RNA–Protein interactions for RNA: ENST00000449575.6

CCDC171-203, Transcript of coiled-coil domain containing 171, humanhuman

TSL 2

Gene CCDC171, Length 2,628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-203ENST00000449575 FAM53CQ9NYF3 392 aa10.85□□□□□ -0.67
CCDC171-203ENST00000449575 PADI3Q9ULW8 664 aa10.85□□□□□ -0.67
CCDC171-203ENST00000449575 SLC16A4O15374 487 aa10.84□□□□□ -0.67
CCDC171-203ENST00000449575 MGEA5O60502 916 aa10.84□□□□□ -0.67
CCDC171-203ENST00000449575 CXCL10P02778 98 aa10.84□□□□□ -0.67
CCDC171-203ENST00000449575 IDEP14735 1019 aa10.84□□□□□ -0.67
CCDC171-203ENST00000449575 PTENP60484 403 aa10.84□□□□□ -0.67
CCDC171-203ENST00000449575 MXD4Q14582 209 aaPredicted RBP10.84□□□□□ -0.67
CCDC171-203ENST00000449575 PLEKHG4Q58EX7 1191 aa10.84□□□□□ -0.67
CCDC171-203ENST00000449575 ZNF365Q70YC5 407 aa10.84□□□□□ -0.67
CCDC171-203ENST00000449575 OTOP2Q7RTS6 562 aa10.84□□□□□ -0.67
CCDC171-203ENST00000449575 TAS1R3Q7RTX0 852 aa10.84□□□□□ -0.67
CCDC171-203ENST00000449575 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.84□□□□□ -0.67
CCDC171-203ENST00000449575 TMCO2Q7Z6W1 182 aaPredicted RBP10.84□□□□□ -0.67
CCDC171-203ENST00000449575 SFR1Q86XK3 245 aa10.84□□□□□ -0.67
CCDC171-203ENST00000449575 EXOC8Q8IYI6 725 aa10.84□□□□□ -0.67
CCDC171-203ENST00000449575 CNNM3Q8NE01 707 aa10.84□□□□□ -0.67
CCDC171-203ENST00000449575 GDF15Q99988 308 aa10.84□□□□□ -0.67
CCDC171-203ENST00000449575 LBHD1Q9BQE6 289 aaPredicted RBP10.84□□□□□ -0.67
CCDC171-203ENST00000449575 IFIH1Q9BYX4 1025 aaKnown RBP10.84□□□□□ -0.67
CCDC171-203ENST00000449575 IKZF4Q9H2S9 585 aa10.84□□□□□ -0.67
CCDC171-203ENST00000449575 DACT1Q9NYF0 836 aa10.84□□□□□ -0.67
CCDC171-203ENST00000449575 CXXC1Q9P0U4 656 aaPredicted RBP10.84□□□□□ -0.67
CCDC171-203ENST00000449575 ST3GAL5Q9UNP4 418 aa10.84□□□□□ -0.67
CCDC171-203ENST00000449575 CCDC169A6NNP5 214 aa10.84□□□□□ -0.67
CCDC171-203ENST00000449575 B4GALT5O43286 388 aa10.84□□□□□ -0.67
CCDC171-203ENST00000449575 NMT1P30419 496 aaKnown RBP10.84□□□□□ -0.67
CCDC171-203ENST00000449575 ZNF131P52739 623 aa10.84□□□□□ -0.67
CCDC171-203ENST00000449575 RTN4RL1Q86UN2 441 aaPredicted RBP10.84□□□□□ -0.67
CCDC171-203ENST00000449575 CDR2LQ86X02 465 aaPredicted RBP10.84□□□□□ -0.67
CCDC171-203ENST00000449575 CEP57L1Q8IYX8 460 aa10.84□□□□□ -0.67
CCDC171-203ENST00000449575 PLCD3Q8N3E9 789 aa10.84□□□□□ -0.67
CCDC171-203ENST00000449575 LINC01599Q8WXQ3 324 aa10.84□□□□□ -0.67
CCDC171-203ENST00000449575 KIFAP3Q92845 792 aa10.84□□□□□ -0.67
CCDC171-203ENST00000449575 IL23AQ9NPF7 189 aa10.84□□□□□ -0.67
CCDC171-203ENST00000449575 KCND2Q9NZV8 630 aa10.84□□□□□ -0.67
CCDC171-203ENST00000449575 RPS6KA5O75582 802 aa10.83□□□□□ -0.68
CCDC171-203ENST00000449575 FAM13AO94988 1023 aa10.83□□□□□ -0.68
CCDC171-203ENST00000449575 PLS3P13797 630 aa10.83□□□□□ -0.68
CCDC171-203ENST00000449575 CASP5P51878 434 aa10.83□□□□□ -0.68
CCDC171-203ENST00000449575 ASIC1P78348 528 aa10.83□□□□□ -0.68
CCDC171-203ENST00000449575 MBTD1Q05BQ5 628 aa10.83□□□□□ -0.68
CCDC171-203ENST00000449575 PNOCQ13519 176 aa10.83□□□□□ -0.68
CCDC171-203ENST00000449575 TMEM240Q5SV17 173 aa10.83□□□□□ -0.68
CCDC171-203ENST00000449575 ODR4Q5SWX8 454 aa10.83□□□□□ -0.68
CCDC171-203ENST00000449575 TSHZ1Q6ZSZ6 1077 aa10.83□□□□□ -0.68
CCDC171-203ENST00000449575 ZNF410Q86VK4 478 aa10.83□□□□□ -0.68
CCDC171-203ENST00000449575 MYCT1Q8N699 235 aa10.83□□□□□ -0.68
CCDC171-203ENST00000449575 DRC1Q96MC2 740 aa10.83□□□□□ -0.68
CCDC171-203ENST00000449575 CUEDC2Q9H467 287 aa10.83□□□□□ -0.68
CCDC171-203ENST00000449575 PRDM16Q9HAZ2 1276 aa10.83□□□□□ -0.68
CCDC171-203ENST00000449575 ERVK-5Q9HDB9 667 aa10.83□□□□□ -0.68
CCDC171-203ENST00000449575 ODF2LQ9ULJ1 636 aa10.83□□□□□ -0.68
CCDC171-203ENST00000449575 EYSQ5T1H1 3165 aa10.83□□□□□ -0.68
CCDC171-203ENST00000449575 INO80B-WBP1J3KQ70 363 aa10.83□□□□□ -0.68
CCDC171-203ENST00000449575 ASAP2O43150 1006 aa10.83□□□□□ -0.68
CCDC171-203ENST00000449575 KLRC4O43908 158 aa10.83□□□□□ -0.68
CCDC171-203ENST00000449575 NAMPTP43490 491 aa10.83□□□□□ -0.68
CCDC171-203ENST00000449575 SHHQ15465 462 aa10.83□□□□□ -0.68
CCDC171-203ENST00000449575 AMHR2Q16671 573 aa10.83□□□□□ -0.68
CCDC171-203ENST00000449575 ZC2HC1CQ53FD0 456 aaPredicted RBP10.83□□□□□ -0.68
CCDC171-203ENST00000449575 SPC24Q8NBT2 197 aa10.83□□□□□ -0.68
CCDC171-203ENST00000449575 CPB2Q96IY4 423 aa10.83□□□□□ -0.68
CCDC171-203ENST00000449575 C7orf25Q9BPX7 421 aa10.83□□□□□ -0.68
CCDC171-203ENST00000449575 GCOM2Q9BZD3 368 aaPredicted RBP10.83□□□□□ -0.68
CCDC171-203ENST00000449575 INO80BQ9C086 356 aaPredicted RBP10.83□□□□□ -0.68
CCDC171-203ENST00000449575 PANK4Q9NVE7 773 aa10.83□□□□□ -0.68
CCDC171-203ENST00000449575 MYO9BQ13459 2157 aa10.82□□□□□ -0.68
CCDC171-203ENST00000449575 FRMD3A2A2Y4 597 aa10.82□□□□□ -0.68
CCDC171-203ENST00000449575 KCNA1Q09470 495 aa10.82□□□□□ -0.68
CCDC171-203ENST00000449575 COASYQ13057 564 aa10.82□□□□□ -0.68
CCDC171-203ENST00000449575 PAK2Q13177 524 aa10.82□□□□□ -0.68
CCDC171-203ENST00000449575 DMP1Q13316 513 aaPredicted RBP10.82□□□□□ -0.68
CCDC171-203ENST00000449575 CDCA2Q69YH5 1023 aaPredicted RBP10.82□□□□□ -0.68
CCDC171-203ENST00000449575 CHRDL2Q6WN34 429 aa10.82□□□□□ -0.68
CCDC171-203ENST00000449575 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.82□□□□□ -0.68
CCDC171-203ENST00000449575 TMEM161BQ8NDZ6 487 aa10.82□□□□□ -0.68
CCDC171-203ENST00000449575 IFT74Q96LB3 600 aa10.82□□□□□ -0.68
CCDC171-203ENST00000449575 CCDC113Q9H0I3 377 aa10.82□□□□□ -0.68
CCDC171-203ENST00000449575 PARVGQ9HBI0 331 aa10.82□□□□□ -0.68
CCDC171-203ENST00000449575 KMT5AQ9NQR1 393 aa10.82□□□□□ -0.68
CCDC171-203ENST00000449575 ARHGAP28Q9P2N2 729 aa10.82□□□□□ -0.68
CCDC171-203ENST00000449575 KCNG1Q9UIX4 513 aa10.82□□□□□ -0.68
CCDC171-203ENST00000449575 REV3LO60673 3130 aa10.82□□□□□ -0.68
CCDC171-203ENST00000449575 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.82□□□□□ -0.68
CCDC171-203ENST00000449575 TBCAO75347 108 aaKnown RBP10.82□□□□□ -0.68
CCDC171-203ENST00000449575 IBSPP21815 317 aaPredicted RBP10.82□□□□□ -0.68
CCDC171-203ENST00000449575 HOXA11P31270 313 aaPredicted RBP10.82□□□□□ -0.68
CCDC171-203ENST00000449575 PHKA2P46019 1235 aa10.82□□□□□ -0.68
CCDC171-203ENST00000449575 PPIGQ13427 754 aaKnown RBP eCLIP10.82□□□□□ -0.68
CCDC171-203ENST00000449575 CAMK4Q16566 473 aa10.82□□□□□ -0.68
CCDC171-203ENST00000449575 IFNLR1Q8IU57 520 aaPredicted RBP10.82□□□□□ -0.68
CCDC171-203ENST00000449575 DEPTORQ8TB45 409 aa10.82□□□□□ -0.68
CCDC171-203ENST00000449575 FAM200AQ8TCP9 573 aa10.82□□□□□ -0.68
CCDC171-203ENST00000449575 C16orf45Q96MC5 204 aaPredicted RBP10.82□□□□□ -0.68
CCDC171-203ENST00000449575 RPLP2P05387 115 aaKnown RBP10.81□□□□□ -0.68
CCDC171-203ENST00000449575 DEFB103AP81534 67 aa10.81□□□□□ -0.68
CCDC171-203ENST00000449575 DPYDQ12882 1025 aa10.81□□□□□ -0.68
CCDC171-203ENST00000449575 TFDP1Q14186 410 aa10.81□□□□□ -0.68
CCDC171-203ENST00000449575 BMS1Q14692 1282 aaKnown RBP10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms