RNA–Protein interactions for RNA: ENST00000448416.6

SYNPO2-204, Transcript of synaptopodin 2, humanhuman

TSL 2 BASIC

Gene SYNPO2, Length 4,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-204ENST00000448416 ABCB4P21439 1286 aa10.1□□□□□ -0.79
SYNPO2-204ENST00000448416 TXKP42681 527 aa10.1□□□□□ -0.79
SYNPO2-204ENST00000448416 RTP1P59025 263 aa10.1□□□□□ -0.79
SYNPO2-204ENST00000448416 AP1B1Q10567 949 aa10.1□□□□□ -0.79
SYNPO2-204ENST00000448416 PUM3Q15397 648 aaKnown RBP10.1□□□□□ -0.79
SYNPO2-204ENST00000448416 CLUL1Q15846 466 aa10.1□□□□□ -0.79
SYNPO2-204ENST00000448416 CCDC137Q6PK04 289 aaKnown RBP10.1□□□□□ -0.79
SYNPO2-204ENST00000448416 HEATR3Q7Z4Q2 680 aa10.1□□□□□ -0.79
SYNPO2-204ENST00000448416 CCDC105Q8IYK2 499 aa10.1□□□□□ -0.79
SYNPO2-204ENST00000448416 CTNNBL1Q8WYA6 563 aaPredicted RBP10.1□□□□□ -0.79
SYNPO2-204ENST00000448416 DYDC2Q96IM9 177 aa10.1□□□□□ -0.79
SYNPO2-204ENST00000448416 CEP63Q96MT8 703 aa10.1□□□□□ -0.79
SYNPO2-204ENST00000448416 TBC1D7Q9P0N9 293 aa10.1□□□□□ -0.79
SYNPO2-204ENST00000448416 TBX22Q9Y458 520 aa10.1□□□□□ -0.79
SYNPO2-204ENST00000448416 GMEB1Q9Y692 573 aa10.1□□□□□ -0.79
SYNPO2-204ENST00000448416 ADAMTS7Q9UKP4 1686 aa10.09□□□□□ -0.79
SYNPO2-204ENST00000448416 TTLL1O95922 423 aa10.09□□□□□ -0.79
SYNPO2-204ENST00000448416 FAM69CQ0P6D2 419 aa10.09□□□□□ -0.79
SYNPO2-204ENST00000448416 CERKLQ49MI3 558 aaPredicted RBP10.09□□□□□ -0.79
SYNPO2-204ENST00000448416 TAF1BQ53T94 588 aaPredicted RBP10.09□□□□□ -0.79
SYNPO2-204ENST00000448416 ACSBG2Q5FVE4 666 aa10.09□□□□□ -0.79
SYNPO2-204ENST00000448416 AADACL2Q6P093 401 aa10.09□□□□□ -0.79
SYNPO2-204ENST00000448416 CFAP61Q8NHU2 1237 aa10.09□□□□□ -0.79
SYNPO2-204ENST00000448416 HAPLN3Q96S86 360 aa10.09□□□□□ -0.79
SYNPO2-204ENST00000448416 ETNK2Q9NVF9 386 aa10.09□□□□□ -0.79
SYNPO2-204ENST00000448416 STK17AQ9UEE5 414 aa10.09□□□□□ -0.79
SYNPO2-204ENST00000448416 ZFP69BQ9UJL9 534 aa10.09□□□□□ -0.79
SYNPO2-204ENST00000448416 SCN11AQ9UI33 1791 aa10.09□□□□□ -0.79
SYNPO2-204ENST00000448416 SNAP23O00161 211 aa10.09□□□□□ -0.79
SYNPO2-204ENST00000448416 TRAFD1O14545 582 aaPredicted RBP10.09□□□□□ -0.79
SYNPO2-204ENST00000448416 PSMG1O95456 288 aa10.09□□□□□ -0.79
SYNPO2-204ENST00000448416 INHBCP55103 352 aa10.09□□□□□ -0.79
SYNPO2-204ENST00000448416 GRB10Q13322 594 aa10.09□□□□□ -0.79
SYNPO2-204ENST00000448416 ASCC2Q9H1I8 757 aaPredicted RBP10.09□□□□□ -0.79
SYNPO2-204ENST00000448416 ARPP21Q9UBL0 812 aaPredicted RBP10.09□□□□□ -0.79
SYNPO2-204ENST00000448416 CHMP2BQ9UQN3 213 aa10.09□□□□□ -0.79
SYNPO2-204ENST00000448416 A0A1W2PRG0 241 aa10.09□□□□□ -0.79
SYNPO2-204ENST00000448416 DDX3XO00571 662 aaKnown RBP eCLIP10.09□□□□□ -0.79
SYNPO2-204ENST00000448416 SLC5A1P13866 664 aa10.09□□□□□ -0.79
SYNPO2-204ENST00000448416 TMEM62Q0P6H9 643 aa10.09□□□□□ -0.79
SYNPO2-204ENST00000448416 ZCWPW2Q504Y3 356 aa10.09□□□□□ -0.79
SYNPO2-204ENST00000448416 FAM47AQ5JRC9 791 aa10.09□□□□□ -0.79
SYNPO2-204ENST00000448416 ZBTB38Q8NAP3 1195 aaPredicted RBP10.09□□□□□ -0.79
SYNPO2-204ENST00000448416 PLA2G12BQ9BX93 195 aa10.09□□□□□ -0.79
SYNPO2-204ENST00000448416 PHACTR1Q9C0D0 580 aa10.09□□□□□ -0.79
SYNPO2-204ENST00000448416 METTL14Q9HCE5 456 aaKnown RBP10.09□□□□□ -0.79
SYNPO2-204ENST00000448416 MAGEB6P1A0A0J9YX57 407 aa10.08□□□□□ -0.8
SYNPO2-204ENST00000448416 PALM3A6NDB9 673 aaPredicted RBP10.08□□□□□ -0.8
SYNPO2-204ENST00000448416 M0R2N6 131 aa10.08□□□□□ -0.8
SYNPO2-204ENST00000448416 PRKCIP41743 596 aa10.08□□□□□ -0.8
SYNPO2-204ENST00000448416 EXOC3L4Q17RC7 722 aa10.08□□□□□ -0.8
SYNPO2-204ENST00000448416 EPM2AIP1Q7L775 607 aaPredicted RBP10.08□□□□□ -0.8
SYNPO2-204ENST00000448416 RNF168Q8IYW5 571 aaPredicted RBP10.08□□□□□ -0.8
SYNPO2-204ENST00000448416 PRELID2Q8N945 189 aa10.08□□□□□ -0.8
SYNPO2-204ENST00000448416 STKLD1Q8NE28 680 aa10.08□□□□□ -0.8
SYNPO2-204ENST00000448416 ART4Q93070 314 aa10.08□□□□□ -0.8
SYNPO2-204ENST00000448416 MCUR1Q96AQ8 359 aa10.08□□□□□ -0.8
SYNPO2-204ENST00000448416 OLFM3Q96PB7 478 aa10.08□□□□□ -0.8
SYNPO2-204ENST00000448416 TUBGCP5Q96RT8 1024 aa10.08□□□□□ -0.8
SYNPO2-204ENST00000448416 SLCO1B3Q9NPD5 702 aa10.08□□□□□ -0.8
SYNPO2-204ENST00000448416 ANKRD63C9JTQ0 380 aa10.08□□□□□ -0.8
SYNPO2-204ENST00000448416 SPATA31D3P0C874 917 aa10.08□□□□□ -0.8
SYNPO2-204ENST00000448416 WDR72Q3MJ13 1102 aa10.08□□□□□ -0.8
SYNPO2-204ENST00000448416 SPATA31D4Q6ZUB0 917 aa10.08□□□□□ -0.8
SYNPO2-204ENST00000448416 SMC1BQ8NDV3 1235 aa10.08□□□□□ -0.8
SYNPO2-204ENST00000448416 RBM46Q8TBY0 533 aaKnown RBP10.08□□□□□ -0.8
SYNPO2-204ENST00000448416 RFFLQ8WZ73 363 aa10.08□□□□□ -0.8
SYNPO2-204ENST00000448416 LZICQ8WZA0 190 aa10.08□□□□□ -0.8
SYNPO2-204ENST00000448416 ALG3Q92685 438 aa10.08□□□□□ -0.8
SYNPO2-204ENST00000448416 CADM1Q9BY67 442 aaKnown RBP10.08□□□□□ -0.8
SYNPO2-204ENST00000448416 SYNCQ9H7C4 482 aa10.08□□□□□ -0.8
SYNPO2-204ENST00000448416 TLE6Q9H808 572 aa10.08□□□□□ -0.8
SYNPO2-204ENST00000448416 PCYOX1Q9UHG3 505 aa10.08□□□□□ -0.8
SYNPO2-204ENST00000448416 BCORQ6W2J9 1755 aa10.08□□□□□ -0.8
SYNPO2-204ENST00000448416 HSPA6P17066 643 aa10.08□□□□□ -0.8
SYNPO2-204ENST00000448416 FAM26FQ5R3K3 315 aa10.08□□□□□ -0.8
SYNPO2-204ENST00000448416 GALNT17Q6IS24 598 aa10.08□□□□□ -0.8
SYNPO2-204ENST00000448416 TTC27Q6P3X3 843 aa10.08□□□□□ -0.8
SYNPO2-204ENST00000448416 CYP4X1Q8N118 509 aa10.08□□□□□ -0.8
SYNPO2-204ENST00000448416 VPS52Q8N1B4 723 aa10.08□□□□□ -0.8
SYNPO2-204ENST00000448416 SPOCK2Q92563 424 aa10.08□□□□□ -0.8
SYNPO2-204ENST00000448416 FAM163AQ96GL9 167 aaPredicted RBP10.08□□□□□ -0.8
SYNPO2-204ENST00000448416 MIPEPQ99797 713 aa10.08□□□□□ -0.8
SYNPO2-204ENST00000448416 STX18Q9P2W9 335 aaKnown RBP10.08□□□□□ -0.8
SYNPO2-204ENST00000448416 KIF1AQ12756 1690 aa10.08□□□□□ -0.8
SYNPO2-204ENST00000448416 CCDC166P0CW27 439 aa10.07□□□□□ -0.8
SYNPO2-204ENST00000448416 ANXA13P27216 316 aa10.07□□□□□ -0.8
SYNPO2-204ENST00000448416 ESCO1Q5FWF5 840 aa10.07□□□□□ -0.8
SYNPO2-204ENST00000448416 FOXR2Q6PJQ5 311 aa10.07□□□□□ -0.8
SYNPO2-204ENST00000448416 CCDC125Q86Z20 511 aa10.07□□□□□ -0.8
SYNPO2-204ENST00000448416 KSR1Q8IVT5 923 aa10.07□□□□□ -0.8
SYNPO2-204ENST00000448416 SCYL3Q8IZE3 742 aa10.07□□□□□ -0.8
SYNPO2-204ENST00000448416 ANKRD35Q8N283 1001 aa10.07□□□□□ -0.8
SYNPO2-204ENST00000448416 WDR66Q8TBY9 1149 aa10.07□□□□□ -0.8
SYNPO2-204ENST00000448416 SH3RF3Q8TEJ3 882 aaPredicted RBP10.07□□□□□ -0.8
SYNPO2-204ENST00000448416 CCDC28BQ9BUN5 200 aa10.07□□□□□ -0.8
SYNPO2-204ENST00000448416 LRRC27Q9C0I9 530 aa10.07□□□□□ -0.8
SYNPO2-204ENST00000448416 DNAJC17Q9NVM6 304 aaKnown RBP10.07□□□□□ -0.8
SYNPO2-204ENST00000448416 ZNF212Q9UDV6 495 aa10.07□□□□□ -0.8
SYNPO2-204ENST00000448416 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms