RNA–Protein interactions for RNA: ENST00000420503.1

LINC00339-203, long intergenic non-protein coding RNA 339, humanhuman

TSL 3

Gene LINC00339, Length 771 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-203ENST00000420503 RFPL2O75678 378 aa14.44□□□□□ -0.1
LINC00339-203ENST00000420503 SPATA31D3P0C874 917 aa14.44□□□□□ -0.1
LINC00339-203ENST00000420503 SRGAP2CP0DJJ0 459 aa14.44□□□□□ -0.1
LINC00339-203ENST00000420503 KLRC2P26717 231 aa14.44□□□□□ -0.1
LINC00339-203ENST00000420503 POLGP54098 1239 aaPredicted RBP14.44□□□□□ -0.1
LINC00339-203ENST00000420503 MCTP2Q6DN12 878 aa14.44□□□□□ -0.1
LINC00339-203ENST00000420503 SPATA31D4Q6ZUB0 917 aa14.44□□□□□ -0.1
LINC00339-203ENST00000420503 ZNF410Q86VK4 478 aa14.44□□□□□ -0.1
LINC00339-203ENST00000420503 TMEM87AQ8NBN3 555 aa14.44□□□□□ -0.1
LINC00339-203ENST00000420503 SMG8Q8ND04 991 aaKnown RBP14.44□□□□□ -0.1
LINC00339-203ENST00000420503 RABGGTAQ92696 567 aa14.44□□□□□ -0.1
LINC00339-203ENST00000420503 EIF2AQ9BY44 585 aaKnown RBP14.44□□□□□ -0.1
LINC00339-203ENST00000420503 SFXN1Q9H9B4 322 aa14.44□□□□□ -0.1
LINC00339-203ENST00000420503 KCNK12Q9HB15 430 aa14.44□□□□□ -0.1
LINC00339-203ENST00000420503 MIOSQ9NXC5 875 aa14.44□□□□□ -0.1
LINC00339-203ENST00000420503 CACNG4Q9UBN1 327 aa14.44□□□□□ -0.1
LINC00339-203ENST00000420503 HES2Q9Y543 173 aa14.44□□□□□ -0.1
LINC00339-203ENST00000420503 COL4A3BPQ9Y5P4 624 aa14.44□□□□□ -0.1
LINC00339-203ENST00000420503 GPR179Q6PRD1 2367 aa14.44□□□□□ -0.1
LINC00339-203ENST00000420503 CYP3A7-CYP3A51PA0A087WV96 503 aa14.43□□□□□ -0.1
LINC00339-203ENST00000420503 FAM205CA6NFA0 338 aa14.43□□□□□ -0.1
LINC00339-203ENST00000420503 SPDYE4A6NLX3 237 aa14.43□□□□□ -0.1
LINC00339-203ENST00000420503 NRP1O14786 923 aa14.43□□□□□ -0.1
LINC00339-203ENST00000420503 ZNF623O75123 536 aa14.43□□□□□ -0.1
LINC00339-203ENST00000420503 CYP3A7P24462 503 aa14.43□□□□□ -0.1
LINC00339-203ENST00000420503 STK3Q13188 491 aa14.43□□□□□ -0.1
LINC00339-203ENST00000420503 CCDC149Q6ZUS6 474 aa14.43□□□□□ -0.1
LINC00339-203ENST00000420503 BLIDQ8IZY5 108 aa14.43□□□□□ -0.1
LINC00339-203ENST00000420503 SIX5Q8N196 739 aa14.43□□□□□ -0.1
LINC00339-203ENST00000420503 PRPF31Q8WWY3 499 aaKnown RBP14.43□□□□□ -0.1
LINC00339-203ENST00000420503 ZFP42Q96MM3 310 aa14.43□□□□□ -0.1
LINC00339-203ENST00000420503 RSAD1Q9HA92 442 aa14.43□□□□□ -0.1
LINC00339-203ENST00000420503 MAN1C1Q9NR34 630 aa14.43□□□□□ -0.1
LINC00339-203ENST00000420503 DDX25Q9UHL0 483 aaKnown RBP14.43□□□□□ -0.1
LINC00339-203ENST00000420503 USTQ9Y2C2 406 aa14.43□□□□□ -0.1
LINC00339-203ENST00000420503 KRBA1A5PL33 1030 aa14.42□□□□□ -0.1
LINC00339-203ENST00000420503 TEX28O15482 410 aa14.42□□□□□ -0.1
LINC00339-203ENST00000420503 CFHP08603 1231 aa14.42□□□□□ -0.1
LINC00339-203ENST00000420503 EVCP57679 992 aa14.42□□□□□ -0.1
LINC00339-203ENST00000420503 PSMC5P62195 406 aa14.42□□□□□ -0.1
LINC00339-203ENST00000420503 LETM2Q2VYF4 491 aa14.42□□□□□ -0.1
LINC00339-203ENST00000420503 EARS2Q5JPH6 523 aaKnown RBP14.42□□□□□ -0.1
LINC00339-203ENST00000420503 MRPL10Q7Z7H8 261 aaKnown RBP14.42□□□□□ -0.1
LINC00339-203ENST00000420503 ZNF710Q8N1W2 664 aa14.42□□□□□ -0.1
LINC00339-203ENST00000420503 FBXL16Q8N461 479 aa14.42□□□□□ -0.1
LINC00339-203ENST00000420503 RDM1Q8NG50 284 aa14.42□□□□□ -0.1
LINC00339-203ENST00000420503 OXER1Q8TDS5 423 aa14.42□□□□□ -0.1
LINC00339-203ENST00000420503 CPB2Q96IY4 423 aa14.42□□□□□ -0.1
LINC00339-203ENST00000420503 MYADMQ96S97 322 aa14.42□□□□□ -0.1
LINC00339-203ENST00000420503 RGL1Q9NZL6 768 aa14.42□□□□□ -0.1
LINC00339-203ENST00000420503 DUSP12Q9UNI6 340 aa14.42□□□□□ -0.1
LINC00339-203ENST00000420503 WDR87Q6ZQQ6 2873 aa14.41□□□□□ -0.1
LINC00339-203ENST00000420503 CACNA1IQ9P0X4 2223 aa14.41□□□□□ -0.1
LINC00339-203ENST00000420503 A0A087WWV3 80 aa14.41□□□□□ -0.1
LINC00339-203ENST00000420503 AOC1P19801 751 aa14.41□□□□□ -0.1
LINC00339-203ENST00000420503 MLH1P40692 756 aa14.41□□□□□ -0.1
LINC00339-203ENST00000420503 DNM2P50570 870 aa14.41□□□□□ -0.1
LINC00339-203ENST00000420503 RAB27AP51159 221 aa14.41□□□□□ -0.1
LINC00339-203ENST00000420503 CLCN5P51795 746 aa14.41□□□□□ -0.1
LINC00339-203ENST00000420503 AK2P54819 239 aa14.41□□□□□ -0.1
LINC00339-203ENST00000420503 LAMTOR4Q0VGL1 99 aa14.41□□□□□ -0.1
LINC00339-203ENST00000420503 TDGQ13569 410 aa14.41□□□□□ -0.1
LINC00339-203ENST00000420503 CDR2LQ86X02 465 aaPredicted RBP14.41□□□□□ -0.1
LINC00339-203ENST00000420503 GLYCTKQ8IVS8 523 aa14.41□□□□□ -0.1
LINC00339-203ENST00000420503 CCDC105Q8IYK2 499 aa14.41□□□□□ -0.1
LINC00339-203ENST00000420503 COLGALT2Q8IYK4 626 aa14.41□□□□□ -0.1
LINC00339-203ENST00000420503 ADSSL1Q8N142 457 aa14.41□□□□□ -0.1
LINC00339-203ENST00000420503 PLCD3Q8N3E9 789 aa14.41□□□□□ -0.1
LINC00339-203ENST00000420503 HAS1Q92839 578 aa14.41□□□□□ -0.1
LINC00339-203ENST00000420503 ZNF707Q96C28 371 aaPredicted RBP14.41□□□□□ -0.1
LINC00339-203ENST00000420503 CEP170P1Q96L14 293 aa14.41□□□□□ -0.1
LINC00339-203ENST00000420503 GAD1Q99259 594 aa14.41□□□□□ -0.1
LINC00339-203ENST00000420503 APOL6Q9BWW8 343 aa14.41□□□□□ -0.1
LINC00339-203ENST00000420503 DHX33Q9H6R0 707 aaKnown RBP14.41□□□□□ -0.1
LINC00339-203ENST00000420503 XPNPEP1Q9NQW7 623 aa14.41□□□□□ -0.1
LINC00339-203ENST00000420503 SH3GLB2Q9NR46 395 aa14.41□□□□□ -0.1
LINC00339-203ENST00000420503 FAN1Q9Y2M0 1017 aa14.41□□□□□ -0.1
LINC00339-203ENST00000420503 TDRD15B5MCY1 1934 aaKnown RBP14.41□□□□□ -0.1
LINC00339-203ENST00000420503 OTOGLQ3ZCN5 2332 aa14.4□□□□□ -0.1
LINC00339-203ENST00000420503 TSPAN1O60635 241 aa14.4□□□□□ -0.1
LINC00339-203ENST00000420503 EFEMP2O95967 443 aa14.4□□□□□ -0.1
LINC00339-203ENST00000420503 RPL17P18621 184 aaKnown RBP14.4□□□□□ -0.1
LINC00339-203ENST00000420503 OR1G1P47890 313 aa14.4□□□□□ -0.1
LINC00339-203ENST00000420503 SCNN1GP51170 649 aa14.4□□□□□ -0.1
LINC00339-203ENST00000420503 NUBP1P53384 320 aa14.4□□□□□ -0.1
LINC00339-203ENST00000420503 CYP4A11Q02928 519 aa14.4□□□□□ -0.1
LINC00339-203ENST00000420503 SSRP1Q08945 709 aaKnown RBP14.4□□□□□ -0.1
LINC00339-203ENST00000420503 GIT2Q14161 759 aa14.4□□□□□ -0.1
LINC00339-203ENST00000420503 CTTNQ14247 550 aaKnown RBP14.4□□□□□ -0.1
LINC00339-203ENST00000420503 BMS1Q14692 1282 aaKnown RBP14.4□□□□□ -0.1
LINC00339-203ENST00000420503 EMC2Q15006 297 aa14.4□□□□□ -0.1
LINC00339-203ENST00000420503 NONOQ15233 471 aaKnown RBP eCLIP14.4□□□□□ -0.1
LINC00339-203ENST00000420503 ANGPT1Q15389 498 aa14.4□□□□□ -0.1
LINC00339-203ENST00000420503 OTOP3Q7RTS5 596 aa14.4□□□□□ -0.1
LINC00339-203ENST00000420503 RNF168Q8IYW5 571 aaPredicted RBP14.4□□□□□ -0.1
LINC00339-203ENST00000420503 RNF149Q8NC42 400 aa14.4□□□□□ -0.1
LINC00339-203ENST00000420503 DAGLBQ8NCG7 672 aa14.4□□□□□ -0.1
LINC00339-203ENST00000420503 URGCPQ8TCY9 931 aa14.4□□□□□ -0.1
LINC00339-203ENST00000420503 ASAP3Q8TDY4 903 aa14.4□□□□□ -0.1
LINC00339-203ENST00000420503 RIN2Q8WYP3 895 aaPredicted RBP14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms