RNA–Protein interactions for RNA: ENST00000452226.5

PDLIM2-214, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2

Gene PDLIM2, Length 845 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-214ENST00000452226 PCDHB2Q9Y5E7 798 aa20.51■□□□□ 0.87
PDLIM2-214ENST00000452226 ZNF318Q5VUA4 2279 aa20.51■□□□□ 0.87
PDLIM2-214ENST00000452226 C2orf71A6NGG8 1288 aa20.5■□□□□ 0.87
PDLIM2-214ENST00000452226 NEMFO60524 1076 aa20.5■□□□□ 0.87
PDLIM2-214ENST00000452226 OFD1O75665 1012 aa20.5■□□□□ 0.87
PDLIM2-214ENST00000452226 CA8P35219 290 aa20.5■□□□□ 0.87
PDLIM2-214ENST00000452226 TRAPPC10P48553 1259 aa20.5■□□□□ 0.87
PDLIM2-214ENST00000452226 RNASELQ05823 741 aaKnown RBP20.5■□□□□ 0.87
PDLIM2-214ENST00000452226 ORC2Q13416 577 aaPredicted RBP20.5■□□□□ 0.87
PDLIM2-214ENST00000452226 BMS1Q14692 1282 aaKnown RBP20.5■□□□□ 0.87
PDLIM2-214ENST00000452226 CBX2Q14781 532 aaPredicted RBP20.5■□□□□ 0.87
PDLIM2-214ENST00000452226 CALCRLQ16602 461 aa20.5■□□□□ 0.87
PDLIM2-214ENST00000452226 SYCE2Q6PIF2 218 aa20.5■□□□□ 0.87
PDLIM2-214ENST00000452226 HFE2Q6ZVN8 426 aa20.5■□□□□ 0.87
PDLIM2-214ENST00000452226 FERMT3Q86UX7 667 aa20.5■□□□□ 0.87
PDLIM2-214ENST00000452226 VPS52Q8N1B4 723 aa20.5■□□□□ 0.87
PDLIM2-214ENST00000452226 RNF149Q8NC42 400 aa20.5■□□□□ 0.87
PDLIM2-214ENST00000452226 PGBD4Q96DM1 585 aa20.5■□□□□ 0.87
PDLIM2-214ENST00000452226 EIF2AK1Q9BQI3 630 aaKnown RBP20.5■□□□□ 0.87
PDLIM2-214ENST00000452226 APOL5Q9BWW9 433 aa20.5■□□□□ 0.87
PDLIM2-214ENST00000452226 NRDE2Q9H7Z3 1164 aa20.5■□□□□ 0.87
PDLIM2-214ENST00000452226 PCDHA12Q9UN75 941 aa20.5■□□□□ 0.87
PDLIM2-214ENST00000452226 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.5■□□□□ 0.87
PDLIM2-214ENST00000452226 CARNS1A5YM72 827 aa20.49■□□□□ 0.87
PDLIM2-214ENST00000452226 ASAP2O43150 1006 aa20.49■□□□□ 0.87
PDLIM2-214ENST00000452226 SLITRK3O94933 977 aa20.49■□□□□ 0.87
PDLIM2-214ENST00000452226 CXCL14O95715 111 aa20.49■□□□□ 0.87
PDLIM2-214ENST00000452226 HOXB8P17481 243 aaPredicted RBP20.49■□□□□ 0.87
PDLIM2-214ENST00000452226 HOXA11P31270 313 aaPredicted RBP20.49■□□□□ 0.87
PDLIM2-214ENST00000452226 TMEM173Q86WV6 379 aaPredicted RBP20.49■□□□□ 0.87
PDLIM2-214ENST00000452226 FBXL18Q96ME1 805 aa20.49■□□□□ 0.87
PDLIM2-214ENST00000452226 MTRQ99707 1265 aa20.49■□□□□ 0.87
PDLIM2-214ENST00000452226 GBP3Q9H0R5 595 aa20.49■□□□□ 0.87
PDLIM2-214ENST00000452226 TMEM60Q9H2L4 133 aa20.49■□□□□ 0.87
PDLIM2-214ENST00000452226 SMC3Q9UQE7 1217 aa20.49■□□□□ 0.87
PDLIM2-214ENST00000452226 WDFY4Q6ZS81 3184 aa20.48■□□□□ 0.87
PDLIM2-214ENST00000452226 GALTP07902 379 aa20.48■□□□□ 0.87
PDLIM2-214ENST00000452226 ATP2B1P20020 1258 aa20.48■□□□□ 0.87
PDLIM2-214ENST00000452226 NHLH1Q02575 133 aa20.48■□□□□ 0.87
PDLIM2-214ENST00000452226 AGMOQ6ZNB7 445 aa20.48■□□□□ 0.87
PDLIM2-214ENST00000452226 MRPL10Q7Z7H8 261 aaKnown RBP20.48■□□□□ 0.87
PDLIM2-214ENST00000452226 URGCPQ8TCY9 931 aa20.48■□□□□ 0.87
PDLIM2-214ENST00000452226 CASP10Q92851 521 aa20.48■□□□□ 0.87
PDLIM2-214ENST00000452226 IGSF21Q96ID5 467 aa20.48■□□□□ 0.87
PDLIM2-214ENST00000452226 HSD17B14Q9BPX1 270 aa20.48■□□□□ 0.87
PDLIM2-214ENST00000452226 TTC12Q9H892 705 aaPredicted RBP20.48■□□□□ 0.87
PDLIM2-214ENST00000452226 DNAJB4Q9UDY4 337 aa20.48■□□□□ 0.87
PDLIM2-214ENST00000452226 HCFC2Q9Y5Z7 792 aa20.48■□□□□ 0.87
PDLIM2-214ENST00000452226 MYO10Q9HD67 2058 aa20.48■□□□□ 0.87
PDLIM2-214ENST00000452226 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.47■□□□□ 0.87
PDLIM2-214ENST00000452226 CLASP2O75122 1294 aaKnown RBP20.47■□□□□ 0.87
PDLIM2-214ENST00000452226 MCM7P33993 719 aa20.47■□□□□ 0.87
PDLIM2-214ENST00000452226 MRE11P49959 708 aa20.47■□□□□ 0.87
PDLIM2-214ENST00000452226 GNL2Q13823 731 aaKnown RBP20.47■□□□□ 0.87
PDLIM2-214ENST00000452226 TPRNQ4KMQ1 711 aa20.47■□□□□ 0.87
PDLIM2-214ENST00000452226 UBXN11Q5T124 520 aa20.47■□□□□ 0.87
PDLIM2-214ENST00000452226 BMP8AQ7Z5Y6 402 aa20.47■□□□□ 0.87
PDLIM2-214ENST00000452226 DDX53Q86TM3 631 aaKnown RBP20.47■□□□□ 0.87
PDLIM2-214ENST00000452226 ZNF280BQ86YH2 543 aa20.47■□□□□ 0.87
PDLIM2-214ENST00000452226 BCL7CQ8WUZ0 217 aaPredicted RBP20.47■□□□□ 0.87
PDLIM2-214ENST00000452226 PRRX2Q99811 253 aa20.47■□□□□ 0.87
PDLIM2-214ENST00000452226 ZBP1Q9H171 429 aa20.47■□□□□ 0.87
PDLIM2-214ENST00000452226 XPNPEP1Q9NQW7 623 aa20.47■□□□□ 0.87
PDLIM2-214ENST00000452226 ZDBF2Q9HCK1 2354 aa20.47■□□□□ 0.87
PDLIM2-214ENST00000452226 ERLIN2O94905 339 aa20.46■□□□□ 0.87
PDLIM2-214ENST00000452226 LYPLA2O95372 231 aa20.46■□□□□ 0.87
PDLIM2-214ENST00000452226 TXKP42681 527 aa20.46■□□□□ 0.87
PDLIM2-214ENST00000452226 SLC11A1P49279 550 aa20.46■□□□□ 0.87
PDLIM2-214ENST00000452226 TOB1P50616 345 aaPredicted RBP20.46■□□□□ 0.87
PDLIM2-214ENST00000452226 MXD4Q14582 209 aaPredicted RBP20.46■□□□□ 0.87
PDLIM2-214ENST00000452226 ZNF174Q15697 407 aa20.46■□□□□ 0.87
PDLIM2-214ENST00000452226 TTC38Q5R3I4 469 aa20.46■□□□□ 0.87
PDLIM2-214ENST00000452226 SUGP1Q8IWZ8 645 aaKnown RBP20.46■□□□□ 0.87
PDLIM2-214ENST00000452226 TMEM87AQ8NBN3 555 aa20.46■□□□□ 0.87
PDLIM2-214ENST00000452226 AUTS2Q8WXX7 1259 aa20.46■□□□□ 0.87
PDLIM2-214ENST00000452226 PBXIP1Q96AQ6 731 aa20.46■□□□□ 0.87
PDLIM2-214ENST00000452226 RSAD1Q9HA92 442 aa20.46■□□□□ 0.87
PDLIM2-214ENST00000452226 ANKEF1Q9NU02 776 aa20.46■□□□□ 0.87
PDLIM2-214ENST00000452226 B4GALT3O60512 393 aa20.45■□□□□ 0.86
PDLIM2-214ENST00000452226 CTSAP10619 480 aa20.45■□□□□ 0.86
PDLIM2-214ENST00000452226 AFF1P51825 1210 aaKnown RBP20.45■□□□□ 0.86
PDLIM2-214ENST00000452226 PTENP60484 403 aa20.45■□□□□ 0.86
PDLIM2-214ENST00000452226 ZXDAP98168 799 aa20.45■□□□□ 0.86
PDLIM2-214ENST00000452226 TRIM67Q6ZTA4 783 aa20.45■□□□□ 0.86
PDLIM2-214ENST00000452226 C4orf32Q8N8J7 132 aa20.45■□□□□ 0.86
PDLIM2-214ENST00000452226 CCDC43Q96MW1 224 aaKnown RBP20.45■□□□□ 0.86
PDLIM2-214ENST00000452226 KANSL3Q9P2N6 904 aa20.45■□□□□ 0.86
PDLIM2-214ENST00000452226 NOL7Q9UMY1 257 aaKnown RBP20.45■□□□□ 0.86
PDLIM2-214ENST00000452226 IRAK3Q9Y616 596 aa20.45■□□□□ 0.86
PDLIM2-214ENST00000452226 CNTNAP2Q9UHC6 1331 aa20.45■□□□□ 0.86
PDLIM2-214ENST00000452226 TMEM221A6NGB7 291 aa20.44■□□□□ 0.86
PDLIM2-214ENST00000452226 M0R296 226 aa20.44■□□□□ 0.86
PDLIM2-214ENST00000452226 DGAT1O75907 488 aa20.44■□□□□ 0.86
PDLIM2-214ENST00000452226 DDHD2O94830 711 aa20.44■□□□□ 0.86
PDLIM2-214ENST00000452226 NCLP19338 710 aaKnown RBP20.44■□□□□ 0.86
PDLIM2-214ENST00000452226 GIT2Q14161 759 aa20.44■□□□□ 0.86
PDLIM2-214ENST00000452226 TFDP1Q14186 410 aa20.44■□□□□ 0.86
PDLIM2-214ENST00000452226 PCBP1Q15365 356 aaKnown RBP eCLIP20.44■□□□□ 0.86
PDLIM2-214ENST00000452226 LARP1BQ659C4 914 aaKnown RBP20.44■□□□□ 0.86
PDLIM2-214ENST00000452226 CES5AQ6NT32 575 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms