RNA–Protein interactions for RNA: ENST00000449476.6

CTC1-202, Transcript of CST telomere replication complex component 1, humanhuman

TSL 2

Gene CTC1, Length 4,797 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-202ENST00000449476 TLK1Q9UKI8 766 aa11.11□□□□□ -0.63
CTC1-202ENST00000449476 AGO2Q9UKV8 859 aaKnown RBP11.11□□□□□ -0.63
CTC1-202ENST00000449476 MAPK13O15264 365 aa11.11□□□□□ -0.63
CTC1-202ENST00000449476 BRAFP15056 766 aa11.11□□□□□ -0.63
CTC1-202ENST00000449476 RPA1P27694 616 aa11.11□□□□□ -0.63
CTC1-202ENST00000449476 DHX34Q14147 1143 aaKnown RBP11.11□□□□□ -0.63
CTC1-202ENST00000449476 VPS72Q15906 364 aa11.11□□□□□ -0.63
CTC1-202ENST00000449476 DBN1Q16643 649 aa11.11□□□□□ -0.63
CTC1-202ENST00000449476 MMEL1Q495T6 779 aa11.11□□□□□ -0.63
CTC1-202ENST00000449476 ZNF668Q96K58 619 aaPredicted RBP11.11□□□□□ -0.63
CTC1-202ENST00000449476 ACAD9Q9H845 621 aa11.11□□□□□ -0.63
CTC1-202ENST00000449476 PCSK1NQ9UHG2 260 aa11.11□□□□□ -0.63
CTC1-202ENST00000449476 TFR2Q9UP52 801 aa11.11□□□□□ -0.63
CTC1-202ENST00000449476 AK9Q5TCS8 1911 aa11.11□□□□□ -0.63
CTC1-202ENST00000449476 NEURL4Q96JN8 1562 aa11.11□□□□□ -0.63
CTC1-202ENST00000449476 A0A1W2PQJ5 194 aa11.11□□□□□ -0.63
CTC1-202ENST00000449476 GOLGA8MH3BSY2 632 aa11.11□□□□□ -0.63
CTC1-202ENST00000449476 OPHN1O60890 802 aa11.11□□□□□ -0.63
CTC1-202ENST00000449476 GCKP35557 465 aa11.11□□□□□ -0.63
CTC1-202ENST00000449476 E2F4Q16254 413 aa11.11□□□□□ -0.63
CTC1-202ENST00000449476 MCUQ8NE86 351 aa11.11□□□□□ -0.63
CTC1-202ENST00000449476 SMARCAL1Q9NZC9 954 aa11.11□□□□□ -0.63
CTC1-202ENST00000449476 IPO11Q9UI26 975 aaKnown RBP11.11□□□□□ -0.63
CTC1-202ENST00000449476 PPLO60437 1756 aa11.11□□□□□ -0.63
CTC1-202ENST00000449476 ENTPD3O75355 529 aa11.11□□□□□ -0.63
CTC1-202ENST00000449476 SCP2P22307 547 aa11.11□□□□□ -0.63
CTC1-202ENST00000449476 ANXA13P27216 316 aa11.11□□□□□ -0.63
CTC1-202ENST00000449476 LMBRD2Q68DH5 695 aaPredicted RBP11.11□□□□□ -0.63
CTC1-202ENST00000449476 METTL23Q86XA0 190 aa11.11□□□□□ -0.63
CTC1-202ENST00000449476 DAGLBQ8NCG7 672 aa11.11□□□□□ -0.63
CTC1-202ENST00000449476 RIN2Q8WYP3 895 aaPredicted RBP11.11□□□□□ -0.63
CTC1-202ENST00000449476 TTC17Q96AE7 1141 aa11.11□□□□□ -0.63
CTC1-202ENST00000449476 RBM12Q9NTZ6 932 aaKnown RBP11.11□□□□□ -0.63
CTC1-202ENST00000449476 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.11□□□□□ -0.63
CTC1-202ENST00000449476 HEY1Q9Y5J3 304 aa11.11□□□□□ -0.63
CTC1-202ENST00000449476 VWDEQ8N2E2 1590 aa11.1□□□□□ -0.63
CTC1-202ENST00000449476 RTN2O75298 545 aa11.1□□□□□ -0.63
CTC1-202ENST00000449476 LUC7L3O95232 432 aaKnown RBP11.1□□□□□ -0.63
CTC1-202ENST00000449476 ESRRAP11474 423 aaPredicted RBP11.1□□□□□ -0.63
CTC1-202ENST00000449476 NAB2Q15742 525 aa11.1□□□□□ -0.63
CTC1-202ENST00000449476 TRIM72Q6ZMU5 477 aa11.1□□□□□ -0.63
CTC1-202ENST00000449476 NLRP14Q86W24 1093 aa11.1□□□□□ -0.63
CTC1-202ENST00000449476 DCLK2Q8N568 766 aa11.1□□□□□ -0.63
CTC1-202ENST00000449476 SLC35G2Q8TBE7 412 aa11.1□□□□□ -0.63
CTC1-202ENST00000449476 KLC2Q9H0B6 622 aa11.1□□□□□ -0.63
CTC1-202ENST00000449476 HSPBP1Q9NZL4 362 aa11.1□□□□□ -0.63
CTC1-202ENST00000449476 ZC2HC1CQ53FD0 456 aaPredicted RBP11.1□□□□□ -0.63
CTC1-202ENST00000449476 EPM2AIP1Q7L775 607 aaPredicted RBP11.1□□□□□ -0.63
CTC1-202ENST00000449476 RHPN2Q8IUC4 686 aa11.1□□□□□ -0.63
CTC1-202ENST00000449476 RUBCNQ92622 972 aa11.1□□□□□ -0.63
CTC1-202ENST00000449476 HDAC11Q96DB2 347 aa11.1□□□□□ -0.63
CTC1-202ENST00000449476 RPAP3Q9H6T3 665 aaPredicted RBP11.1□□□□□ -0.63
CTC1-202ENST00000449476 ASNSD1Q9NWL6 643 aa11.1□□□□□ -0.63
CTC1-202ENST00000449476 PLAGL2Q9UPG8 496 aa11.1□□□□□ -0.63
CTC1-202ENST00000449476 PITPNM2Q9BZ72 1349 aa11.1□□□□□ -0.63
CTC1-202ENST00000449476 CNTNAP4Q9C0A0 1308 aa11.1□□□□□ -0.63
CTC1-202ENST00000449476 DEPDC5O75140 1603 aa11.1□□□□□ -0.63
CTC1-202ENST00000449476 ADGRB2O60241 1585 aa11.1□□□□□ -0.63
CTC1-202ENST00000449476 PXDNQ92626 1479 aa11.1□□□□□ -0.63
CTC1-202ENST00000449476 KDM6AO15550 1401 aaPredicted RBP11.1□□□□□ -0.63
CTC1-202ENST00000449476 PFDN6O15212 129 aa11.1□□□□□ -0.63
CTC1-202ENST00000449476 TTI1O43156 1089 aa11.1□□□□□ -0.63
CTC1-202ENST00000449476 GGPS1O95749 300 aa11.1□□□□□ -0.63
CTC1-202ENST00000449476 KLRC1P26715 233 aa11.1□□□□□ -0.63
CTC1-202ENST00000449476 PHKA2P46019 1235 aa11.1□□□□□ -0.63
CTC1-202ENST00000449476 GPC3P51654 580 aa11.1□□□□□ -0.63
CTC1-202ENST00000449476 PSMC1P62191 440 aaKnown RBP11.1□□□□□ -0.63
CTC1-202ENST00000449476 GUCY1A3Q02108 690 aa11.1□□□□□ -0.63
CTC1-202ENST00000449476 NR1H3Q13133 447 aa11.1□□□□□ -0.63
CTC1-202ENST00000449476 BZW1Q7L1Q6 419 aaKnown RBP11.1□□□□□ -0.63
CTC1-202ENST00000449476 SH2D3CQ8N5H7 860 aa11.1□□□□□ -0.63
CTC1-202ENST00000449476 SLC10A4Q96EP9 437 aa11.1□□□□□ -0.63
CTC1-202ENST00000449476 TTC25Q96NG3 672 aa11.1□□□□□ -0.63
CTC1-202ENST00000449476 TUBB6Q9BUF5 446 aa11.1□□□□□ -0.63
CTC1-202ENST00000449476 IP6K2Q9UHH9 426 aa11.1□□□□□ -0.63
CTC1-202ENST00000449476 TMEM131LA2VDJ0 1609 aa11.1□□□□□ -0.63
CTC1-202ENST00000449476 SLIT1O75093 1534 aa11.1□□□□□ -0.63
CTC1-202ENST00000449476 FRMD3A2A2Y4 597 aa11.09□□□□□ -0.63
CTC1-202ENST00000449476 GPS1Q13098 491 aa11.09□□□□□ -0.63
CTC1-202ENST00000449476 NCAPHQ15003 741 aa11.09□□□□□ -0.63
CTC1-202ENST00000449476 HP1BP3Q5SSJ5 553 aaPredicted RBP11.09□□□□□ -0.63
CTC1-202ENST00000449476 DEPDC1BQ8WUY9 529 aa11.09□□□□□ -0.63
CTC1-202ENST00000449476 MAML1Q92585 1016 aa11.09□□□□□ -0.63
CTC1-202ENST00000449476 MRPL4Q9BYD3 311 aaKnown RBP11.09□□□□□ -0.63
CTC1-202ENST00000449476 SLC9A2Q9UBY0 812 aa11.09□□□□□ -0.63
CTC1-202ENST00000449476 SLC26A4O43511 780 aa11.09□□□□□ -0.63
CTC1-202ENST00000449476 MYBL1P10243 752 aa11.09□□□□□ -0.63
CTC1-202ENST00000449476 ERVK-24P63145 666 aa11.09□□□□□ -0.63
CTC1-202ENST00000449476 NFX1Q12986 1120 aaKnown RBP11.09□□□□□ -0.63
CTC1-202ENST00000449476 MKRN3Q13064 507 aaKnown RBP11.09□□□□□ -0.63
CTC1-202ENST00000449476 FBXL16Q8N461 479 aa11.09□□□□□ -0.63
CTC1-202ENST00000449476 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.09□□□□□ -0.63
CTC1-202ENST00000449476 A0A0G2JND7 137 aa11.09□□□□□ -0.63
CTC1-202ENST00000449476 SPDYE16A6NNV3 312 aaPredicted RBP11.09□□□□□ -0.63
CTC1-202ENST00000449476 COPEO14579 308 aa11.09□□□□□ -0.63
CTC1-202ENST00000449476 SLC37A4O43826 429 aa11.09□□□□□ -0.63
CTC1-202ENST00000449476 PPP1R37O75864 691 aa11.09□□□□□ -0.63
CTC1-202ENST00000449476 KRT14P02533 472 aa11.09□□□□□ -0.63
CTC1-202ENST00000449476 KRT7P08729 469 aa11.09□□□□□ -0.63
CTC1-202ENST00000449476 ZSCAN20P17040 1043 aaPredicted RBP11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms