TYW2 823 aa7.84□□□□□ -1.15
USP48-206ENST00000464577 ANKRD20A3Q5VUR7 823 aa7.84□□□□□ -1.15
USP48-206ENST00000464577 ERICH1Q86X53 443 aa7.84□□□□□ -1.15
USP48-206ENST00000464577 SLC13A5Q86YT5 568 aaPredicted RBP7.84□□□□□ -1.15
USP48-206ENST00000464577 APLFQ8IW19 511 aaPredicted RBP7.84□□□□□ -1.15
USP48-206ENST00000464577 ZDHHC14Q8IZN3 488 aa7.84□□□□□ -1.15
USP48-206ENST00000464577 PRCCQ92733 491 aaPredicted RBP7.84□□□□□ -1.15
USP48-206ENST00000464577 KRT35Q92764 455 aa7.84□□□□□ -1.15
USP48-206ENST00000464577 CD101Q93033 1021 aa7.84□□□□□ -1.15
USP48-206ENST00000464577 MAGEB18Q96M61 343 aa7.84□□□□□ -1.15
USP48-206ENST00000464577 POLR3CQ9BUI4 534 aaPredicted RBP7.84□□□□□ -1.15
USP48-206ENST00000464577 CCDC113Q9H0I3 377 aa7.84□□□□□ -1.15
USP48-206ENST00000464577 CDC42EP4Q9H3Q1 356 aaKnown RBP7.84□□□□□ -1.15
USP48-206ENST00000464577 TXLNGQ9NUQ3 528 aa7.84□□□□□ -1.15
USP48-206ENST00000464577 TAS2R14Q9NYV8 317 aa7.84□□□□□ -1.15
USP48-206ENST00000464577 LGALS13Q9UHV8 139 aa7.84□□□□□ -1.15
USP48-206ENST00000464577 PCDHB13Q9Y5F0 798 aa7.84□□□□□ -1.15
USP48-206ENST00000464577 CNTNAP4Q9C0A0 1308 aa7.84□□□□□ -1.15
USP48-206ENST00000464577 A6NHS1 94 aa7.83□□□□□ -1.16
USP48-206ENST00000464577 ANKRD63C9JTQ0 380 aa7.83□□□□□ -1.16
USP48-206ENST00000464577 CLIC2O15247 247 aa7.83□□□□□ -1.16
USP48-206ENST00000464577 UNC5CO95185 931 aa7.83□□□□□ -1.16
USP48-206ENST00000464577 ECEL1O95672 775 aa7.83□□□□□ -1.16
USP48-206ENST00000464577 AKR1B1P15121 316 aa7.83□□□□□ -1.16
USP48-206ENST00000464577 GPC5P78333 572 aa7.83□□□□□ -1.16
USP48-206ENST00000464577 MYL7Q01449 175 aa7.83□□□□□ -1.16
USP48-206ENST00000464577 CALCOCO2Q13137 446 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms