RNA–Protein interactions for RNA: ENST00000440400.1

ACTN4-204, Transcript of actinin alpha 4, humanhuman

TSL 5

Gene ACTN4, Length 3,180 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-204ENST00000440400 DONSONQ9NYP3 566 aa14.34□□□□□ -0.11
ACTN4-204ENST00000440400 PNMA3Q9UL41 463 aa14.34□□□□□ -0.11
ACTN4-204ENST00000440400 ANO9A1A5B4 782 aa14.34□□□□□ -0.11
ACTN4-204ENST00000440400 PEX10O60683 326 aa14.34□□□□□ -0.11
ACTN4-204ENST00000440400 POLR2FP61218 127 aaKnown RBP14.34□□□□□ -0.11
ACTN4-204ENST00000440400 ERVK-9P63128 1117 aa14.34□□□□□ -0.11
ACTN4-204ENST00000440400 ADGRA3Q8IWK6 1321 aa14.34□□□□□ -0.11
ACTN4-204ENST00000440400 SLC35F6Q8N357 371 aa14.34□□□□□ -0.11
ACTN4-204ENST00000440400 JAKMIP2Q96AA8 810 aa14.34□□□□□ -0.11
ACTN4-204ENST00000440400 VTI1AQ96AJ9 217 aa14.34□□□□□ -0.11
ACTN4-204ENST00000440400 CCDC42Q96M95 316 aa14.34□□□□□ -0.11
ACTN4-204ENST00000440400 MPHOSPH6Q99547 160 aaKnown RBP14.34□□□□□ -0.11
ACTN4-204ENST00000440400 PORCNQ9H237 461 aa14.34□□□□□ -0.11
ACTN4-204ENST00000440400 AJAP1Q9UKB5 411 aaPredicted RBP14.34□□□□□ -0.11
ACTN4-204ENST00000440400 EFCAB8A8MWE9 144 aa14.33□□□□□ -0.12
ACTN4-204ENST00000440400 GARTP22102 1010 aa14.33□□□□□ -0.12
ACTN4-204ENST00000440400 MNAT1P51948 309 aa14.33□□□□□ -0.12
ACTN4-204ENST00000440400 DMP1Q13316 513 aaPredicted RBP14.33□□□□□ -0.12
ACTN4-204ENST00000440400 ZNF792Q3KQV3 632 aa14.33□□□□□ -0.12
ACTN4-204ENST00000440400 SLC9C1Q4G0N8 1177 aa14.33□□□□□ -0.12
ACTN4-204ENST00000440400 C10orf76Q5T2E6 689 aa14.33□□□□□ -0.12
ACTN4-204ENST00000440400 CEP170P1Q96L14 293 aa14.33□□□□□ -0.12
ACTN4-204ENST00000440400 FUT8Q9BYC5 575 aa14.33□□□□□ -0.12
ACTN4-204ENST00000440400 LACRTQ9GZZ8 138 aa14.33□□□□□ -0.12
ACTN4-204ENST00000440400 HSPBP1Q9NZL4 362 aa14.33□□□□□ -0.12
ACTN4-204ENST00000440400 KRT86O43790 486 aa14.33□□□□□ -0.12
ACTN4-204ENST00000440400 IVLP07476 585 aa14.33□□□□□ -0.12
ACTN4-204ENST00000440400 GTF2H1P32780 548 aa14.33□□□□□ -0.12
ACTN4-204ENST00000440400 PEX3P56589 373 aa14.33□□□□□ -0.12
ACTN4-204ENST00000440400 CYFIP1Q7L576 1253 aa14.33□□□□□ -0.12
ACTN4-204ENST00000440400 PLPPR4Q7Z2D5 763 aa14.33□□□□□ -0.12
ACTN4-204ENST00000440400 TRAPPC11Q7Z392 1133 aa14.33□□□□□ -0.12
ACTN4-204ENST00000440400 ZNF572Q7Z3I7 529 aaPredicted RBP14.33□□□□□ -0.12
ACTN4-204ENST00000440400 CACNA2D4Q7Z3S7 1137 aa14.33□□□□□ -0.12
ACTN4-204ENST00000440400 NCAPG2Q86XI2 1143 aa14.33□□□□□ -0.12
ACTN4-204ENST00000440400 FMNL3Q8IVF7 1028 aa14.33□□□□□ -0.12
ACTN4-204ENST00000440400 XXYLT1Q8NBI6 393 aa14.33□□□□□ -0.12
ACTN4-204ENST00000440400 TMC2Q8TDI7 906 aa14.33□□□□□ -0.12
ACTN4-204ENST00000440400 MMP19Q99542 508 aa14.33□□□□□ -0.12
ACTN4-204ENST00000440400 NAPGQ99747 312 aaPredicted RBP14.33□□□□□ -0.12
ACTN4-204ENST00000440400 PARD6BQ9BYG5 372 aa14.33□□□□□ -0.12
ACTN4-204ENST00000440400 COQ4Q9Y3A0 265 aa14.33□□□□□ -0.12
ACTN4-204ENST00000440400 IGKV6-21A0A0C4DH24 114 aa14.32□□□□□ -0.12
ACTN4-204ENST00000440400 KIAA0391O15091 583 aaKnown RBP14.32□□□□□ -0.12
ACTN4-204ENST00000440400 SMTNP53814 917 aa14.32□□□□□ -0.12
ACTN4-204ENST00000440400 SLC18A3Q16572 532 aa14.32□□□□□ -0.12
ACTN4-204ENST00000440400 CBWD6Q4V339 395 aa14.32□□□□□ -0.12
ACTN4-204ENST00000440400 BRDTQ58F21 947 aaPredicted RBP14.32□□□□□ -0.12
ACTN4-204ENST00000440400 CBWD3Q5JTY5 395 aa14.32□□□□□ -0.12
ACTN4-204ENST00000440400 CBWD5Q5RIA9 395 aa14.32□□□□□ -0.12
ACTN4-204ENST00000440400 CELF3Q5SZQ8 465 aaKnown RBP14.32□□□□□ -0.12
ACTN4-204ENST00000440400 FAM102BQ5T8I3 360 aa14.32□□□□□ -0.12
ACTN4-204ENST00000440400 PLEKHO2Q8TD55 490 aa14.32□□□□□ -0.12
ACTN4-204ENST00000440400 EMID1Q96A84 441 aaPredicted RBP14.32□□□□□ -0.12
ACTN4-204ENST00000440400 GCNT4Q9P109 453 aa14.32□□□□□ -0.12
ACTN4-204ENST00000440400 CDC23Q9UJX2 597 aa14.32□□□□□ -0.12
ACTN4-204ENST00000440400 DIS3Q9Y2L1 958 aaKnown RBP14.32□□□□□ -0.12
ACTN4-204ENST00000440400 CTAGE9A4FU28 777 aa14.32□□□□□ -0.12
ACTN4-204ENST00000440400 SLC16A4O15374 487 aa14.32□□□□□ -0.12
ACTN4-204ENST00000440400 CETPP11597 493 aa14.32□□□□□ -0.12
ACTN4-204ENST00000440400 APBA1Q02410 837 aa14.32□□□□□ -0.12
ACTN4-204ENST00000440400 EMC2Q15006 297 aa14.32□□□□□ -0.12
ACTN4-204ENST00000440400 ZNF569Q5MCW4 686 aa14.32□□□□□ -0.12
ACTN4-204ENST00000440400 RNF10Q8N5U6 811 aaKnown RBP14.32□□□□□ -0.12
ACTN4-204ENST00000440400 GPR20Q99678 358 aa14.32□□□□□ -0.12
ACTN4-204ENST00000440400 STK33Q9BYT3 514 aa14.32□□□□□ -0.12
ACTN4-204ENST00000440400 TMEM134Q9H6X4 195 aa14.32□□□□□ -0.12
ACTN4-204ENST00000440400 TRIM10Q9UDY6 481 aa14.32□□□□□ -0.12
ACTN4-204ENST00000440400 ADGRA2Q96PE1 1338 aa14.32□□□□□ -0.12
ACTN4-204ENST00000440400 ACTN1P12814 892 aa14.32□□□□□ -0.12
ACTN4-204ENST00000440400 NAMPTP43490 491 aa14.32□□□□□ -0.12
ACTN4-204ENST00000440400 GTF2A2P52657 109 aa14.32□□□□□ -0.12
ACTN4-204ENST00000440400 TUBB4BP68371 445 aa14.32□□□□□ -0.12
ACTN4-204ENST00000440400 IQCEQ6IPM2 695 aa14.32□□□□□ -0.12
ACTN4-204ENST00000440400 SLC30A5Q8TAD4 765 aa14.32□□□□□ -0.12
ACTN4-204ENST00000440400 CBWD1Q9BRT8 395 aa14.32□□□□□ -0.12
ACTN4-204ENST00000440400 KATNBL1Q9H079 304 aa14.32□□□□□ -0.12
ACTN4-204ENST00000440400 FAN1Q9Y2M0 1017 aa14.32□□□□□ -0.12
ACTN4-204ENST00000440400 ZBTB42B2RXF5 422 aa14.31□□□□□ -0.12
ACTN4-204ENST00000440400 ARIH2O95376 493 aa14.31□□□□□ -0.12
ACTN4-204ENST00000440400 PRLRP16471 622 aa14.31□□□□□ -0.12
ACTN4-204ENST00000440400 ASIC2Q16515 512 aa14.31□□□□□ -0.12
ACTN4-204ENST00000440400 WHAMMP3Q1A5X7 153 aa14.31□□□□□ -0.12
ACTN4-204ENST00000440400 MMS22LQ6ZRQ5 1243 aa14.31□□□□□ -0.12
ACTN4-204ENST00000440400 FAM167AQ96KS9 214 aa14.31□□□□□ -0.12
ACTN4-204ENST00000440400 KMT5AQ9NQR1 393 aa14.31□□□□□ -0.12
ACTN4-204ENST00000440400 SEPT9Q9UHD8 586 aaPredicted RBP14.31□□□□□ -0.12
ACTN4-204ENST00000440400 ANKRD63C9JTQ0 380 aa14.31□□□□□ -0.12
ACTN4-204ENST00000440400 GAS2O43903 313 aaKnown RBP14.31□□□□□ -0.12
ACTN4-204ENST00000440400 MAFO75444 373 aaPredicted RBP14.31□□□□□ -0.12
ACTN4-204ENST00000440400 ZBTB48P10074 688 aaPredicted RBP14.31□□□□□ -0.12
ACTN4-204ENST00000440400 VAMP7P51809 220 aa14.31□□□□□ -0.12
ACTN4-204ENST00000440400 CORO7P57737 925 aa14.31□□□□□ -0.12
ACTN4-204ENST00000440400 LONRF2Q1L5Z9 754 aa14.31□□□□□ -0.12
ACTN4-204ENST00000440400 FAM160B1Q5W0V3 765 aa14.31□□□□□ -0.12
ACTN4-204ENST00000440400 INTS2Q9H0H0 1204 aaKnown RBP14.31□□□□□ -0.12
ACTN4-204ENST00000440400 SUGCTQ9HAC7 445 aa14.31□□□□□ -0.12
ACTN4-204ENST00000440400 F8VZ95 297 aa14.3□□□□□ -0.12
ACTN4-204ENST00000440400 CYP2J2P51589 502 aa14.3□□□□□ -0.12
ACTN4-204ENST00000440400 SPA17Q15506 151 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms