RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 FAM153CQ494X1 144 aa7.15□□□□□ -1.26
CSDE1-205ENST00000438362 TRMT10CQ7L0Y3 403 aaKnown RBP7.15□□□□□ -1.26
CSDE1-205ENST00000438362 CFAP61Q8NHU2 1237 aa7.15□□□□□ -1.26
CSDE1-205ENST00000438362 THOC1Q96FV9 657 aaKnown RBP7.15□□□□□ -1.26
CSDE1-205ENST00000438362 MED15Q96RN5 788 aa7.15□□□□□ -1.26
CSDE1-205ENST00000438362 TGS1Q96RS0 853 aaKnown RBP7.15□□□□□ -1.26
CSDE1-205ENST00000438362 PRMT1Q99873 361 aaKnown RBP7.15□□□□□ -1.26
CSDE1-205ENST00000438362 C11orf70Q9BRQ4 267 aa7.15□□□□□ -1.26
CSDE1-205ENST00000438362 TBC1D22BQ9NU19 505 aa7.15□□□□□ -1.26
CSDE1-205ENST00000438362 UVRAGQ9P2Y5 699 aa7.15□□□□□ -1.26
CSDE1-205ENST00000438362 FAM153AQ9UHL3 310 aa7.15□□□□□ -1.26
CSDE1-205ENST00000438362 BCS1LQ9Y276 419 aa7.15□□□□□ -1.26
CSDE1-205ENST00000438362 H7C0C1 242 aa7.15□□□□□ -1.26
CSDE1-205ENST00000438362 ATP5HO75947 161 aa7.15□□□□□ -1.26
CSDE1-205ENST00000438362 STK10O94804 968 aaKnown RBP7.15□□□□□ -1.26
CSDE1-205ENST00000438362 TJP3O95049 919 aa7.15□□□□□ -1.26
CSDE1-205ENST00000438362 P4HA1P13674 534 aa7.15□□□□□ -1.26
CSDE1-205ENST00000438362 HNRNPH3P31942 346 aaKnown RBP7.15□□□□□ -1.26
CSDE1-205ENST00000438362 ATP5OP48047 213 aa7.15□□□□□ -1.26
CSDE1-205ENST00000438362 CASP4P49662 377 aa7.15□□□□□ -1.26
CSDE1-205ENST00000438362 DYNLT1P63172 113 aa7.15□□□□□ -1.26
CSDE1-205ENST00000438362 SKOR1P84550 965 aa7.15□□□□□ -1.26
CSDE1-205ENST00000438362 BBS9Q3SYG4 887 aa7.15□□□□□ -1.26
CSDE1-205ENST00000438362 CDC42EP5Q6NZY7 148 aa7.15□□□□□ -1.26
CSDE1-205ENST00000438362 SCYL2Q6P3W7 929 aa7.15□□□□□ -1.26
CSDE1-205ENST00000438362 SDCCAG8Q86SQ7 713 aaPredicted RBP7.15□□□□□ -1.26
CSDE1-205ENST00000438362 FBXL13Q8NEE6 735 aa7.15□□□□□ -1.26
CSDE1-205ENST00000438362 PYROXD1Q8WU10 500 aa7.15□□□□□ -1.26
CSDE1-205ENST00000438362 SAAL1Q96ER3 474 aa7.15□□□□□ -1.26
CSDE1-205ENST00000438362 RBM41Q96IZ5 413 aaKnown RBP7.15□□□□□ -1.26
CSDE1-205ENST00000438362 EHD4Q9H223 541 aa7.15□□□□□ -1.26
CSDE1-205ENST00000438362 PABPC3Q9H361 631 aaKnown RBP7.15□□□□□ -1.26
CSDE1-205ENST00000438362 SLC40A1Q9NP59 571 aa7.15□□□□□ -1.26
CSDE1-205ENST00000438362 FER1L4A9Z1Z3 1794 aa7.15□□□□□ -1.27
CSDE1-205ENST00000438362 DENND3A2RUS2 1198 aa7.15□□□□□ -1.27
CSDE1-205ENST00000438362 WDR91A4D1P6 747 aa7.15□□□□□ -1.27
CSDE1-205ENST00000438362 CCT8L1PA6NM43 557 aa7.15□□□□□ -1.27
CSDE1-205ENST00000438362 WDR64B1ANS9 1081 aa7.15□□□□□ -1.27
CSDE1-205ENST00000438362 RSPH10B2B2RC85 870 aa7.15□□□□□ -1.27
CSDE1-205ENST00000438362 TCP11X1B4DZS4 312 aa7.15□□□□□ -1.27
CSDE1-205ENST00000438362 EPHB6O15197 1021 aa7.15□□□□□ -1.27
CSDE1-205ENST00000438362 AKAP3O75969 853 aa7.15□□□□□ -1.27
CSDE1-205ENST00000438362 RSPH10BP0C881 870 aa7.15□□□□□ -1.27
CSDE1-205ENST00000438362 PLS3P13797 630 aa7.15□□□□□ -1.27
CSDE1-205ENST00000438362 COMTP21964 271 aa7.15□□□□□ -1.27
CSDE1-205ENST00000438362 JAK3P52333 1124 aa7.15□□□□□ -1.27
CSDE1-205ENST00000438362 SARNPP82979 210 aaKnown RBP7.15□□□□□ -1.27
CSDE1-205ENST00000438362 GIT2Q14161 759 aa7.15□□□□□ -1.27
CSDE1-205ENST00000438362 MTERF2Q49AM1 385 aa7.15□□□□□ -1.27
CSDE1-205ENST00000438362 MOXD1Q6UVY6 613 aa7.15□□□□□ -1.27
CSDE1-205ENST00000438362 MIGA2Q7L4E1 593 aa7.15□□□□□ -1.27
CSDE1-205ENST00000438362 RFX6Q8HWS3 928 aa7.15□□□□□ -1.27
CSDE1-205ENST00000438362 PDIK1LQ8N165 341 aa7.15□□□□□ -1.27
CSDE1-205ENST00000438362 MDM1Q8TC05 714 aa7.15□□□□□ -1.27
CSDE1-205ENST00000438362 MASTLQ96GX5 879 aa7.15□□□□□ -1.27
CSDE1-205ENST00000438362 SGSM3Q96HU1 749 aa7.15□□□□□ -1.27
CSDE1-205ENST00000438362 CDHR1Q96JP9 859 aa7.15□□□□□ -1.27
CSDE1-205ENST00000438362 POLR3CQ9BUI4 534 aaPredicted RBP7.15□□□□□ -1.27
CSDE1-205ENST00000438362 NRBP2Q9NSY0 501 aa7.15□□□□□ -1.27
CSDE1-205ENST00000438362 KCND2Q9NZV8 630 aa7.15□□□□□ -1.27
CSDE1-205ENST00000438362 ASNSP08243 561 aa7.14□□□□□ -1.27
CSDE1-205ENST00000438362 FGRP09769 529 aa7.14□□□□□ -1.27
CSDE1-205ENST00000438362 COPB2P35606 906 aa7.14□□□□□ -1.27
CSDE1-205ENST00000438362 NPEPPSP55786 919 aa7.14□□□□□ -1.27
CSDE1-205ENST00000438362 BASP1P80723 227 aaKnown RBP7.14□□□□□ -1.27
CSDE1-205ENST00000438362 MKRN3Q13064 507 aaKnown RBP7.14□□□□□ -1.27
CSDE1-205ENST00000438362 MAPK7Q13164 816 aa7.14□□□□□ -1.27
CSDE1-205ENST00000438362 TMEM119Q4V9L6 283 aa7.14□□□□□ -1.27
CSDE1-205ENST00000438362 RINT1Q6NUQ1 792 aa7.14□□□□□ -1.27
CSDE1-205ENST00000438362 ENOSF1Q7L5Y1 443 aa7.14□□□□□ -1.27
CSDE1-205ENST00000438362 KCNK18Q7Z418 384 aa7.14□□□□□ -1.27
CSDE1-205ENST00000438362 PACS2Q86VP3 889 aa7.14□□□□□ -1.27
CSDE1-205ENST00000438362 RHOT1Q8IXI2 618 aa7.14□□□□□ -1.27
CSDE1-205ENST00000438362 C4orf32Q8N8J7 132 aa7.14□□□□□ -1.27
CSDE1-205ENST00000438362 MCPH1Q8NEM0 835 aa7.14□□□□□ -1.27
CSDE1-205ENST00000438362 FBXO41Q8TF61 875 aa7.14□□□□□ -1.27
CSDE1-205ENST00000438362 RAPGEF5Q92565 580 aa7.14□□□□□ -1.27
CSDE1-205ENST00000438362 RNF25Q96BH1 459 aaPredicted RBP7.14□□□□□ -1.27
CSDE1-205ENST00000438362 GRAMD1AQ96CP6 724 aa7.14□□□□□ -1.27
CSDE1-205ENST00000438362 HAUS1Q96CS2 278 aa7.14□□□□□ -1.27
CSDE1-205ENST00000438362 TTC25Q96NG3 672 aa7.14□□□□□ -1.27
CSDE1-205ENST00000438362 CRAMP1Q96RY5 1269 aa7.14□□□□□ -1.27
CSDE1-205ENST00000438362 TUBB6Q9BUF5 446 aa7.14□□□□□ -1.27
CSDE1-205ENST00000438362 MIS12Q9H081 205 aa7.14□□□□□ -1.27
CSDE1-205ENST00000438362 ECT2Q9H8V3 914 aa7.14□□□□□ -1.27
CSDE1-205ENST00000438362 ETNK1Q9HBU6 452 aa7.14□□□□□ -1.27
CSDE1-205ENST00000438362 KIAA1586Q9HCI6 787 aa7.14□□□□□ -1.27
CSDE1-205ENST00000438362 GDF3Q9NR23 364 aa7.14□□□□□ -1.27
CSDE1-205ENST00000438362 DBR1Q9UK59 544 aaKnown RBP7.14□□□□□ -1.27
CSDE1-205ENST00000438362 ARL2BPQ9Y2Y0 163 aa7.14□□□□□ -1.27
CSDE1-205ENST00000438362 USP15Q9Y4E8 981 aaPredicted RBP7.14□□□□□ -1.27
CSDE1-205ENST00000438362 LTN1O94822 1766 aa7.14□□□□□ -1.27
CSDE1-205ENST00000438362 A0A0A6YYK5 440 aaPredicted RBP7.14□□□□□ -1.27
CSDE1-205ENST00000438362 ARHGAP42A6NI28 874 aa7.14□□□□□ -1.27
CSDE1-205ENST00000438362 K7ERI5 159 aa7.14□□□□□ -1.27
CSDE1-205ENST00000438362 MCF2LO15068 1137 aa7.14□□□□□ -1.27
CSDE1-205ENST00000438362 CLDN3O15551 220 aa7.14□□□□□ -1.27
CSDE1-205ENST00000438362 APBA3O96018 575 aa7.14□□□□□ -1.27
CSDE1-205ENST00000438362 SCP2P22307 547 aa7.14□□□□□ -1.27
CSDE1-205ENST00000438362 KCNJ1P48048 391 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 99.8 ms