RNA–Protein interactions for RNA: ENST00000461113.5

HDAC4-207, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 1,019 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-207ENST00000461113 TCP11Q8WWU5 503 aa13.92□□□□□ -0.18
HDAC4-207ENST00000461113 SCLT1Q96NL6 688 aa13.92□□□□□ -0.18
HDAC4-207ENST00000461113 SCAND2PQ9GZW5 306 aaPredicted RBP13.92□□□□□ -0.18
HDAC4-207ENST00000461113 SMOC2Q9H3U7 446 aa13.92□□□□□ -0.18
HDAC4-207ENST00000461113 TSHZ2Q9NRE2 1034 aa13.92□□□□□ -0.18
HDAC4-207ENST00000461113 SORCS3Q9UPU3 1222 aa13.92□□□□□ -0.18
HDAC4-207ENST00000461113 KIAA1024Q9UPX6 916 aa13.92□□□□□ -0.18
HDAC4-207ENST00000461113 RALGAPA2Q2PPJ7 1873 aa13.92□□□□□ -0.18
HDAC4-207ENST00000461113 NLRC5Q86WI3 1866 aa13.92□□□□□ -0.18
HDAC4-207ENST00000461113 DNAH14Q0VDD8 3507 aa13.92□□□□□ -0.18
HDAC4-207ENST00000461113 MED24O75448 989 aa13.91□□□□□ -0.18
HDAC4-207ENST00000461113 SPATA31C1P0DKV0 1188 aa13.91□□□□□ -0.18
HDAC4-207ENST00000461113 IL17AQ16552 155 aa13.91□□□□□ -0.18
HDAC4-207ENST00000461113 ODR4Q5SWX8 454 aa13.91□□□□□ -0.18
HDAC4-207ENST00000461113 MARCH8Q5T0T0 291 aa13.91□□□□□ -0.18
HDAC4-207ENST00000461113 PLA2G4FQ68DD2 849 aa13.91□□□□□ -0.18
HDAC4-207ENST00000461113 ANO5Q75V66 913 aa13.91□□□□□ -0.18
HDAC4-207ENST00000461113 PIGOQ8TEQ8 1089 aa13.91□□□□□ -0.18
HDAC4-207ENST00000461113 APOL5Q9BWW9 433 aa13.91□□□□□ -0.18
HDAC4-207ENST00000461113 S1PR5Q9H228 398 aa13.91□□□□□ -0.18
HDAC4-207ENST00000461113 MFSD1Q9H3U5 465 aa13.91□□□□□ -0.18
HDAC4-207ENST00000461113 DDX19AQ9NUU7 478 aaKnown RBP13.91□□□□□ -0.18
HDAC4-207ENST00000461113 CHMP5Q9NZZ3 219 aa13.91□□□□□ -0.18
HDAC4-207ENST00000461113 DBR1Q9UK59 544 aaKnown RBP13.91□□□□□ -0.18
HDAC4-207ENST00000461113 AKT3Q9Y243 479 aa13.91□□□□□ -0.18
HDAC4-207ENST00000461113 KMT2BQ9UMN6 2715 aaPredicted RBP13.9□□□□□ -0.18
HDAC4-207ENST00000461113 CUTAO60888 179 aa13.9□□□□□ -0.18
HDAC4-207ENST00000461113 MAFO75444 373 aaPredicted RBP13.9□□□□□ -0.18
HDAC4-207ENST00000461113 DGAT1O75907 488 aa13.9□□□□□ -0.18
HDAC4-207ENST00000461113 C22orf31O95567 290 aa13.9□□□□□ -0.18
HDAC4-207ENST00000461113 CHRNA1P02708 482 aa13.9□□□□□ -0.18
HDAC4-207ENST00000461113 MRPS6P82932 125 aaKnown RBP13.9□□□□□ -0.18
HDAC4-207ENST00000461113 PUM1Q14671 1186 aaKnown RBP eCLIP13.9□□□□□ -0.18
HDAC4-207ENST00000461113 TARBP2Q15633 366 aaKnown RBP13.9□□□□□ -0.18
HDAC4-207ENST00000461113 PAN2Q504Q3 1202 aaKnown RBP13.9□□□□□ -0.18
HDAC4-207ENST00000461113 POTEGQ6S5H5 508 aa13.9□□□□□ -0.18
HDAC4-207ENST00000461113 RUFY4Q6ZNE9 571 aa13.9□□□□□ -0.18
HDAC4-207ENST00000461113 CMTR2Q8IYT2 770 aaKnown RBP13.9□□□□□ -0.18
HDAC4-207ENST00000461113 SPATA32Q96LK8 384 aa13.9□□□□□ -0.18
HDAC4-207ENST00000461113 IPO9Q96P70 1041 aaKnown RBP13.9□□□□□ -0.18
HDAC4-207ENST00000461113 MTRQ99707 1265 aa13.9□□□□□ -0.18
HDAC4-207ENST00000461113 CSRNP2Q9H175 543 aa13.9□□□□□ -0.18
HDAC4-207ENST00000461113 ATP6V0A4Q9HBG4 840 aa13.9□□□□□ -0.18
HDAC4-207ENST00000461113 FAM13BQ9NYF5 915 aa13.9□□□□□ -0.18
HDAC4-207ENST00000461113 FBXO2Q9UK22 296 aaPredicted RBP13.9□□□□□ -0.18
HDAC4-207ENST00000461113 TRPV2Q9Y5S1 764 aa13.9□□□□□ -0.18
HDAC4-207ENST00000461113 WDR87Q6ZQQ6 2873 aa13.89□□□□□ -0.19
HDAC4-207ENST00000461113 PP2D1A8MPX8 630 aa13.89□□□□□ -0.19
HDAC4-207ENST00000461113 ZBTB42B2RXF5 422 aa13.89□□□□□ -0.19
HDAC4-207ENST00000461113 ASAP2O43150 1006 aa13.89□□□□□ -0.19
HDAC4-207ENST00000461113 STBD1O95210 358 aa13.89□□□□□ -0.19
HDAC4-207ENST00000461113 SSBP05455 408 aaKnown RBP eCLIP13.89□□□□□ -0.19
HDAC4-207ENST00000461113 CDC25AP30304 524 aa13.89□□□□□ -0.19
HDAC4-207ENST00000461113 RARRES1P49788 294 aa13.89□□□□□ -0.19
HDAC4-207ENST00000461113 CLCN5P51795 746 aa13.89□□□□□ -0.19
HDAC4-207ENST00000461113 NPEPPSP55786 919 aa13.89□□□□□ -0.19
HDAC4-207ENST00000461113 LPIN1Q14693 890 aa13.89□□□□□ -0.19
HDAC4-207ENST00000461113 DUSP6Q16828 381 aa13.89□□□□□ -0.19
HDAC4-207ENST00000461113 LRRC71Q8N4P6 559 aa13.89□□□□□ -0.19
HDAC4-207ENST00000461113 ZNF579Q8NAF0 562 aaKnown RBP13.89□□□□□ -0.19
HDAC4-207ENST00000461113 MCPH1Q8NEM0 835 aa13.89□□□□□ -0.19
HDAC4-207ENST00000461113 PSPC1Q8WXF1 523 aaKnown RBP13.89□□□□□ -0.19
HDAC4-207ENST00000461113 CCSER1Q9C0I3 900 aa13.89□□□□□ -0.19
HDAC4-207ENST00000461113 SUCLA2Q9P2R7 463 aaPredicted RBP13.89□□□□□ -0.19
HDAC4-207ENST00000461113 WRAP73Q9P2S5 460 aaPredicted RBP13.89□□□□□ -0.19
HDAC4-207ENST00000461113 GINS2Q9Y248 185 aa13.89□□□□□ -0.19
HDAC4-207ENST00000461113 ZDHHC9Q9Y397 364 aa13.89□□□□□ -0.19
HDAC4-207ENST00000461113 NR2E1Q9Y466 385 aa13.89□□□□□ -0.19
HDAC4-207ENST00000461113 CACNA1GO43497 2377 aa13.89□□□□□ -0.19
HDAC4-207ENST00000461113 ZNF292O60281 2723 aa13.89□□□□□ -0.19
HDAC4-207ENST00000461113 DOCK5Q9H7D0 1870 aa13.89□□□□□ -0.19
HDAC4-207ENST00000461113 TMEM150BA6NC51 233 aa13.88□□□□□ -0.19
HDAC4-207ENST00000461113 GOLGA6L4A6NEF3 574 aa13.88□□□□□ -0.19
HDAC4-207ENST00000461113 CLCN3P51790 818 aa13.88□□□□□ -0.19
HDAC4-207ENST00000461113 TFDP1Q14186 410 aa13.88□□□□□ -0.19
HDAC4-207ENST00000461113 EMC2Q15006 297 aa13.88□□□□□ -0.19
HDAC4-207ENST00000461113 ANGPT1Q15389 498 aa13.88□□□□□ -0.19
HDAC4-207ENST00000461113 RRAGBQ5VZM2 374 aa13.88□□□□□ -0.19
HDAC4-207ENST00000461113 ANKRD54Q6NXT1 300 aa13.88□□□□□ -0.19
HDAC4-207ENST00000461113 SYCE2Q6PIF2 218 aa13.88□□□□□ -0.19
HDAC4-207ENST00000461113 PADI6Q6TGC4 694 aa13.88□□□□□ -0.19
HDAC4-207ENST00000461113 CCDC73Q6ZRK6 1079 aa13.88□□□□□ -0.19
HDAC4-207ENST00000461113 FAM43BQ6ZT52 329 aaPredicted RBP13.88□□□□□ -0.19
HDAC4-207ENST00000461113 KIAA0319LQ8IZA0 1049 aa13.88□□□□□ -0.19
HDAC4-207ENST00000461113 FLCNQ8NFG4 579 aa13.88□□□□□ -0.19
HDAC4-207ENST00000461113 NLRP7Q8WX94 980 aa13.88□□□□□ -0.19
HDAC4-207ENST00000461113 CLIC6Q96NY7 704 aa13.88□□□□□ -0.19
HDAC4-207ENST00000461113 CDCA3Q99618 268 aaPredicted RBP13.88□□□□□ -0.19
HDAC4-207ENST00000461113 SH2D3AQ9BRG2 576 aa13.88□□□□□ -0.19
HDAC4-207ENST00000461113 PYM1Q9BRP8 204 aaKnown RBP13.88□□□□□ -0.19
HDAC4-207ENST00000461113 CELF4Q9BZC1 486 aaKnown RBP13.88□□□□□ -0.19
HDAC4-207ENST00000461113 BHMT2Q9H2M3 363 aa13.88□□□□□ -0.19
HDAC4-207ENST00000461113 DHX33Q9H6R0 707 aaKnown RBP13.88□□□□□ -0.19
HDAC4-207ENST00000461113 RCOR1Q9UKL0 485 aa13.88□□□□□ -0.19
HDAC4-207ENST00000461113 CDY2AQ9Y6F7 541 aa13.88□□□□□ -0.19
HDAC4-207ENST00000461113 DMXL1Q9Y485 3027 aa13.88□□□□□ -0.19
HDAC4-207ENST00000461113 C2CD4DB7Z1M9 353 aa13.87□□□□□ -0.19
HDAC4-207ENST00000461113 USO1O60763 962 aaKnown RBP13.87□□□□□ -0.19
HDAC4-207ENST00000461113 LMNAP02545 664 aaKnown RBP13.87□□□□□ -0.19
HDAC4-207ENST00000461113 SRGAP2BP0DMP2 458 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms