RNA–Protein interactions for RNA: ENST00000435497.1

LINC00028-201, long intergenic non-protein coding RNA 28, humanhuman

TSL 2 BASIC

Gene LINC00028, Length 587 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00028-201ENST00000435497 KCNK12Q9HB15 430 aa15.25■□□□□ 0.03
LINC00028-201ENST00000435497 AGPAT5Q9NUQ2 364 aa15.25■□□□□ 0.03
LINC00028-201ENST00000435497 PCDHA4Q9UN74 947 aa15.25■□□□□ 0.03
LINC00028-201ENST00000435497 DOCK8Q8NF50 2099 aa15.24■□□□□ 0.03
LINC00028-201ENST00000435497 NRP1O14786 923 aa15.24■□□□□ 0.03
LINC00028-201ENST00000435497 N4BP1O75113 896 aaKnown RBP15.24■□□□□ 0.03
LINC00028-201ENST00000435497 ALDH2P05091 517 aa15.24■□□□□ 0.03
LINC00028-201ENST00000435497 AOC1P19801 751 aa15.24■□□□□ 0.03
LINC00028-201ENST00000435497 PSMC5P62195 406 aa15.24■□□□□ 0.03
LINC00028-201ENST00000435497 CCDC149Q6ZUS6 474 aa15.24■□□□□ 0.03
LINC00028-201ENST00000435497 TAS1R1Q7RTX1 841 aa15.24■□□□□ 0.03
LINC00028-201ENST00000435497 TMEM175Q9BSA9 504 aa15.24■□□□□ 0.03
LINC00028-201ENST00000435497 EMILIN2Q9BXX0 1053 aa15.24■□□□□ 0.03
LINC00028-201ENST00000435497 WRAP73Q9P2S5 460 aaPredicted RBP15.24■□□□□ 0.03
LINC00028-201ENST00000435497 DUSP12Q9UNI6 340 aa15.24■□□□□ 0.03
LINC00028-201ENST00000435497 FAN1Q9Y2M0 1017 aa15.24■□□□□ 0.03
LINC00028-201ENST00000435497 NARSO43776 548 aaKnown RBP15.23■□□□□ 0.03
LINC00028-201ENST00000435497 EFEMP2O95967 443 aa15.23■□□□□ 0.03
LINC00028-201ENST00000435497 LETM2Q2VYF4 491 aa15.23■□□□□ 0.03
LINC00028-201ENST00000435497 MOXD1Q6UVY6 613 aa15.23■□□□□ 0.03
LINC00028-201ENST00000435497 C15orf39Q6ZRI6 1047 aa15.23■□□□□ 0.03
LINC00028-201ENST00000435497 BLIDQ8IZY5 108 aa15.23■□□□□ 0.03
LINC00028-201ENST00000435497 URGCPQ8TCY9 931 aa15.23■□□□□ 0.03
LINC00028-201ENST00000435497 PRPF31Q8WWY3 499 aaKnown RBP15.23■□□□□ 0.03
LINC00028-201ENST00000435497 NKD2Q969F2 451 aaPredicted RBP15.23■□□□□ 0.03
LINC00028-201ENST00000435497 C22orf23Q9BZE7 217 aa15.23■□□□□ 0.03
LINC00028-201ENST00000435497 RSAD1Q9HA92 442 aa15.23■□□□□ 0.03
LINC00028-201ENST00000435497 MARCH5Q9NX47 278 aa15.23■□□□□ 0.03
LINC00028-201ENST00000435497 COL4A3BPQ9Y5P4 624 aa15.23■□□□□ 0.03
LINC00028-201ENST00000435497 DOCK6Q96HP0 2047 aa15.22■□□□□ 0.03
LINC00028-201ENST00000435497 SLC37A4O43826 429 aa15.22■□□□□ 0.03
LINC00028-201ENST00000435497 POMCP01189 267 aa15.22■□□□□ 0.03
LINC00028-201ENST00000435497 SRGAP2CP0DJJ0 459 aa15.22■□□□□ 0.03
LINC00028-201ENST00000435497 TOB2Q14106 344 aaPredicted RBP15.22■□□□□ 0.03
LINC00028-201ENST00000435497 SRGAP1Q7Z6B7 1085 aa15.22■□□□□ 0.03
LINC00028-201ENST00000435497 CCDC105Q8IYK2 499 aa15.22■□□□□ 0.03
LINC00028-201ENST00000435497 SMG8Q8ND04 991 aaKnown RBP15.22■□□□□ 0.03
LINC00028-201ENST00000435497 CMASQ8NFW8 434 aaPredicted RBP15.22■□□□□ 0.03
LINC00028-201ENST00000435497 RSAD2Q8WXG1 361 aa15.22■□□□□ 0.03
LINC00028-201ENST00000435497 TMEM143Q96AN5 459 aa15.22■□□□□ 0.03
LINC00028-201ENST00000435497 AIFM3Q96NN9 605 aa15.22■□□□□ 0.03
LINC00028-201ENST00000435497 JPH2Q9BR39 696 aaPredicted RBP15.22■□□□□ 0.03
LINC00028-201ENST00000435497 RNF39Q9H2S5 420 aa15.22■□□□□ 0.03
LINC00028-201ENST00000435497 DHX33Q9H6R0 707 aaKnown RBP15.22■□□□□ 0.03
LINC00028-201ENST00000435497 MRPL17Q9NRX2 175 aaKnown RBP15.22■□□□□ 0.03
LINC00028-201ENST00000435497 MIOSQ9NXC5 875 aa15.22■□□□□ 0.03
LINC00028-201ENST00000435497 KANSL3Q9P2N6 904 aa15.22■□□□□ 0.03
LINC00028-201ENST00000435497 VAV3Q9UKW4 847 aa15.22■□□□□ 0.03
LINC00028-201ENST00000435497 ZNF292O60281 2723 aa15.21■□□□□ 0.03
LINC00028-201ENST00000435497 CCDC195A0A1B0GUA6 201 aa15.21■□□□□ 0.03
LINC00028-201ENST00000435497 C2CD2LO14523 706 aa15.21■□□□□ 0.03
LINC00028-201ENST00000435497 TEX28O15482 410 aa15.21■□□□□ 0.03
LINC00028-201ENST00000435497 SOD2P04179 222 aa15.21■□□□□ 0.03
LINC00028-201ENST00000435497 NCLP19338 710 aaKnown RBP15.21■□□□□ 0.03
LINC00028-201ENST00000435497 QARSP47897 775 aaKnown RBP15.21■□□□□ 0.03
LINC00028-201ENST00000435497 FOXK2Q01167 660 aa15.21■□□□□ 0.03
LINC00028-201ENST00000435497 SSRP1Q08945 709 aaKnown RBP15.21■□□□□ 0.03
LINC00028-201ENST00000435497 LAMTOR4Q0VGL1 99 aa15.21■□□□□ 0.03
LINC00028-201ENST00000435497 PPP2R5CQ13362 524 aa15.21■□□□□ 0.03
LINC00028-201ENST00000435497 INF2Q27J81 1249 aa15.21■□□□□ 0.03
LINC00028-201ENST00000435497 KIAA0319Q5VV43 1072 aa15.21■□□□□ 0.03
LINC00028-201ENST00000435497 COLGALT2Q8IYK4 626 aa15.21■□□□□ 0.03
LINC00028-201ENST00000435497 RNF168Q8IYW5 571 aaPredicted RBP15.21■□□□□ 0.03
LINC00028-201ENST00000435497 ADSSL1Q8N142 457 aa15.21■□□□□ 0.03
LINC00028-201ENST00000435497 SIX5Q8N196 739 aa15.21■□□□□ 0.03
LINC00028-201ENST00000435497 DTWD2Q8NBA8 298 aa15.21■□□□□ 0.03
LINC00028-201ENST00000435497 DAGLBQ8NCG7 672 aa15.21■□□□□ 0.03
LINC00028-201ENST00000435497 FAM193BQ96PV7 902 aaPredicted RBP15.21■□□□□ 0.03
LINC00028-201ENST00000435497 RPS6KC1Q96S38 1066 aa15.21■□□□□ 0.03
LINC00028-201ENST00000435497 MAN1C1Q9NR34 630 aa15.21■□□□□ 0.03
LINC00028-201ENST00000435497 IGSF9Q9P2J2 1179 aa15.21■□□□□ 0.03
LINC00028-201ENST00000435497 STK39Q9UEW8 545 aa15.21■□□□□ 0.03
LINC00028-201ENST00000435497 DDX25Q9UHL0 483 aaKnown RBP15.21■□□□□ 0.03
LINC00028-201ENST00000435497 CNTNAP2Q9UHC6 1331 aa15.2■□□□□ 0.02
LINC00028-201ENST00000435497 MTCL1Q9Y4B5 1905 aaKnown RBP15.2■□□□□ 0.02
LINC00028-201ENST00000435497 KRBA1A5PL33 1030 aa15.2■□□□□ 0.02
LINC00028-201ENST00000435497 SPDYE4A6NLX3 237 aa15.2■□□□□ 0.02
LINC00028-201ENST00000435497 F8W810 466 aa15.2■□□□□ 0.02
LINC00028-201ENST00000435497 ZBTB39O15060 712 aa15.2■□□□□ 0.02
LINC00028-201ENST00000435497 RFPL2O75678 378 aa15.2■□□□□ 0.02
LINC00028-201ENST00000435497 MYBP10242 640 aa15.2■□□□□ 0.02
LINC00028-201ENST00000435497 AK2P54819 239 aa15.2■□□□□ 0.02
LINC00028-201ENST00000435497 NONOQ15233 471 aaKnown RBP eCLIP15.2■□□□□ 0.02
LINC00028-201ENST00000435497 ANGPT1Q15389 498 aa15.2■□□□□ 0.02
LINC00028-201ENST00000435497 POTEGQ6S5H5 508 aa15.2■□□□□ 0.02
LINC00028-201ENST00000435497 CEP170P1Q96L14 293 aa15.2■□□□□ 0.02
LINC00028-201ENST00000435497 MYADMQ96S97 322 aa15.2■□□□□ 0.02
LINC00028-201ENST00000435497 RTP3Q9BQQ7 232 aa15.2■□□□□ 0.02
LINC00028-201ENST00000435497 LARP6Q9BRS8 491 aaKnown RBP15.2■□□□□ 0.02
LINC00028-201ENST00000435497 HERC2P3Q9BVR0 1158 aa15.2■□□□□ 0.02
LINC00028-201ENST00000435497 EIF2AQ9BY44 585 aaKnown RBP15.2■□□□□ 0.02
LINC00028-201ENST00000435497 RHOBTB2Q9BYZ6 727 aa15.2■□□□□ 0.02
LINC00028-201ENST00000435497 RXFP1Q9HBX9 757 aa15.2■□□□□ 0.02
LINC00028-201ENST00000435497 WDR6Q9NNW5 1121 aaKnown RBP15.2■□□□□ 0.02
LINC00028-201ENST00000435497 KCNMB3Q9NPA1 279 aa15.2■□□□□ 0.02
LINC00028-201ENST00000435497 BMP2KQ9NSY1 1161 aaPredicted RBP15.2■□□□□ 0.02
LINC00028-201ENST00000435497 FBXL21Q9UKT6 434 aa15.2■□□□□ 0.02
LINC00028-201ENST00000435497 PRG3Q9Y2Y8 225 aaPredicted RBP15.2■□□□□ 0.02
LINC00028-201ENST00000435497 CACNA1IQ9P0X4 2223 aa15.2■□□□□ 0.02
LINC00028-201ENST00000435497 INPPL1O15357 1258 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms