RNA–Protein interactions for RNA: ENST00000461433.1

SSBP1-202, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 1,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-202ENST00000461433 GLIS3Q8NEA6 775 aa12.42□□□□□ -0.42
SSBP1-202ENST00000461433 SPATA20Q8TB22 786 aa12.42□□□□□ -0.42
SSBP1-202ENST00000461433 ERCC4Q92889 916 aaPredicted RBP12.42□□□□□ -0.42
SSBP1-202ENST00000461433 AGPAT5Q9NUQ2 364 aa12.42□□□□□ -0.42
SSBP1-202ENST00000461433 PHLPP2Q6ZVD8 1323 aa12.42□□□□□ -0.42
SSBP1-202ENST00000461433 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.42□□□□□ -0.42
SSBP1-202ENST00000461433 DENND3A2RUS2 1198 aa12.42□□□□□ -0.42
SSBP1-202ENST00000461433 K7ERI5 159 aa12.42□□□□□ -0.42
SSBP1-202ENST00000461433 ACKR2O00590 384 aa12.42□□□□□ -0.42
SSBP1-202ENST00000461433 ENPP3O14638 875 aa12.42□□□□□ -0.42
SSBP1-202ENST00000461433 RPN1P04843 607 aaKnown RBP12.42□□□□□ -0.42
SSBP1-202ENST00000461433 ARF4P18085 180 aaPredicted RBP12.42□□□□□ -0.42
SSBP1-202ENST00000461433 GTF2BQ00403 316 aa12.42□□□□□ -0.42
SSBP1-202ENST00000461433 IKBKEQ14164 716 aa12.42□□□□□ -0.42
SSBP1-202ENST00000461433 SHHQ15465 462 aa12.42□□□□□ -0.42
SSBP1-202ENST00000461433 NT5DC1Q5TFE4 455 aa12.42□□□□□ -0.42
SSBP1-202ENST00000461433 RASIP1Q5U651 963 aa12.42□□□□□ -0.42
SSBP1-202ENST00000461433 PSRC1Q6PGN9 363 aaPredicted RBP12.42□□□□□ -0.42
SSBP1-202ENST00000461433 HERVK_113Q902F9 699 aa12.42□□□□□ -0.42
SSBP1-202ENST00000461433 PRIMPOLQ96LW4 560 aa12.42□□□□□ -0.42
SSBP1-202ENST00000461433 MRPL44Q9H9J2 332 aaKnown RBP12.42□□□□□ -0.42
SSBP1-202ENST00000461433 PRMT7Q9NVM4 692 aaPredicted RBP12.42□□□□□ -0.42
SSBP1-202ENST00000461433 CXXC1Q9P0U4 656 aaPredicted RBP12.42□□□□□ -0.42
SSBP1-202ENST00000461433 ABHD14A-ACY1A0A1B0GW23 586 aa12.41□□□□□ -0.42
SSBP1-202ENST00000461433 K7ENM7 598 aa12.41□□□□□ -0.42
SSBP1-202ENST00000461433 PRKCBP05771 671 aa12.41□□□□□ -0.42
SSBP1-202ENST00000461433 MYBP10242 640 aa12.41□□□□□ -0.42
SSBP1-202ENST00000461433 SARSP49591 514 aaKnown RBP12.41□□□□□ -0.42
SSBP1-202ENST00000461433 KCNA1Q09470 495 aa12.41□□□□□ -0.42
SSBP1-202ENST00000461433 MAPK6Q16659 721 aa12.41□□□□□ -0.42
SSBP1-202ENST00000461433 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.41□□□□□ -0.42
SSBP1-202ENST00000461433 FAM43BQ6ZT52 329 aaPredicted RBP12.41□□□□□ -0.42
SSBP1-202ENST00000461433 EPM2AIP1Q7L775 607 aaPredicted RBP12.41□□□□□ -0.42
SSBP1-202ENST00000461433 CRIPAKQ8N1N5 446 aa12.41□□□□□ -0.42
SSBP1-202ENST00000461433 CPB2Q96IY4 423 aa12.41□□□□□ -0.42
SSBP1-202ENST00000461433 ADAM2Q99965 735 aa12.41□□□□□ -0.42
SSBP1-202ENST00000461433 FTHL17Q9BXU8 183 aa12.41□□□□□ -0.42
SSBP1-202ENST00000461433 UBE2OQ9C0C9 1292 aaKnown RBP12.41□□□□□ -0.42
SSBP1-202ENST00000461433 TSPYL2Q9H2G4 693 aaPredicted RBP12.41□□□□□ -0.42
SSBP1-202ENST00000461433 CHST12Q9NRB3 414 aa12.41□□□□□ -0.42
SSBP1-202ENST00000461433 RGS18Q9NS28 235 aa12.41□□□□□ -0.42
SSBP1-202ENST00000461433 TBX20Q9UMR3 447 aa12.41□□□□□ -0.42
SSBP1-202ENST00000461433 PCDHA5Q9Y5H7 936 aa12.41□□□□□ -0.42
SSBP1-202ENST00000461433 TTC3P53804 2025 aa12.4□□□□□ -0.42
SSBP1-202ENST00000461433 CNTNAP2Q9UHC6 1331 aa12.4□□□□□ -0.42
SSBP1-202ENST00000461433 A0A1B0GUA9 196 aa12.4□□□□□ -0.42
SSBP1-202ENST00000461433 H0YCG3 227 aa12.4□□□□□ -0.42
SSBP1-202ENST00000461433 BAIAP3O94812 1187 aa12.4□□□□□ -0.42
SSBP1-202ENST00000461433 ERLIN2O94905 339 aa12.4□□□□□ -0.42
SSBP1-202ENST00000461433 RHOBTB3O94955 611 aa12.4□□□□□ -0.42
SSBP1-202ENST00000461433 HOXD13P35453 343 aa12.4□□□□□ -0.42
SSBP1-202ENST00000461433 STK4Q13043 487 aa12.4□□□□□ -0.42
SSBP1-202ENST00000461433 KCNB1Q14721 858 aa12.4□□□□□ -0.42
SSBP1-202ENST00000461433 CAMK4Q16566 473 aa12.4□□□□□ -0.42
SSBP1-202ENST00000461433 FAM26FQ5R3K3 315 aa12.4□□□□□ -0.42
SSBP1-202ENST00000461433 UBXN11Q5T124 520 aa12.4□□□□□ -0.42
SSBP1-202ENST00000461433 SLC17A8Q8NDX2 589 aa12.4□□□□□ -0.42
SSBP1-202ENST00000461433 CCDC34Q96HJ3 373 aa12.4□□□□□ -0.42
SSBP1-202ENST00000461433 TRAIPQ9BWF2 469 aa12.4□□□□□ -0.42
SSBP1-202ENST00000461433 CLSTN2Q9H4D0 955 aa12.4□□□□□ -0.42
SSBP1-202ENST00000461433 PIN4Q9Y237 131 aaKnown RBP12.4□□□□□ -0.42
SSBP1-202ENST00000461433 RANBP2P49792 3224 aaKnown RBP12.39□□□□□ -0.43
SSBP1-202ENST00000461433 C9IYK1 514 aa12.39□□□□□ -0.43
SSBP1-202ENST00000461433 ABLIM1O14639 778 aa12.39□□□□□ -0.43
SSBP1-202ENST00000461433 GCNT3O95395 438 aa12.39□□□□□ -0.43
SSBP1-202ENST00000461433 ACTN1P12814 892 aa12.39□□□□□ -0.43
SSBP1-202ENST00000461433 SCP2P22307 547 aa12.39□□□□□ -0.43
SSBP1-202ENST00000461433 AXLP30530 894 aa12.39□□□□□ -0.43
SSBP1-202ENST00000461433 WDR5P61964 334 aaKnown RBP12.39□□□□□ -0.43
SSBP1-202ENST00000461433 FAM189BP81408 668 aa12.39□□□□□ -0.43
SSBP1-202ENST00000461433 PSMD2Q13200 908 aa12.39□□□□□ -0.43
SSBP1-202ENST00000461433 PRPF4BQ13523 1007 aaKnown RBP12.39□□□□□ -0.43
SSBP1-202ENST00000461433 CHRDL2Q6WN34 429 aa12.39□□□□□ -0.43
SSBP1-202ENST00000461433 CDR2LQ86X02 465 aaPredicted RBP12.39□□□□□ -0.43
SSBP1-202ENST00000461433 KIAA0895Q8NCT3 520 aa12.39□□□□□ -0.43
SSBP1-202ENST00000461433 ZNF507Q8TCN5 953 aa12.39□□□□□ -0.43
SSBP1-202ENST00000461433 GSDMAQ96QA5 445 aa12.39□□□□□ -0.43
SSBP1-202ENST00000461433 ACO2Q99798 780 aaKnown RBP12.39□□□□□ -0.43
SSBP1-202ENST00000461433 TARS2Q9BW92 718 aaKnown RBP12.39□□□□□ -0.43
SSBP1-202ENST00000461433 IKZF4Q9H2S9 585 aa12.39□□□□□ -0.43
SSBP1-202ENST00000461433 PDZD7Q9H5P4 517 aa12.39□□□□□ -0.43
SSBP1-202ENST00000461433 PTPRHQ9HD43 1115 aa12.39□□□□□ -0.43
SSBP1-202ENST00000461433 SLC39A2Q9NP94 309 aa12.39□□□□□ -0.43
SSBP1-202ENST00000461433 HOOK1Q9UJC3 728 aaKnown RBP12.39□□□□□ -0.43
SSBP1-202ENST00000461433 PRPF6O94906 941 aaKnown RBP12.38□□□□□ -0.43
SSBP1-202ENST00000461433 PIGRP01833 764 aa12.38□□□□□ -0.43
SSBP1-202ENST00000461433 ZSCAN20P17040 1043 aaPredicted RBP12.38□□□□□ -0.43
SSBP1-202ENST00000461433 PROZP22891 400 aa12.38□□□□□ -0.43
SSBP1-202ENST00000461433 DEFB103AP81534 67 aa12.38□□□□□ -0.43
SSBP1-202ENST00000461433 STRN3Q13033 797 aa12.38□□□□□ -0.43
SSBP1-202ENST00000461433 L1TD1Q5T7N2 865 aaKnown RBP12.38□□□□□ -0.43
SSBP1-202ENST00000461433 EEF1DP3Q658K8 133 aa12.38□□□□□ -0.43
SSBP1-202ENST00000461433 SLC39A4Q6P5W5 647 aa12.38□□□□□ -0.43
SSBP1-202ENST00000461433 MAP4K3Q8IVH8 894 aa12.38□□□□□ -0.43
SSBP1-202ENST00000461433 SCFD1Q8WVM8 642 aa12.38□□□□□ -0.43
SSBP1-202ENST00000461433 HVCN1Q96D96 273 aa12.38□□□□□ -0.43
SSBP1-202ENST00000461433 EIF2AQ9BY44 585 aaKnown RBP12.38□□□□□ -0.43
SSBP1-202ENST00000461433 EXOC1Q9NV70 894 aa12.38□□□□□ -0.43
SSBP1-202ENST00000461433 A0A0U1RQF3 1178 aa12.38□□□□□ -0.43
SSBP1-202ENST00000461433 EFCAB14O75071 495 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms