RNA–Protein interactions for RNA: ENST00000441089.1

PTPN4-206, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-206ENST00000441089 LCE5AQ5TCM9 118 aa5.58□□□□□ -1.52
PTPN4-206ENST00000441089 NAA16Q6N069 864 aaPredicted RBP5.58□□□□□ -1.52
PTPN4-206ENST00000441089 PHLDB3Q6NSJ2 640 aa5.58□□□□□ -1.52
PTPN4-206ENST00000441089 ZSCAN25Q6NSZ9 544 aa5.58□□□□□ -1.52
PTPN4-206ENST00000441089 TATDN1Q6P1N9 297 aa5.58□□□□□ -1.52
PTPN4-206ENST00000441089 CNKSR3Q6P9H4 555 aa5.58□□□□□ -1.52
PTPN4-206ENST00000441089 UBALD2Q8IYN6 164 aa5.58□□□□□ -1.52
PTPN4-206ENST00000441089 TMEM105Q8N8V8 129 aa5.58□□□□□ -1.52
PTPN4-206ENST00000441089 MIGA1Q8NAN2 632 aa5.58□□□□□ -1.52
PTPN4-206ENST00000441089 TTC16Q8NEE8 873 aa5.58□□□□□ -1.52
PTPN4-206ENST00000441089 PMEPA1Q969W9 287 aa5.58□□□□□ -1.52
PTPN4-206ENST00000441089 ATG4CQ96DT6 458 aa5.58□□□□□ -1.52
PTPN4-206ENST00000441089 IL17RAQ96F46 866 aa5.58□□□□□ -1.52
PTPN4-206ENST00000441089 DSCC1Q9BVC3 393 aa5.58□□□□□ -1.52
PTPN4-206ENST00000441089 PHF7Q9BWX1 381 aaPredicted RBP5.58□□□□□ -1.52
PTPN4-206ENST00000441089 LMAN2LQ9H0V9 348 aa5.58□□□□□ -1.52
PTPN4-206ENST00000441089 CHRDQ9H2X0 955 aa5.58□□□□□ -1.52
PTPN4-206ENST00000441089 ARMT1Q9H993 441 aa5.58□□□□□ -1.52
PTPN4-206ENST00000441089 EPB41L4AQ9HCS5 686 aaPredicted RBP5.58□□□□□ -1.52
PTPN4-206ENST00000441089 TRMT13Q9NUP7 481 aaKnown RBP5.58□□□□□ -1.52
PTPN4-206ENST00000441089 RBM8AQ9Y5S9 174 aaKnown RBP5.58□□□□□ -1.52
PTPN4-206ENST00000441089 NAV1Q8NEY1 1877 aa5.58□□□□□ -1.52
PTPN4-206ENST00000441089 RALGAPA1Q6GYQ0 2036 aa5.57□□□□□ -1.52
PTPN4-206ENST00000441089 FLT1P17948 1338 aa5.57□□□□□ -1.52
PTPN4-206ENST00000441089 DNAJC25-GNG10A0A024R161 153 aa5.57□□□□□ -1.52
PTPN4-206ENST00000441089 DBX1A6NMT0 343 aa5.57□□□□□ -1.52
PTPN4-206ENST00000441089 GSG1L2A8MUP6 293 aa5.57□□□□□ -1.52
PTPN4-206ENST00000441089 PDE2AO00408 941 aaPredicted RBP5.57□□□□□ -1.52
PTPN4-206ENST00000441089 SLC27A2O14975 620 aa5.57□□□□□ -1.52
PTPN4-206ENST00000441089 TBX10O75333 385 aa5.57□□□□□ -1.52
PTPN4-206ENST00000441089 PDGFBP01127 241 aaPredicted RBP5.57□□□□□ -1.52
PTPN4-206ENST00000441089 CTSBP07858 339 aa5.57□□□□□ -1.52
PTPN4-206ENST00000441089 CES1P23141 567 aa5.57□□□□□ -1.52
PTPN4-206ENST00000441089 NDUFV1P49821 464 aa5.57□□□□□ -1.52
PTPN4-206ENST00000441089 DEFB103AP81534 67 aa5.57□□□□□ -1.52
PTPN4-206ENST00000441089 DLX2Q07687 328 aaPredicted RBP5.57□□□□□ -1.52
PTPN4-206ENST00000441089 EHHADHQ08426 723 aa5.57□□□□□ -1.52
PTPN4-206ENST00000441089 C19orf57Q0VDD7 668 aa5.57□□□□□ -1.52
PTPN4-206ENST00000441089 HYAL1Q12794 435 aa5.57□□□□□ -1.52
PTPN4-206ENST00000441089 MTMR3Q13615 1198 aa5.57□□□□□ -1.52
PTPN4-206ENST00000441089 IKBKEQ14164 716 aa5.57□□□□□ -1.52
PTPN4-206ENST00000441089 TMEM132BQ14DG7 1078 aa5.57□□□□□ -1.52
PTPN4-206ENST00000441089 CPSF6Q16630 551 aaKnown RBP eCLIP5.57□□□□□ -1.52
PTPN4-206ENST00000441089 ADCK5Q3MIX3 580 aa5.57□□□□□ -1.52
PTPN4-206ENST00000441089 CREB3L3Q68CJ9 461 aa5.57□□□□□ -1.52
PTPN4-206ENST00000441089 STOX1Q6ZVD7 989 aa5.57□□□□□ -1.52
PTPN4-206ENST00000441089 ZNF765Q7L2R6 523 aa5.57□□□□□ -1.52
PTPN4-206ENST00000441089 TMCO2Q7Z6W1 182 aaPredicted RBP5.57□□□□□ -1.52
PTPN4-206ENST00000441089 TLK2Q86UE8 772 aa5.57□□□□□ -1.52
PTPN4-206ENST00000441089 CILP2Q8IUL8 1156 aa5.57□□□□□ -1.52
PTPN4-206ENST00000441089 MAPKAPK5Q8IW41 473 aa5.57□□□□□ -1.52
PTPN4-206ENST00000441089 SMRP1Q8NCR6 262 aa5.57□□□□□ -1.52
PTPN4-206ENST00000441089 CAGE1Q8TC20 777 aa5.57□□□□□ -1.52
PTPN4-206ENST00000441089 AFAP1L1Q8TED9 768 aa5.57□□□□□ -1.52
PTPN4-206ENST00000441089 SH3RF3Q8TEJ3 882 aaPredicted RBP5.57□□□□□ -1.52
PTPN4-206ENST00000441089 TGFBRAP1Q8WUH2 860 aa5.57□□□□□ -1.52
PTPN4-206ENST00000441089 EZH1Q92800 747 aaPredicted RBP5.57□□□□□ -1.52
PTPN4-206ENST00000441089 EHD4Q9H223 541 aa5.57□□□□□ -1.52
PTPN4-206ENST00000441089 MFSD1Q9H3U5 465 aa5.57□□□□□ -1.52
PTPN4-206ENST00000441089 SH2D4AQ9H788 454 aa5.57□□□□□ -1.52
PTPN4-206ENST00000441089 AATFQ9NY61 560 aaKnown RBP eCLIP5.57□□□□□ -1.52
PTPN4-206ENST00000441089 SERPINB13Q9UIV8 391 aa5.57□□□□□ -1.52
PTPN4-206ENST00000441089 POLIQ9UNA4 740 aa5.57□□□□□ -1.52
PTPN4-206ENST00000441089 Q9Y3F1 56 aa5.57□□□□□ -1.52
PTPN4-206ENST00000441089 PCDHGC5Q9Y5F6 944 aa5.57□□□□□ -1.52
PTPN4-206ENST00000441089 SNX14Q9Y5W7 946 aa5.57□□□□□ -1.52
PTPN4-206ENST00000441089 PRR5-ARHGAP8B1AHC4 643 aa5.56□□□□□ -1.52
PTPN4-206ENST00000441089 PATL2C9JE40 543 aaKnown RBP5.56□□□□□ -1.52
PTPN4-206ENST00000441089 WDR46O15213 610 aaKnown RBP5.56□□□□□ -1.52
PTPN4-206ENST00000441089 IGSF3O75054 1194 aa5.56□□□□□ -1.52
PTPN4-206ENST00000441089 FGAP02671 866 aa5.56□□□□□ -1.52
PTPN4-206ENST00000441089 RB1P06400 928 aa5.56□□□□□ -1.52
PTPN4-206ENST00000441089 CYP21A2P08686 494 aa5.56□□□□□ -1.52
PTPN4-206ENST00000441089 ATF7P17544 494 aaPredicted RBP5.56□□□□□ -1.52
PTPN4-206ENST00000441089 PSMC6P62333 389 aa5.56□□□□□ -1.52
PTPN4-206ENST00000441089 HTRA4P83105 476 aaPredicted RBP5.56□□□□□ -1.52
PTPN4-206ENST00000441089 ARHGAP8P85298 464 aa5.56□□□□□ -1.52
PTPN4-206ENST00000441089 PTPN11Q06124 597 aaPredicted RBP5.56□□□□□ -1.52
PTPN4-206ENST00000441089 ADAM15Q13444 863 aa5.56□□□□□ -1.52
PTPN4-206ENST00000441089 ANGPT1Q15389 498 aa5.56□□□□□ -1.52
PTPN4-206ENST00000441089 FAM47CQ5HY64 1035 aa5.56□□□□□ -1.52
PTPN4-206ENST00000441089 ZC3H14Q6PJT7 736 aaKnown RBP5.56□□□□□ -1.52
PTPN4-206ENST00000441089 PAOXQ6QHF9 649 aa5.56□□□□□ -1.52
PTPN4-206ENST00000441089 ARMCX2Q7L311 632 aa5.56□□□□□ -1.52
PTPN4-206ENST00000441089 TTC6Q86TZ1 520 aa5.56□□□□□ -1.52
PTPN4-206ENST00000441089 TMEM192Q8IY95 271 aa5.56□□□□□ -1.52
PTPN4-206ENST00000441089 IFNL3Q8IZI9 196 aa5.56□□□□□ -1.52
PTPN4-206ENST00000441089 CYP2W1Q8TAV3 490 aa5.56□□□□□ -1.52
PTPN4-206ENST00000441089 SNX29Q8TEQ0 813 aa5.56□□□□□ -1.52
PTPN4-206ENST00000441089 SDR42E1Q8WUS8 393 aa5.56□□□□□ -1.52
PTPN4-206ENST00000441089 BCL7CQ8WUZ0 217 aaPredicted RBP5.56□□□□□ -1.52
PTPN4-206ENST00000441089 MSLNLQ96KJ4 702 aa5.56□□□□□ -1.52
PTPN4-206ENST00000441089 RPGRIP1Q96KN7 1286 aa5.56□□□□□ -1.52
PTPN4-206ENST00000441089 RTKNQ9BST9 563 aa5.56□□□□□ -1.52
PTPN4-206ENST00000441089 TEX13BQ9BXU2 312 aa5.56□□□□□ -1.52
PTPN4-206ENST00000441089 NRSN2Q9GZP1 204 aa5.56□□□□□ -1.52
PTPN4-206ENST00000441089 UPF2Q9HAU5 1272 aaKnown RBP5.56□□□□□ -1.52
PTPN4-206ENST00000441089 LRRC4CQ9HCJ2 640 aa5.56□□□□□ -1.52
PTPN4-206ENST00000441089 ADAMTS5Q9UNA0 930 aa5.56□□□□□ -1.52
PTPN4-206ENST00000441089 GNEQ9Y223 722 aaKnown RBP5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms