RNA–Protein interactions for RNA: ENST00000420138.5

GPC1-202, Transcript of glypican 1, humanhuman

TSL 5 BASIC

Gene GPC1, Length 1,835 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-202ENST00000420138 VEGFBP49765 207 aa22.87■■□□□ 1.25
GPC1-202ENST00000420138 IRF5Q13568 498 aa22.87■■□□□ 1.25
GPC1-202ENST00000420138 RRAGAQ7L523 313 aa22.87■■□□□ 1.25
GPC1-202ENST00000420138 LRRC71Q8N4P6 559 aa22.87■■□□□ 1.25
GPC1-202ENST00000420138 USP20Q9Y2K6 914 aa22.87■■□□□ 1.25
GPC1-202ENST00000420138 A0A0U1RQJ8 604 aa22.86■■□□□ 1.25
GPC1-202ENST00000420138 GOLGA8IPA6NC78 632 aa22.86■■□□□ 1.25
GPC1-202ENST00000420138 GOLGA8JA6NMD2 632 aa22.86■■□□□ 1.25
GPC1-202ENST00000420138 GAS2O43903 313 aaKnown RBP22.86■■□□□ 1.25
GPC1-202ENST00000420138 ADCY3O60266 1144 aa22.86■■□□□ 1.25
GPC1-202ENST00000420138 TBC1D8O95759 1140 aa22.86■■□□□ 1.25
GPC1-202ENST00000420138 PIGRP01833 764 aa22.86■■□□□ 1.25
GPC1-202ENST00000420138 ZNF865P0CJ78 1059 aaPredicted RBP22.86■■□□□ 1.25
GPC1-202ENST00000420138 RGS2P41220 211 aa22.86■■□□□ 1.25
GPC1-202ENST00000420138 POLR2FP61218 127 aaKnown RBP22.86■■□□□ 1.25
GPC1-202ENST00000420138 TSR1Q2NL82 804 aaKnown RBP22.86■■□□□ 1.25
GPC1-202ENST00000420138 KLHDC7AQ5VTJ3 777 aa22.86■■□□□ 1.25
GPC1-202ENST00000420138 GBP6Q6ZN66 633 aa22.86■■□□□ 1.25
GPC1-202ENST00000420138 CBWD2Q8IUF1 395 aa22.86■■□□□ 1.25
GPC1-202ENST00000420138 ACRBPQ8NEB7 543 aa22.86■■□□□ 1.25
GPC1-202ENST00000420138 DEPTORQ8TB45 409 aa22.86■■□□□ 1.25
GPC1-202ENST00000420138 ATRIPQ8WXE1 791 aa22.86■■□□□ 1.25
GPC1-202ENST00000420138 ZBTB10Q96DT7 871 aa22.86■■□□□ 1.25
GPC1-202ENST00000420138 SAAL1Q96ER3 474 aa22.86■■□□□ 1.25
GPC1-202ENST00000420138 SUGCTQ9HAC7 445 aa22.86■■□□□ 1.25
GPC1-202ENST00000420138 NLRC4Q9NPP4 1024 aa22.86■■□□□ 1.25
GPC1-202ENST00000420138 REXO2Q9Y3B8 237 aaKnown RBP22.86■■□□□ 1.25
GPC1-202ENST00000420138 STYXL1Q9Y6J8 313 aa22.86■■□□□ 1.25
GPC1-202ENST00000420138 HNRNPDLO14979 420 aaKnown RBP22.85■■□□□ 1.25
GPC1-202ENST00000420138 MMP3P08254 477 aa22.85■■□□□ 1.25
GPC1-202ENST00000420138 CCDC175P0C221 793 aa22.85■■□□□ 1.25
GPC1-202ENST00000420138 ZNF286BP0CG31 522 aa22.85■■□□□ 1.25
GPC1-202ENST00000420138 GARTP22102 1010 aa22.85■■□□□ 1.25
GPC1-202ENST00000420138 FCGRTP55899 365 aa22.85■■□□□ 1.25
GPC1-202ENST00000420138 LACTBP83111 547 aaPredicted RBP22.85■■□□□ 1.25
GPC1-202ENST00000420138 EXOC8Q8IYI6 725 aa22.85■■□□□ 1.25
GPC1-202ENST00000420138 KIF18AQ8NI77 898 aa22.85■■□□□ 1.25
GPC1-202ENST00000420138 TMEM134Q9H6X4 195 aa22.85■■□□□ 1.25
GPC1-202ENST00000420138 ARHGAP20Q9P2F6 1191 aa22.85■■□□□ 1.25
GPC1-202ENST00000420138 GNEQ9Y223 722 aaKnown RBP22.85■■□□□ 1.25
GPC1-202ENST00000420138 EPN1Q9Y6I3 576 aaPredicted RBP22.85■■□□□ 1.25
GPC1-202ENST00000420138 NDUFA10O95299 355 aa22.85■■□□□ 1.25
GPC1-202ENST00000420138 C22orf31O95567 290 aa22.85■■□□□ 1.25
GPC1-202ENST00000420138 INSRRP14616 1297 aa22.85■■□□□ 1.25
GPC1-202ENST00000420138 CYP2B6P20813 491 aa22.85■■□□□ 1.25
GPC1-202ENST00000420138 PSMC4P43686 418 aa22.85■■□□□ 1.25
GPC1-202ENST00000420138 VAMP7P51809 220 aa22.85■■□□□ 1.25
GPC1-202ENST00000420138 LAMTOR4Q0VGL1 99 aa22.85■■□□□ 1.25
GPC1-202ENST00000420138 SNRNP35Q16560 246 aaKnown RBP22.85■■□□□ 1.25
GPC1-202ENST00000420138 TRIM65Q6PJ69 517 aa22.85■■□□□ 1.25
GPC1-202ENST00000420138 CACNA2D4Q7Z3S7 1137 aa22.85■■□□□ 1.25
GPC1-202ENST00000420138 ZNHIT6Q9NWK9 470 aaKnown RBP22.85■■□□□ 1.25
GPC1-202ENST00000420138 GCNT4Q9P109 453 aa22.85■■□□□ 1.25
GPC1-202ENST00000420138 THSD7BQ9C0I4 1608 aa22.84■■□□□ 1.25
GPC1-202ENST00000420138 K7ERI5 159 aa22.84■■□□□ 1.25
GPC1-202ENST00000420138 KRT13P13646 458 aa22.84■■□□□ 1.25
GPC1-202ENST00000420138 UCHL3P15374 230 aa22.84■■□□□ 1.25
GPC1-202ENST00000420138 CYP2C19P33261 490 aa22.84■■□□□ 1.25
GPC1-202ENST00000420138 TNFAIP2Q03169 654 aa22.84■■□□□ 1.25
GPC1-202ENST00000420138 PPP3CAQ08209 521 aa22.84■■□□□ 1.25
GPC1-202ENST00000420138 OLFML2BQ68BL8 750 aa22.84■■□□□ 1.25
GPC1-202ENST00000420138 CDCA2Q69YH5 1023 aaPredicted RBP22.84■■□□□ 1.25
GPC1-202ENST00000420138 OR6J1Q8NGC5 347 aa22.84■■□□□ 1.25
GPC1-202ENST00000420138 TCP11Q8WWU5 503 aa22.84■■□□□ 1.25
GPC1-202ENST00000420138 APBA2Q99767 749 aa22.84■■□□□ 1.25
GPC1-202ENST00000420138 HAPLN2Q9GZV7 340 aa22.84■■□□□ 1.25
GPC1-202ENST00000420138 NHEJ1Q9H9Q4 299 aaPredicted RBP22.84■■□□□ 1.25
GPC1-202ENST00000420138 FBXL5Q9UKA1 691 aa22.84■■□□□ 1.25
GPC1-202ENST00000420138 TRPA1O75762 1119 aa22.83■■□□□ 1.25
GPC1-202ENST00000420138 PLEKP08567 350 aaPredicted RBP22.83■■□□□ 1.25
GPC1-202ENST00000420138 ZNF484Q5JVG2 852 aa22.83■■□□□ 1.25
GPC1-202ENST00000420138 HGSNATQ68CP4 663 aa22.83■■□□□ 1.25
GPC1-202ENST00000420138 LINC01465Q8N7H1 131 aa22.83■■□□□ 1.25
GPC1-202ENST00000420138 PSPC1Q8WXF1 523 aaKnown RBP22.83■■□□□ 1.25
GPC1-202ENST00000420138 POMGNT1Q8WZA1 660 aa22.83■■□□□ 1.25
GPC1-202ENST00000420138 SYN2Q92777 582 aaPredicted RBP22.83■■□□□ 1.25
GPC1-202ENST00000420138 ARHGAP39Q9C0H5 1083 aa22.83■■□□□ 1.25
GPC1-202ENST00000420138 CCDC113Q9H0I3 377 aa22.83■■□□□ 1.25
GPC1-202ENST00000420138 AJAP1Q9UKB5 411 aaPredicted RBP22.83■■□□□ 1.25
GPC1-202ENST00000420138 CTIFO43310 598 aaKnown RBP22.82■■□□□ 1.24
GPC1-202ENST00000420138 STRN3Q13033 797 aa22.82■■□□□ 1.24
GPC1-202ENST00000420138 MXD4Q14582 209 aaPredicted RBP22.82■■□□□ 1.24
GPC1-202ENST00000420138 LMO3Q8TAP4 145 aa22.82■■□□□ 1.24
GPC1-202ENST00000420138 MFSD14AQ96MC6 490 aa22.82■■□□□ 1.24
GPC1-202ENST00000420138 JPH2Q9BR39 696 aaPredicted RBP22.82■■□□□ 1.24
GPC1-202ENST00000420138 RNF186Q9NXI6 227 aa22.82■■□□□ 1.24
GPC1-202ENST00000420138 SUCLA2Q9P2R7 463 aaPredicted RBP22.82■■□□□ 1.24
GPC1-202ENST00000420138 FHOD1Q9Y613 1164 aa22.82■■□□□ 1.24
GPC1-202ENST00000420138 PHLPP2Q6ZVD8 1323 aa22.82■■□□□ 1.24
GPC1-202ENST00000420138 SIP14410 1827 aa22.82■■□□□ 1.24
GPC1-202ENST00000420138 H3BRB1 525 aa22.82■■□□□ 1.24
GPC1-202ENST00000420138 LIG4P49917 911 aa22.82■■□□□ 1.24
GPC1-202ENST00000420138 SP3Q02447 781 aa22.82■■□□□ 1.24
GPC1-202ENST00000420138 EFCAB12Q6NXP0 572 aa22.82■■□□□ 1.24
GPC1-202ENST00000420138 CCDC170Q8IYT3 715 aa22.82■■□□□ 1.24
GPC1-202ENST00000420138 BICD1Q96G01 975 aa22.82■■□□□ 1.24
GPC1-202ENST00000420138 CFHR5Q9BXR6 569 aa22.82■■□□□ 1.24
GPC1-202ENST00000420138 TUT1Q9H6E5 874 aaKnown RBP22.82■■□□□ 1.24
GPC1-202ENST00000420138 GOLGA6L9A6NEM1 432 aa22.81■■□□□ 1.24
GPC1-202ENST00000420138 A6NJR5 290 aa22.81■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms