RNA–Protein interactions for RNA: ENST00000421459.2

VIM-202, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 753 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-202ENST00000421459 EIF2AQ9BY44 585 aaKnown RBP9.08□□□□□ -0.96
VIM-202ENST00000421459 SLKQ9H2G2 1235 aaPredicted RBP9.08□□□□□ -0.96
VIM-202ENST00000421459 SH3GLB2Q9NR46 395 aa9.08□□□□□ -0.96
VIM-202ENST00000421459 CYP26B1Q9NR63 512 aa9.08□□□□□ -0.96
VIM-202ENST00000421459 MIOSQ9NXC5 875 aa9.08□□□□□ -0.96
VIM-202ENST00000421459 VAV3Q9UKW4 847 aa9.08□□□□□ -0.96
VIM-202ENST00000421459 PRG3Q9Y2Y8 225 aaPredicted RBP9.08□□□□□ -0.96
VIM-202ENST00000421459 COL4A3BPQ9Y5P4 624 aa9.08□□□□□ -0.96
VIM-202ENST00000421459 IRAK3Q9Y616 596 aa9.08□□□□□ -0.96
VIM-202ENST00000421459 ZFHX2Q9C0A1 2572 aaPredicted RBP9.07□□□□□ -0.96
VIM-202ENST00000421459 FAM205CA6NFA0 338 aa9.07□□□□□ -0.96
VIM-202ENST00000421459 SPDYE4A6NLX3 237 aa9.07□□□□□ -0.96
VIM-202ENST00000421459 RFPL2O75678 378 aa9.07□□□□□ -0.96
VIM-202ENST00000421459 ALDH2P05091 517 aa9.07□□□□□ -0.96
VIM-202ENST00000421459 PSMA5P28066 241 aa9.07□□□□□ -0.96
VIM-202ENST00000421459 OR1G1P47890 313 aa9.07□□□□□ -0.96
VIM-202ENST00000421459 QARSP47897 775 aaKnown RBP9.07□□□□□ -0.96
VIM-202ENST00000421459 LAMTOR4Q0VGL1 99 aa9.07□□□□□ -0.96
VIM-202ENST00000421459 CTTNQ14247 550 aaKnown RBP9.07□□□□□ -0.96
VIM-202ENST00000421459 BMS1Q14692 1282 aaKnown RBP9.07□□□□□ -0.96
VIM-202ENST00000421459 NONOQ15233 471 aaKnown RBP eCLIP9.07□□□□□ -0.96
VIM-202ENST00000421459 POTEGQ6S5H5 508 aa9.07□□□□□ -0.96
VIM-202ENST00000421459 RUFY3Q7L099 469 aa9.07□□□□□ -0.96
VIM-202ENST00000421459 MRPL10Q7Z7H8 261 aaKnown RBP9.07□□□□□ -0.96
VIM-202ENST00000421459 HAS1Q92839 578 aa9.07□□□□□ -0.96
VIM-202ENST00000421459 DYDC2Q96IM9 177 aa9.07□□□□□ -0.96
VIM-202ENST00000421459 INO80BQ9C086 356 aaPredicted RBP9.07□□□□□ -0.96
VIM-202ENST00000421459 MFSD1Q9H3U5 465 aa9.07□□□□□ -0.96
VIM-202ENST00000421459 RSAD1Q9HA92 442 aa9.07□□□□□ -0.96
VIM-202ENST00000421459 KCNK12Q9HB15 430 aa9.07□□□□□ -0.96
VIM-202ENST00000421459 ZSWIM6Q9HCJ5 1215 aa9.07□□□□□ -0.96
VIM-202ENST00000421459 AGPAT5Q9NUQ2 364 aa9.07□□□□□ -0.96
VIM-202ENST00000421459 DZANK1Q9NVP4 752 aa9.07□□□□□ -0.96
VIM-202ENST00000421459 MARCH5Q9NX47 278 aa9.07□□□□□ -0.96
VIM-202ENST00000421459 CACNG4Q9UBN1 327 aa9.07□□□□□ -0.96
VIM-202ENST00000421459 FAN1Q9Y2M0 1017 aa9.07□□□□□ -0.96
VIM-202ENST00000421459 HES2Q9Y543 173 aa9.07□□□□□ -0.96
VIM-202ENST00000421459 DCHS1Q96JQ0 3298 aa9.06□□□□□ -0.96
VIM-202ENST00000421459 CCDC195A0A1B0GUA6 201 aa9.06□□□□□ -0.96
VIM-202ENST00000421459 PRR23AA6NEV1 266 aa9.06□□□□□ -0.96
VIM-202ENST00000421459 PROB1E7EW31 1015 aa9.06□□□□□ -0.96
VIM-202ENST00000421459 TEX28O15482 410 aa9.06□□□□□ -0.96
VIM-202ENST00000421459 DEXIO95424 95 aa9.06□□□□□ -0.96
VIM-202ENST00000421459 CFHP08603 1231 aa9.06□□□□□ -0.96
VIM-202ENST00000421459 SKIP12755 728 aa9.06□□□□□ -0.96
VIM-202ENST00000421459 RAB27AP51159 221 aa9.06□□□□□ -0.96
VIM-202ENST00000421459 AK2P54819 239 aa9.06□□□□□ -0.96
VIM-202ENST00000421459 CDC42EP1Q00587 391 aa9.06□□□□□ -0.96
VIM-202ENST00000421459 CYP4A11Q02928 519 aa9.06□□□□□ -0.96
VIM-202ENST00000421459 PPP2R5CQ13362 524 aa9.06□□□□□ -0.96
VIM-202ENST00000421459 NCAPH2Q6IBW4 605 aa9.06□□□□□ -0.96
VIM-202ENST00000421459 PIK3AP1Q6ZUJ8 805 aa9.06□□□□□ -0.96
VIM-202ENST00000421459 CDR2LQ86X02 465 aaPredicted RBP9.06□□□□□ -0.96
VIM-202ENST00000421459 GLYCTKQ8IVS8 523 aa9.06□□□□□ -0.96
VIM-202ENST00000421459 TRIM22Q8IYM9 498 aa9.06□□□□□ -0.96
VIM-202ENST00000421459 SIX5Q8N196 739 aa9.06□□□□□ -0.96
VIM-202ENST00000421459 PLCD3Q8N3E9 789 aa9.06□□□□□ -0.96
VIM-202ENST00000421459 RNF149Q8NC42 400 aa9.06□□□□□ -0.96
VIM-202ENST00000421459 DAGLBQ8NCG7 672 aa9.06□□□□□ -0.96
VIM-202ENST00000421459 URGCPQ8TCY9 931 aa9.06□□□□□ -0.96
VIM-202ENST00000421459 PGBD4Q96DM1 585 aa9.06□□□□□ -0.96
VIM-202ENST00000421459 ZFP42Q96MM3 310 aa9.06□□□□□ -0.96
VIM-202ENST00000421459 FAM193BQ96PV7 902 aaPredicted RBP9.06□□□□□ -0.96
VIM-202ENST00000421459 GAD1Q99259 594 aa9.06□□□□□ -0.96
VIM-202ENST00000421459 APOL6Q9BWW8 343 aa9.06□□□□□ -0.96
VIM-202ENST00000421459 EMILIN2Q9BXX0 1053 aa9.06□□□□□ -0.96
VIM-202ENST00000421459 DHX33Q9H6R0 707 aaKnown RBP9.06□□□□□ -0.96
VIM-202ENST00000421459 SFXN1Q9H9B4 322 aa9.06□□□□□ -0.96
VIM-202ENST00000421459 KCNMB3Q9NPA1 279 aa9.06□□□□□ -0.96
VIM-202ENST00000421459 MAN1C1Q9NR34 630 aa9.06□□□□□ -0.96
VIM-202ENST00000421459 USTQ9Y2C2 406 aa9.06□□□□□ -0.96
VIM-202ENST00000421459 IPPQ9Y573 584 aa9.06□□□□□ -0.96
VIM-202ENST00000421459 FRYLO94915 3013 aa9.06□□□□□ -0.96
VIM-202ENST00000421459 KRBA1A5PL33 1030 aa9.05□□□□□ -0.96
VIM-202ENST00000421459 ARL5CA6NH57 179 aa9.05□□□□□ -0.96
VIM-202ENST00000421459 CPLX1O14810 134 aa9.05□□□□□ -0.96
VIM-202ENST00000421459 B4GALT5O43286 388 aa9.05□□□□□ -0.96
VIM-202ENST00000421459 CCNT1O60563 726 aaKnown RBP9.05□□□□□ -0.96
VIM-202ENST00000421459 TSPAN1O60635 241 aa9.05□□□□□ -0.96
VIM-202ENST00000421459 SOD2P04179 222 aa9.05□□□□□ -0.96
VIM-202ENST00000421459 P4HBP07237 508 aaKnown RBP9.05□□□□□ -0.96
VIM-202ENST00000421459 ITGA4P13612 1032 aa9.05□□□□□ -0.96
VIM-202ENST00000421459 RPL17P18621 184 aaKnown RBP9.05□□□□□ -0.96
VIM-202ENST00000421459 NCLP19338 710 aaKnown RBP9.05□□□□□ -0.96
VIM-202ENST00000421459 AKAP5P24588 427 aa9.05□□□□□ -0.96
VIM-202ENST00000421459 YWHABP31946 246 aaKnown RBP9.05□□□□□ -0.96
VIM-202ENST00000421459 MLH1P40692 756 aa9.05□□□□□ -0.96
VIM-202ENST00000421459 NBL1P41271 181 aa9.05□□□□□ -0.96
VIM-202ENST00000421459 SCNN1GP51170 649 aa9.05□□□□□ -0.96
VIM-202ENST00000421459 SCRN1Q12765 414 aa9.05□□□□□ -0.96
VIM-202ENST00000421459 TDGQ13569 410 aa9.05□□□□□ -0.96
VIM-202ENST00000421459 GIT2Q14161 759 aa9.05□□□□□ -0.96
VIM-202ENST00000421459 EMC2Q15006 297 aa9.05□□□□□ -0.96
VIM-202ENST00000421459 XKR9Q5GH70 373 aa9.05□□□□□ -0.96
VIM-202ENST00000421459 KIAA0319Q5VV43 1072 aa9.05□□□□□ -0.96
VIM-202ENST00000421459 CCDC149Q6ZUS6 474 aa9.05□□□□□ -0.96
VIM-202ENST00000421459 OTOP3Q7RTS5 596 aa9.05□□□□□ -0.96
VIM-202ENST00000421459 KRT25Q7Z3Z0 450 aa9.05□□□□□ -0.96
VIM-202ENST00000421459 SRGAP1Q7Z6B7 1085 aa9.05□□□□□ -0.96
VIM-202ENST00000421459 FERMT3Q86UX7 667 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms