RNA–Protein interactions for RNA: ENST00000421378.2

LINC00271-201, long intergenic non-protein coding RNA 271, humanhuman

TSL 1 (best) BASIC

Gene LINC00271, Length 1,580 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271-201ENST00000421378 ZC2HC1CQ53FD0 456 aaPredicted RBP19.29■□□□□ 0.68
LINC00271-201ENST00000421378 CAVIN1Q6NZI2 390 aaKnown RBP19.29■□□□□ 0.68
LINC00271-201ENST00000421378 PPP4R3CPQ6ZMV5 832 aa19.29■□□□□ 0.68
LINC00271-201ENST00000421378 TAS1R3Q7RTX0 852 aa19.29■□□□□ 0.68
LINC00271-201ENST00000421378 RPUSD2Q8IZ73 545 aaKnown RBP19.29■□□□□ 0.68
LINC00271-201ENST00000421378 ERVK-5Q9HDB9 667 aa19.29■□□□□ 0.68
LINC00271-201ENST00000421378 TBX20Q9UMR3 447 aa19.29■□□□□ 0.68
LINC00271-201ENST00000421378 PCDHB13Q9Y5F0 798 aa19.29■□□□□ 0.68
LINC00271-201ENST00000421378 TSPAN1O60635 241 aa19.28■□□□□ 0.68
LINC00271-201ENST00000421378 NCBP1Q09161 790 aaKnown RBP19.28■□□□□ 0.68
LINC00271-201ENST00000421378 AMHR2Q16671 573 aa19.28■□□□□ 0.68
LINC00271-201ENST00000421378 KIAA0895Q8NCT3 520 aa19.28■□□□□ 0.68
LINC00271-201ENST00000421378 GLIS3Q8NEA6 775 aa19.28■□□□□ 0.68
LINC00271-201ENST00000421378 DBF4BQ8NFT6 615 aa19.28■□□□□ 0.68
LINC00271-201ENST00000421378 SEPT8Q92599 483 aa19.28■□□□□ 0.68
LINC00271-201ENST00000421378 APBB2Q92870 758 aa19.28■□□□□ 0.68
LINC00271-201ENST00000421378 HVCN1Q96D96 273 aa19.28■□□□□ 0.68
LINC00271-201ENST00000421378 STRA6Q9BX79 667 aa19.28■□□□□ 0.68
LINC00271-201ENST00000421378 AGPAT5Q9NUQ2 364 aa19.28■□□□□ 0.68
LINC00271-201ENST00000421378 TMEM63CQ9P1W3 806 aa19.28■□□□□ 0.68
LINC00271-201ENST00000421378 CNTNAP2Q9UHC6 1331 aa19.28■□□□□ 0.68
LINC00271-201ENST00000421378 ACKR2O00590 384 aa19.27■□□□□ 0.68
LINC00271-201ENST00000421378 EIF3DO15371 548 aaKnown RBP eCLIP19.27■□□□□ 0.68
LINC00271-201ENST00000421378 MLLT1Q03111 559 aaPredicted RBP19.27■□□□□ 0.68
LINC00271-201ENST00000421378 PRPF4BQ13523 1007 aaKnown RBP19.27■□□□□ 0.68
LINC00271-201ENST00000421378 MAP4K3Q8IVH8 894 aa19.27■□□□□ 0.68
LINC00271-201ENST00000421378 VWCEQ96DN2 955 aa19.27■□□□□ 0.68
LINC00271-201ENST00000421378 IL23AQ9NPF7 189 aa19.27■□□□□ 0.68
LINC00271-201ENST00000421378 MAN1B1Q9UKM7 699 aa19.27■□□□□ 0.68
LINC00271-201ENST00000421378 PIN4Q9Y237 131 aaKnown RBP19.27■□□□□ 0.68
LINC00271-201ENST00000421378 TET1Q8NFU7 2136 aa19.27■□□□□ 0.68
LINC00271-201ENST00000421378 BIN1O00499 593 aa19.27■□□□□ 0.67
LINC00271-201ENST00000421378 B4GALT5O43286 388 aa19.27■□□□□ 0.67
LINC00271-201ENST00000421378 TMEM132AQ24JP5 1023 aa19.27■□□□□ 0.67
LINC00271-201ENST00000421378 ZNF658Q5TYW1 1059 aaPredicted RBP19.27■□□□□ 0.67
LINC00271-201ENST00000421378 CNKSR3Q6P9H4 555 aa19.27■□□□□ 0.67
LINC00271-201ENST00000421378 EPM2AIP1Q7L775 607 aaPredicted RBP19.27■□□□□ 0.67
LINC00271-201ENST00000421378 FTHL17Q9BXU8 183 aa19.27■□□□□ 0.67
LINC00271-201ENST00000421378 MRPL4Q9BYD3 311 aaKnown RBP19.27■□□□□ 0.67
LINC00271-201ENST00000421378 GDAQ9Y2T3 454 aa19.27■□□□□ 0.67
LINC00271-201ENST00000421378 HNRNPDLO14979 420 aaKnown RBP19.26■□□□□ 0.67
LINC00271-201ENST00000421378 PRPF6O94906 941 aaKnown RBP19.26■□□□□ 0.67
LINC00271-201ENST00000421378 EDN1P05305 212 aa19.26■□□□□ 0.67
LINC00271-201ENST00000421378 ACRP10323 421 aa19.26■□□□□ 0.67
LINC00271-201ENST00000421378 ARF4P18085 180 aaPredicted RBP19.26■□□□□ 0.67
LINC00271-201ENST00000421378 AXLP30530 894 aa19.26■□□□□ 0.67
LINC00271-201ENST00000421378 KCNA1Q09470 495 aa19.26■□□□□ 0.67
LINC00271-201ENST00000421378 L1TD1Q5T7N2 865 aaKnown RBP19.26■□□□□ 0.67
LINC00271-201ENST00000421378 NOTUMQ6P988 496 aa19.26■□□□□ 0.67
LINC00271-201ENST00000421378 RBM43Q6ZSC3 357 aaKnown RBP19.26■□□□□ 0.67
LINC00271-201ENST00000421378 TRIML1Q8N9V2 468 aa19.26■□□□□ 0.67
LINC00271-201ENST00000421378 SCFD1Q8WVM8 642 aa19.26■□□□□ 0.67
LINC00271-201ENST00000421378 BICD1Q96G01 975 aa19.26■□□□□ 0.67
LINC00271-201ENST00000421378 GTPBP4Q9BZE4 634 aaKnown RBP19.26■□□□□ 0.67
LINC00271-201ENST00000421378 TMX1Q9H3N1 280 aa19.26■□□□□ 0.67
LINC00271-201ENST00000421378 UBE4BO95155 1302 aa19.26■□□□□ 0.67
LINC00271-201ENST00000421378 TTLL13PA6NNM8 815 aa19.25■□□□□ 0.67
LINC00271-201ENST00000421378 ZSCAN20P17040 1043 aaPredicted RBP19.25■□□□□ 0.67
LINC00271-201ENST00000421378 HOXA11P31270 313 aaPredicted RBP19.25■□□□□ 0.67
LINC00271-201ENST00000421378 MAGEA10P43363 369 aaPredicted RBP19.25■□□□□ 0.67
LINC00271-201ENST00000421378 ISM2Q6H9L7 571 aa19.25■□□□□ 0.67
LINC00271-201ENST00000421378 FAM43BQ6ZT52 329 aaPredicted RBP19.25■□□□□ 0.67
LINC00271-201ENST00000421378 SMYD4Q8IYR2 804 aaPredicted RBP19.25■□□□□ 0.67
LINC00271-201ENST00000421378 CPB2Q96IY4 423 aa19.25■□□□□ 0.67
LINC00271-201ENST00000421378 ACCSQ96QU6 501 aa19.25■□□□□ 0.67
LINC00271-201ENST00000421378 TMEM206Q9H813 350 aa19.25■□□□□ 0.67
LINC00271-201ENST00000421378 CHST12Q9NRB3 414 aa19.25■□□□□ 0.67
LINC00271-201ENST00000421378 EXOC7Q9UPT5 735 aa19.25■□□□□ 0.67
LINC00271-201ENST00000421378 USP20Q9Y2K6 914 aa19.25■□□□□ 0.67
LINC00271-201ENST00000421378 H0YGN5 161 aa19.24■□□□□ 0.67
LINC00271-201ENST00000421378 KIF20AO95235 890 aa19.24■□□□□ 0.67
LINC00271-201ENST00000421378 MORC3Q14149 939 aa19.24■□□□□ 0.67
LINC00271-201ENST00000421378 BMT2Q1RMZ1 405 aa19.24■□□□□ 0.67
LINC00271-201ENST00000421378 ATF7IP2Q5U623 682 aa19.24■□□□□ 0.67
LINC00271-201ENST00000421378 TWF2Q6IBS0 349 aaKnown RBP19.24■□□□□ 0.67
LINC00271-201ENST00000421378 PSRC1Q6PGN9 363 aaPredicted RBP19.24■□□□□ 0.67
LINC00271-201ENST00000421378 ZPBP2Q6X784 338 aa19.24■□□□□ 0.67
LINC00271-201ENST00000421378 MYOCDQ8IZQ8 938 aa19.24■□□□□ 0.67
LINC00271-201ENST00000421378 SYCP3Q8IZU3 236 aa19.24■□□□□ 0.67
LINC00271-201ENST00000421378 ZNF507Q8TCN5 953 aa19.24■□□□□ 0.67
LINC00271-201ENST00000421378 TARS2Q9BW92 718 aaKnown RBP19.24■□□□□ 0.67
LINC00271-201ENST00000421378 A0A1B0GUA9 196 aa19.23■□□□□ 0.67
LINC00271-201ENST00000421378 ACTN1P12814 892 aa19.23■□□□□ 0.67
LINC00271-201ENST00000421378 LIG4P49917 911 aa19.23■□□□□ 0.67
LINC00271-201ENST00000421378 EPHB4P54760 987 aa19.23■□□□□ 0.67
LINC00271-201ENST00000421378 IKBKEQ14164 716 aa19.23■□□□□ 0.67
LINC00271-201ENST00000421378 TCTN1Q2MV58 587 aa19.23■□□□□ 0.67
LINC00271-201ENST00000421378 C16orf59Q7L2K0 433 aa19.23■□□□□ 0.67
LINC00271-201ENST00000421378 NELFCDQ8IXH7 590 aa19.23■□□□□ 0.67
LINC00271-201ENST00000421378 ACO2Q99798 780 aaKnown RBP19.23■□□□□ 0.67
LINC00271-201ENST00000421378 ADAM2Q99965 735 aa19.23■□□□□ 0.67
LINC00271-201ENST00000421378 MAPK8IP1Q9UQF2 711 aa19.23■□□□□ 0.67
LINC00271-201ENST00000421378 CEP290O15078 2479 aa19.23■□□□□ 0.67
LINC00271-201ENST00000421378 N4BP3O15049 544 aa19.23■□□□□ 0.67
LINC00271-201ENST00000421378 MGEA5O60502 916 aa19.23■□□□□ 0.67
LINC00271-201ENST00000421378 PIGRP01833 764 aa19.23■□□□□ 0.67
LINC00271-201ENST00000421378 BMP6P22004 513 aa19.23■□□□□ 0.67
LINC00271-201ENST00000421378 CDR2LQ86X02 465 aaPredicted RBP19.23■□□□□ 0.67
LINC00271-201ENST00000421378 GUF1Q8N442 669 aaKnown RBP19.23■□□□□ 0.67
LINC00271-201ENST00000421378 CCDC51Q96ER9 411 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms