RNA–Protein interactions for RNA: ENST00000415148.6

CD44-206, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-206ENST00000415148 BCS1LQ9Y276 419 aa10.57□□□□□ -0.72
CD44-206ENST00000415148 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.57□□□□□ -0.72
CD44-206ENST00000415148 USP20Q9Y2K6 914 aa10.57□□□□□ -0.72
CD44-206ENST00000415148 SPATA31A6Q5VVP1 1343 aa10.57□□□□□ -0.72
CD44-206ENST00000415148 MTA2O94776 668 aa10.57□□□□□ -0.72
CD44-206ENST00000415148 CETN1Q12798 172 aa10.57□□□□□ -0.72
CD44-206ENST00000415148 IKQ13123 557 aaPredicted RBP10.57□□□□□ -0.72
CD44-206ENST00000415148 MAPK7Q13164 816 aa10.57□□□□□ -0.72
CD44-206ENST00000415148 MKRN4PQ13434 485 aaPredicted RBP10.57□□□□□ -0.72
CD44-206ENST00000415148 DOK7Q18PE1 504 aa10.57□□□□□ -0.72
CD44-206ENST00000415148 ACCSLQ4AC99 568 aa10.57□□□□□ -0.72
CD44-206ENST00000415148 C6orf118Q5T5N4 469 aa10.57□□□□□ -0.72
CD44-206ENST00000415148 CCDC50Q8IVM0 306 aa10.57□□□□□ -0.72
CD44-206ENST00000415148 LMO3Q8TAP4 145 aa10.57□□□□□ -0.72
CD44-206ENST00000415148 NEK9Q8TD19 979 aa10.57□□□□□ -0.72
CD44-206ENST00000415148 RNF25Q96BH1 459 aaPredicted RBP10.57□□□□□ -0.72
CD44-206ENST00000415148 HVCN1Q96D96 273 aa10.57□□□□□ -0.72
CD44-206ENST00000415148 ARHGEF26Q96DR7 871 aa10.57□□□□□ -0.72
CD44-206ENST00000415148 TACO1Q9BSH4 297 aaKnown RBP10.57□□□□□ -0.72
CD44-206ENST00000415148 THAP2Q9H0W7 228 aa10.57□□□□□ -0.72
CD44-206ENST00000415148 TAS2R14Q9NYV8 317 aa10.57□□□□□ -0.72
CD44-206ENST00000415148 CHORDC1Q9UHD1 332 aaPredicted RBP10.57□□□□□ -0.72
CD44-206ENST00000415148 USP21Q9UK80 565 aa10.57□□□□□ -0.72
CD44-206ENST00000415148 ALG6Q9Y672 507 aa10.57□□□□□ -0.72
CD44-206ENST00000415148 LOXHD1Q8IVV2 1947 aa10.56□□□□□ -0.72
CD44-206ENST00000415148 KIAA0391O15091 583 aaKnown RBP10.56□□□□□ -0.72
CD44-206ENST00000415148 MAPK13O15264 365 aa10.56□□□□□ -0.72
CD44-206ENST00000415148 PMM2O15305 246 aa10.56□□□□□ -0.72
CD44-206ENST00000415148 KRT13P13646 458 aa10.56□□□□□ -0.72
CD44-206ENST00000415148 ABCB4P21439 1286 aa10.56□□□□□ -0.72
CD44-206ENST00000415148 CTNNA2P26232 953 aa10.56□□□□□ -0.72
CD44-206ENST00000415148 HOXA13P31271 388 aaPredicted RBP10.56□□□□□ -0.72
CD44-206ENST00000415148 PTGIRP43119 386 aa10.56□□□□□ -0.72
CD44-206ENST00000415148 MCCD1P59942 119 aaPredicted RBP10.56□□□□□ -0.72
CD44-206ENST00000415148 SNAP25P60880 206 aa10.56□□□□□ -0.72
CD44-206ENST00000415148 GPC5P78333 572 aa10.56□□□□□ -0.72
CD44-206ENST00000415148 TCP10Q12799 353 aa10.56□□□□□ -0.72
CD44-206ENST00000415148 PRPF4BQ13523 1007 aaKnown RBP10.56□□□□□ -0.72
CD44-206ENST00000415148 FAM182BQ5T319 152 aa10.56□□□□□ -0.72
CD44-206ENST00000415148 RBM26Q5T8P6 1007 aaKnown RBP10.56□□□□□ -0.72
CD44-206ENST00000415148 WLSQ5T9L3 541 aa10.56□□□□□ -0.72
CD44-206ENST00000415148 PHLDB3Q6NSJ2 640 aa10.56□□□□□ -0.72
CD44-206ENST00000415148 INTS8Q75QN2 995 aaKnown RBP10.56□□□□□ -0.72
CD44-206ENST00000415148 SH3BP5LQ7L8J4 393 aa10.56□□□□□ -0.72
CD44-206ENST00000415148 CPLX4Q7Z7G2 160 aa10.56□□□□□ -0.72
CD44-206ENST00000415148 JAMLQ86YT9 394 aa10.56□□□□□ -0.72
CD44-206ENST00000415148 KSR1Q8IVT5 923 aa10.56□□□□□ -0.72
CD44-206ENST00000415148 C12orf56Q8IXR9 622 aa10.56□□□□□ -0.72
CD44-206ENST00000415148 CHMP6Q96FZ7 201 aa10.56□□□□□ -0.72
CD44-206ENST00000415148 XPO6Q96QU8 1125 aaKnown RBP10.56□□□□□ -0.72
CD44-206ENST00000415148 WDR18Q9BV38 432 aa10.56□□□□□ -0.72
CD44-206ENST00000415148 STMN4Q9H169 189 aaPredicted RBP10.56□□□□□ -0.72
CD44-206ENST00000415148 WNT8AQ9H1J5 351 aa10.56□□□□□ -0.72
CD44-206ENST00000415148 GGT7Q9UJ14 662 aa10.56□□□□□ -0.72
CD44-206ENST00000415148 PRR12Q9ULL5 1215 aa10.56□□□□□ -0.72
CD44-206ENST00000415148 FOXO6A8MYZ6 492 aa10.55□□□□□ -0.72
CD44-206ENST00000415148 FOXN3O00409 490 aaPredicted RBP10.55□□□□□ -0.72
CD44-206ENST00000415148 ASAP2O43150 1006 aa10.55□□□□□ -0.72
CD44-206ENST00000415148 RTN2O75298 545 aa10.55□□□□□ -0.72
CD44-206ENST00000415148 GZMAP12544 262 aa10.55□□□□□ -0.72
CD44-206ENST00000415148 CHN1P15882 459 aa10.55□□□□□ -0.72
CD44-206ENST00000415148 SNRPFP62306 86 aaKnown RBP10.55□□□□□ -0.72
CD44-206ENST00000415148 ADCY2Q08462 1091 aa10.55□□□□□ -0.72
CD44-206ENST00000415148 COG2Q14746 738 aa10.55□□□□□ -0.72
CD44-206ENST00000415148 ODR4Q5SWX8 454 aa10.55□□□□□ -0.72
CD44-206ENST00000415148 STRIP1Q5VSL9 837 aa10.55□□□□□ -0.72
CD44-206ENST00000415148 DENND2CQ68D51 928 aa10.55□□□□□ -0.72
CD44-206ENST00000415148 COL23A1Q86Y22 540 aaPredicted RBP10.55□□□□□ -0.72
CD44-206ENST00000415148 CPNE8Q86YQ8 564 aa10.55□□□□□ -0.72
CD44-206ENST00000415148 ZDHHC14Q8IZN3 488 aa10.55□□□□□ -0.72
CD44-206ENST00000415148 N4BP2L2Q92802 583 aaPredicted RBP10.55□□□□□ -0.72
CD44-206ENST00000415148 ZNF317Q96PQ6 595 aaPredicted RBP10.55□□□□□ -0.72
CD44-206ENST00000415148 TMEM206Q9H813 350 aa10.55□□□□□ -0.72
CD44-206ENST00000415148 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.55□□□□□ -0.72
CD44-206ENST00000415148 MTRF1LQ9UGC7 380 aaKnown RBP10.55□□□□□ -0.72
CD44-206ENST00000415148 SUFUQ9UMX1 484 aa10.55□□□□□ -0.72
CD44-206ENST00000415148 COG5Q9UP83 839 aa10.55□□□□□ -0.72
CD44-206ENST00000415148 ATRNL1Q5VV63 1379 aa10.55□□□□□ -0.72
CD44-206ENST00000415148 COL2A1P02458 1487 aaPredicted RBP10.55□□□□□ -0.72
CD44-206ENST00000415148 TLDC2A0PJX2 215 aa10.55□□□□□ -0.72
CD44-206ENST00000415148 EXOC3O60645 756 aa10.55□□□□□ -0.72
CD44-206ENST00000415148 GAS7O60861 476 aa10.55□□□□□ -0.72
CD44-206ENST00000415148 LRRN2O75325 713 aa10.55□□□□□ -0.72
CD44-206ENST00000415148 ENTPD3O75355 529 aa10.55□□□□□ -0.72
CD44-206ENST00000415148 AGTP01019 485 aa10.55□□□□□ -0.72
CD44-206ENST00000415148 POLR2MP0CAP2 368 aa10.55□□□□□ -0.72
CD44-206ENST00000415148 MMP13P45452 471 aa10.55□□□□□ -0.72
CD44-206ENST00000415148 PSEN1P49768 467 aa10.55□□□□□ -0.72
CD44-206ENST00000415148 CYP2J2P51589 502 aa10.55□□□□□ -0.72
CD44-206ENST00000415148 SLMAPQ14BN4 828 aa10.55□□□□□ -0.72
CD44-206ENST00000415148 SNCBQ16143 134 aa10.55□□□□□ -0.72
CD44-206ENST00000415148 CYP1B1Q16678 543 aa10.55□□□□□ -0.72
CD44-206ENST00000415148 B3GNT9Q6UX72 402 aa10.55□□□□□ -0.72
CD44-206ENST00000415148 ZDHHC24Q6UX98 284 aa10.55□□□□□ -0.72
CD44-206ENST00000415148 MAGEC3Q8TD91 643 aa10.55□□□□□ -0.72
CD44-206ENST00000415148 ATXN2LQ8WWM7 1075 aaKnown RBP10.55□□□□□ -0.72
CD44-206ENST00000415148 ALG3Q92685 438 aa10.55□□□□□ -0.72
CD44-206ENST00000415148 SGSM3Q96HU1 749 aa10.55□□□□□ -0.72
CD44-206ENST00000415148 TAOK3Q9H2K8 898 aa10.55□□□□□ -0.72
CD44-206ENST00000415148 CCDC134Q9H6E4 229 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms