RNA–Protein interactions for RNA: ENST00000413658.6

ZNF3-205, Transcript of zinc finger protein 3, human

TSL 1 (best) BASIC

Gene ZNF3, Length 1,441 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ZNF3-205	ENST00000413658	DEFB128	Q7Z7B8	93 aa		11.34	□□□□□ -0.59
ZNF3-205	ENST00000413658	MYCT1	Q8N699	235 aa		11.34	□□□□□ -0.59
ZNF3-205	ENST00000413658	SPATA20	Q8TB22	786 aa		11.34	□□□□□ -0.59
ZNF3-205	ENST00000413658	SCLT1	Q96NL6	688 aa		11.34	□□□□□ -0.59
ZNF3-205	ENST00000413658	GDF15	Q99988	308 aa		11.34	□□□□□ -0.59
ZNF3-205	ENST00000413658	FGFBP2	Q9BYJ0	223 aa		11.34	□□□□□ -0.59
ZNF3-205	ENST00000413658	TMX1	Q9H3N1	280 aa		11.34	□□□□□ -0.59
ZNF3-205	ENST00000413658	FZD8	Q9H461	694 aa		11.34	□□□□□ -0.59
ZNF3-205	ENST00000413658	KMT5A	Q9NQR1	393 aa		11.34	□□□□□ -0.59
ZNF3-205	ENST00000413658	OLFML3	Q9NRN5	406 aa		11.34	□□□□□ -0.59
ZNF3-205	ENST00000413658	LARS	Q9P2J5	1176 aa	Known RBP	11.34	□□□□□ -0.59
ZNF3-205	ENST00000413658	SEL1L	Q9UBV2	794 aa		11.34	□□□□□ -0.59
ZNF3-205	ENST00000413658	ST3GAL5	Q9UNP4	418 aa		11.34	□□□□□ -0.59
ZNF3-205	ENST00000413658	CCDC169	A6NNP5	214 aa		11.33	□□□□□ -0.6
ZNF3-205	ENST00000413658	TRAK2	O60296	914 aa		11.33	□□□□□ -0.6
ZNF3-205	ENST00000413658	RPS6KA5	O75582	802 aa		11.33	□□□□□ -0.6
ZNF3-205	ENST00000413658	PPP1R37	O75864	691 aa		11.33	□□□□□ -0.6
ZNF3-205	ENST00000413658	ACR	P10323	421 aa		11.33	□□□□□ -0.6
ZNF3-205	ENST00000413658	MAPT	P10636	758 aa	Known RBP	11.33	□□□□□ -0.6
ZNF3-205	ENST00000413658	IDE	P14735	1019 aa		11.33	□□□□□ -0.6
ZNF3-205	ENST00000413658	NMT1	P30419	496 aa	Known RBP	11.33	□□□□□ -0.6
ZNF3-205	ENST00000413658	HOXA11	P31270	313 aa	Predicted RBP	11.33	□□□□□ -0.6
ZNF3-205	ENST00000413658	CASP5	P51878	434 aa		11.33	□□□□□ -0.6
ZNF3-205	ENST00000413658	DSC3	Q14574	896 aa		11.33	□□□□□ -0.6
ZNF3-205	ENST00000413658	HERC4	Q5GLZ8	1057 aa	Predicted RBP	11.33	□□□□□ -0.6
ZNF3-205	ENST00000413658	RTN4RL1	Q86UN2	441 aa	Predicted RBP	11.33	□□□□□ -0.6
ZNF3-205	ENST00000413658	CCDC65	Q8IXS2	484 aa		11.33	□□□□□ -0.6
ZNF3-205	ENST00000413658	GLIS3	Q8NEA6	775 aa		11.33	□□□□□ -0.6
ZNF3-205	ENST00000413658	DBF4B	Q8NFT6	615 aa		11.33	□□□□□ -0.6
ZNF3-205	ENST00000413658	DEPTOR	Q8TB45	409 aa		11.33	□□□□□ -0.6
ZNF3-205	ENST00000413658	LINC01599	Q8WXQ3	324 aa		11.33	□□□□□ -0.6
ZNF3-205	ENST00000413658	ERCC4	Q92889	916 aa	Predicted RBP	11.33	□□□□□ -0.6
ZNF3-205	ENST00000413658	HPS3	Q969F9	1004 aa		11.33	□□□□□ -0.6
ZNF3-205	ENST00000413658	IFIH1	Q9BYX4	1025 aa	Known RBP	11.33	□□□□□ -0.6
ZNF3-205	ENST00000413658	C2orf40	Q9H1Z8	148 aa		11.33	□□□□□ -0.6
ZNF3-205	ENST00000413658	ST6GALNAC4	Q9H4F1	302 aa		11.33	□□□□□ -0.6
ZNF3-205	ENST00000413658	ZHX3	Q9H4I2	956 aa		11.33	□□□□□ -0.6
ZNF3-205	ENST00000413658	TMEM134	Q9H6X4	195 aa		11.33	□□□□□ -0.6
ZNF3-205	ENST00000413658	TRIP11	Q15643	1979 aa		11.33	□□□□□ -0.6
ZNF3-205	ENST00000413658	GBF1	Q92538	1859 aa		11.32	□□□□□ -0.6
ZNF3-205	ENST00000413658	INO80B-WBP1	J3KQ70	363 aa		11.32	□□□□□ -0.6
ZNF3-205	ENST00000413658	B4GALT5	O43286	388 aa		11.32	□□□□□ -0.6
ZNF3-205	ENST00000413658	MGEA5	O60502	916 aa		11.32	□□□□□ -0.6
ZNF3-205	ENST00000413658	TSPAN1	O60635	241 aa		11.32	□□□□□ -0.6
ZNF3-205	ENST00000413658	RPN1	P04843	607 aa	Known RBP	11.32	□□□□□ -0.6
ZNF3-205	ENST00000413658	PFKM	P08237	780 aa		11.32	□□□□□ -0.6
ZNF3-205	ENST00000413658	SARS	P49591	514 aa	Known RBP	11.32	□□□□□ -0.6
ZNF3-205	ENST00000413658	EFNA5	P52803	228 aa		11.32	□□□□□ -0.6
ZNF3-205	ENST00000413658	SMTN	P53814	917 aa		11.32	□□□□□ -0.6
ZNF3-205	ENST00000413658	GTF2B	Q00403	316 aa		11.32	□□□□□ -0.6
ZNF3-205	ENST00000413658	PAK2	Q13177	524 aa		11.32	□□□□□ -0.6
ZNF3-205	ENST00000413658	PCBP1	Q15365	356 aa	Known RBP eCLIP	11.32	□□□□□ -0.6
ZNF3-205	ENST00000413658	KMT5B	Q4FZB7	885 aa		11.32	□□□□□ -0.6
ZNF3-205	ENST00000413658	TMEM240	Q5SV17	173 aa		11.32	□□□□□ -0.6
ZNF3-205	ENST00000413658	NT5DC1	Q5TFE4	455 aa		11.32	□□□□□ -0.6
ZNF3-205	ENST00000413658	CNKSR3	Q6P9H4	555 aa		11.32	□□□□□ -0.6
ZNF3-205	ENST00000413658	EPM2AIP1	Q7L775	607 aa	Predicted RBP	11.32	□□□□□ -0.6
ZNF3-205	ENST00000413658	ZNF720	Q7Z2F6	126 aa		11.32	□□□□□ -0.6
ZNF3-205	ENST00000413658	HAUS6	Q7Z4H7	955 aa		11.32	□□□□□ -0.6
ZNF3-205	ENST00000413658	ZBTB8OS	Q8IWT0	167 aa		11.32	□□□□□ -0.6
ZNF3-205	ENST00000413658	FAM178B	Q8IXR5	827 aa		11.32	□□□□□ -0.6
ZNF3-205	ENST00000413658	RPUSD2	Q8IZ73	545 aa	Known RBP	11.32	□□□□□ -0.6
ZNF3-205	ENST00000413658	LBHD1	Q9BQE6	289 aa	Predicted RBP	11.32	□□□□□ -0.6
ZNF3-205	ENST00000413658	MFRP	Q9BY79	579 aa		11.32	□□□□□ -0.6
ZNF3-205	ENST00000413658	INO80B	Q9C086	356 aa	Predicted RBP	11.32	□□□□□ -0.6
ZNF3-205	ENST00000413658	CLSTN2	Q9H4D0	955 aa		11.32	□□□□□ -0.6
ZNF3-205	ENST00000413658	TBC1D7	Q9P0N9	293 aa		11.32	□□□□□ -0.6
ZNF3-205	ENST00000413658	KCNG1	Q9UIX4	513 aa		11.32	□□□□□ -0.6
ZNF3-205	ENST00000413658	PHLPP2	Q6ZVD8	1323 aa		11.31	□□□□□ -0.6
ZNF3-205	ENST00000413658	DENND3	A2RUS2	1198 aa		11.31	□□□□□ -0.6
ZNF3-205	ENST00000413658	GPR182	O15218	404 aa		11.31	□□□□□ -0.6
ZNF3-205	ENST00000413658	RHOBTB3	O94955	611 aa		11.31	□□□□□ -0.6
ZNF3-205	ENST00000413658	PRKCB	P05771	671 aa		11.31	□□□□□ -0.6
ZNF3-205	ENST00000413658	MYB	P10242	640 aa		11.31	□□□□□ -0.6
ZNF3-205	ENST00000413658	SFPQ	P23246	707 aa	Known RBP eCLIP	11.31	□□□□□ -0.6
ZNF3-205	ENST00000413658	HOXD13	P35453	343 aa		11.31	□□□□□ -0.6
ZNF3-205	ENST00000413658	KCNB1	Q14721	858 aa		11.31	□□□□□ -0.6
ZNF3-205	ENST00000413658	ZC2HC1C	Q53FD0	456 aa	Predicted RBP	11.31	□□□□□ -0.6
ZNF3-205	ENST00000413658	ZNF365	Q70YC5	407 aa		11.31	□□□□□ -0.6
ZNF3-205	ENST00000413658	CATSPER4	Q7RTX7	472 aa		11.31	□□□□□ -0.6
ZNF3-205	ENST00000413658	KIAA0895	Q8NCT3	520 aa		11.31	□□□□□ -0.6
ZNF3-205	ENST00000413658	SEPT8	Q92599	483 aa		11.31	□□□□□ -0.6
ZNF3-205	ENST00000413658	APBB2	Q92870	758 aa		11.31	□□□□□ -0.6
ZNF3-205	ENST00000413658	PRIMPOL	Q96LW4	560 aa		11.31	□□□□□ -0.6
ZNF3-205	ENST00000413658	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	11.31	□□□□□ -0.6
ZNF3-205	ENST00000413658	PRO3102	Q9H379	93 aa		11.31	□□□□□ -0.6
ZNF3-205	ENST00000413658	MRPL44	Q9H9J2	332 aa	Known RBP	11.31	□□□□□ -0.6
ZNF3-205	ENST00000413658	AGPAT5	Q9NUQ2	364 aa		11.31	□□□□□ -0.6
ZNF3-205	ENST00000413658	PRMT7	Q9NVM4	692 aa	Predicted RBP	11.31	□□□□□ -0.6
ZNF3-205	ENST00000413658	USP20	Q9Y2K6	914 aa		11.31	□□□□□ -0.6
ZNF3-205	ENST00000413658	PCDHA5	Q9Y5H7	936 aa		11.31	□□□□□ -0.6
ZNF3-205	ENST00000413658	CIT	O14578	2027 aa		11.31	□□□□□ -0.6
ZNF3-205	ENST00000413658	CNTNAP2	Q9UHC6	1331 aa		11.3	□□□□□ -0.6
ZNF3-205	ENST00000413658	FNDC1	Q4ZHG4	1894 aa	Predicted RBP	11.3	□□□□□ -0.6
ZNF3-205	ENST00000413658	LOC101059915	A0A1B0GWI6	518 aa	Predicted RBP	11.3	□□□□□ -0.6
ZNF3-205	ENST00000413658		K7ENM7	598 aa		11.3	□□□□□ -0.6
ZNF3-205	ENST00000413658		K7ERI5	159 aa		11.3	□□□□□ -0.6
ZNF3-205	ENST00000413658	ACKR2	O00590	384 aa		11.3	□□□□□ -0.6
ZNF3-205	ENST00000413658	MBD3	O95983	291 aa		11.3	□□□□□ -0.6
ZNF3-205	ENST00000413658	ARF4	P18085	180 aa	Predicted RBP	11.3	□□□□□ -0.6

Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms