RNA–Protein interactions for RNA: ENST00000413354.5

MCF2L-211, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-211ENST00000413354 DNAJB1P25685 340 aa17.38■□□□□ 0.37
MCF2L-211ENST00000413354 NAMPTP43490 491 aa17.38■□□□□ 0.37
MCF2L-211ENST00000413354 ALDH7A1P49419 539 aaKnown RBP17.38■□□□□ 0.37
MCF2L-211ENST00000413354 RNASELQ05823 741 aaKnown RBP17.38■□□□□ 0.37
MCF2L-211ENST00000413354 HYAL1Q12794 435 aa17.38■□□□□ 0.37
MCF2L-211ENST00000413354 EP400NLQ6ZTU2 488 aa17.38■□□□□ 0.37
MCF2L-211ENST00000413354 KCTD17Q8N5Z5 321 aa17.38■□□□□ 0.37
MCF2L-211ENST00000413354 MRPS27Q92552 414 aaKnown RBP17.38■□□□□ 0.37
MCF2L-211ENST00000413354 KIFAP3Q92845 792 aa17.38■□□□□ 0.37
MCF2L-211ENST00000413354 INTS4Q96HW7 963 aaKnown RBP17.38■□□□□ 0.37
MCF2L-211ENST00000413354 IFT74Q96LB3 600 aa17.38■□□□□ 0.37
MCF2L-211ENST00000413354 TRIM6Q9C030 488 aaPredicted RBP17.38■□□□□ 0.37
MCF2L-211ENST00000413354 CSRNP2Q9H175 543 aa17.38■□□□□ 0.37
MCF2L-211ENST00000413354 KANSL3Q9P2N6 904 aa17.38■□□□□ 0.37
MCF2L-211ENST00000413354 DAXXQ9UER7 740 aaPredicted RBP17.38■□□□□ 0.37
MCF2L-211ENST00000413354 DNM3Q9UQ16 869 aa17.38■□□□□ 0.37
MCF2L-211ENST00000413354 FAM50BQ9Y247 325 aa17.38■□□□□ 0.37
MCF2L-211ENST00000413354 INPP5FQ9Y2H2 1132 aa17.38■□□□□ 0.37
MCF2L-211ENST00000413354 VPS37CA5D8V6 355 aaPredicted RBP17.37■□□□□ 0.37
MCF2L-211ENST00000413354 OFD1O75665 1012 aa17.37■□□□□ 0.37
MCF2L-211ENST00000413354 EYA4O95677 639 aa17.37■□□□□ 0.37
MCF2L-211ENST00000413354 ECM1Q16610 540 aa17.37■□□□□ 0.37
MCF2L-211ENST00000413354 AMHR2Q16671 573 aa17.37■□□□□ 0.37
MCF2L-211ENST00000413354 UBXN11Q5T124 520 aa17.37■□□□□ 0.37
MCF2L-211ENST00000413354 PPP4R3CPQ6ZMV5 832 aa17.37■□□□□ 0.37
MCF2L-211ENST00000413354 DEPTORQ8TB45 409 aa17.37■□□□□ 0.37
MCF2L-211ENST00000413354 MICAL1Q8TDZ2 1067 aa17.37■□□□□ 0.37
MCF2L-211ENST00000413354 CDCA3Q99618 268 aaPredicted RBP17.37■□□□□ 0.37
MCF2L-211ENST00000413354 NT5C3AQ9H0P0 336 aa17.37■□□□□ 0.37
MCF2L-211ENST00000413354 TBC1D13Q9NVG8 400 aa17.37■□□□□ 0.37
MCF2L-211ENST00000413354 VCANP13611 3396 aa17.36■□□□□ 0.37
MCF2L-211ENST00000413354 PP2D1A8MPX8 630 aa17.36■□□□□ 0.37
MCF2L-211ENST00000413354 K7ELQ4 463 aaPredicted RBP17.36■□□□□ 0.37
MCF2L-211ENST00000413354 TNFRSF10AO00220 468 aa17.36■□□□□ 0.37
MCF2L-211ENST00000413354 SLC26A4O43511 780 aa17.36■□□□□ 0.37
MCF2L-211ENST00000413354 ZC3H11AO75152 810 aaKnown RBP eCLIP17.36■□□□□ 0.37
MCF2L-211ENST00000413354 ITGA4P13612 1032 aa17.36■□□□□ 0.37
MCF2L-211ENST00000413354 ARF4P18085 180 aaPredicted RBP17.36■□□□□ 0.37
MCF2L-211ENST00000413354 IRS1P35568 1242 aa17.36■□□□□ 0.37
MCF2L-211ENST00000413354 BCAR1P56945 870 aa17.36■□□□□ 0.37
MCF2L-211ENST00000413354 BMS1Q14692 1282 aaKnown RBP17.36■□□□□ 0.37
MCF2L-211ENST00000413354 IL17AQ16552 155 aa17.36■□□□□ 0.37
MCF2L-211ENST00000413354 FAM187BQ17R55 369 aa17.36■□□□□ 0.37
MCF2L-211ENST00000413354 CTC1Q2NKJ3 1217 aa17.36■□□□□ 0.37
MCF2L-211ENST00000413354 LONRF3Q496Y0 759 aa17.36■□□□□ 0.37
MCF2L-211ENST00000413354 SLC27A1Q6PCB7 646 aa17.36■□□□□ 0.37
MCF2L-211ENST00000413354 AGMOQ6ZNB7 445 aa17.36■□□□□ 0.37
MCF2L-211ENST00000413354 SLC39A11Q8N1S5 342 aa17.36■□□□□ 0.37
MCF2L-211ENST00000413354 TMEM169Q96HH4 297 aa17.36■□□□□ 0.37
MCF2L-211ENST00000413354 CPB2Q96IY4 423 aa17.36■□□□□ 0.37
MCF2L-211ENST00000413354 CDK5RAP3Q96JB5 506 aa17.36■□□□□ 0.37
MCF2L-211ENST00000413354 NGRNQ9NPE2 291 aaKnown RBP17.36■□□□□ 0.37
MCF2L-211ENST00000413354 ENTPD7Q9NQZ7 604 aa17.36■□□□□ 0.37
MCF2L-211ENST00000413354 IPPQ9Y573 584 aa17.36■□□□□ 0.37
MCF2L-211ENST00000413354 ZMYM2Q9UBW7 1377 aa17.36■□□□□ 0.37
MCF2L-211ENST00000413354 SPTBN5Q9NRC6 3674 aaKnown RBP17.35■□□□□ 0.37
MCF2L-211ENST00000413354 VWA3AA6NCI4 1184 aa17.35■□□□□ 0.37
MCF2L-211ENST00000413354 MEIS3P2A8K0S8 358 aa17.35■□□□□ 0.37
MCF2L-211ENST00000413354 FSCN2O14926 492 aa17.35■□□□□ 0.37
MCF2L-211ENST00000413354 PBX3P40426 434 aa17.35■□□□□ 0.37
MCF2L-211ENST00000413354 MAPK6Q16659 721 aa17.35■□□□□ 0.37
MCF2L-211ENST00000413354 HYIQ5T013 277 aa17.35■□□□□ 0.37
MCF2L-211ENST00000413354 PTCRAQ6ISU1 281 aaPredicted RBP17.35■□□□□ 0.37
MCF2L-211ENST00000413354 EFHBQ8N7U6 833 aa17.35■□□□□ 0.37
MCF2L-211ENST00000413354 AK8Q96MA6 479 aa17.35■□□□□ 0.37
MCF2L-211ENST00000413354 FAM193BQ96PV7 902 aaPredicted RBP17.35■□□□□ 0.37
MCF2L-211ENST00000413354 TIPINQ9BVW5 301 aa17.35■□□□□ 0.37
MCF2L-211ENST00000413354 EIF2AQ9BY44 585 aaKnown RBP17.35■□□□□ 0.37
MCF2L-211ENST00000413354 IGFLR1Q9H665 355 aa17.35■□□□□ 0.37
MCF2L-211ENST00000413354 STK39Q9UEW8 545 aa17.35■□□□□ 0.37
MCF2L-211ENST00000413354 GTF3C3Q9Y5Q9 886 aa17.35■□□□□ 0.37
MCF2L-211ENST00000413354 H3BQ06 376 aaPredicted RBP17.34■□□□□ 0.37
MCF2L-211ENST00000413354 N4BP3O15049 544 aa17.34■□□□□ 0.37
MCF2L-211ENST00000413354 PRKCBP05771 671 aa17.34■□□□□ 0.37
MCF2L-211ENST00000413354 NRIP1P48552 1158 aa17.34■□□□□ 0.37
MCF2L-211ENST00000413354 NDUFV1P49821 464 aa17.34■□□□□ 0.37
MCF2L-211ENST00000413354 EFNA5P52803 228 aa17.34■□□□□ 0.37
MCF2L-211ENST00000413354 TMEM132AQ24JP5 1023 aa17.34■□□□□ 0.37
MCF2L-211ENST00000413354 PLPP4Q5VZY2 271 aa17.34■□□□□ 0.37
MCF2L-211ENST00000413354 PHLPP2Q6ZVD8 1323 aa17.34■□□□□ 0.37
MCF2L-211ENST00000413354 ADGRD2Q7Z7M1 963 aa17.34■□□□□ 0.37
MCF2L-211ENST00000413354 SMG8Q8ND04 991 aaKnown RBP17.34■□□□□ 0.37
MCF2L-211ENST00000413354 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.34■□□□□ 0.37
MCF2L-211ENST00000413354 BSNDQ8WZ55 320 aa17.34■□□□□ 0.37
MCF2L-211ENST00000413354 DRC1Q96MC2 740 aa17.34■□□□□ 0.37
MCF2L-211ENST00000413354 TCF25Q9BQ70 676 aa17.34■□□□□ 0.37
MCF2L-211ENST00000413354 TMEM175Q9BSA9 504 aa17.34■□□□□ 0.37
MCF2L-211ENST00000413354 MMTAG2Q9BU76 263 aaKnown RBP17.34■□□□□ 0.37
MCF2L-211ENST00000413354 FZD8Q9H461 694 aa17.34■□□□□ 0.37
MCF2L-211ENST00000413354 NRDE2Q9H7Z3 1164 aa17.34■□□□□ 0.37
MCF2L-211ENST00000413354 TLE6Q9H808 572 aa17.34■□□□□ 0.37
MCF2L-211ENST00000413354 GIT1Q9Y2X7 761 aa17.34■□□□□ 0.37
MCF2L-211ENST00000413354 A0A1B0GUA9 196 aa17.33■□□□□ 0.36
MCF2L-211ENST00000413354 E9PMD0 336 aa17.33■□□□□ 0.36
MCF2L-211ENST00000413354 INPPL1O15357 1258 aa17.33■□□□□ 0.36
MCF2L-211ENST00000413354 B4GALT5O43286 388 aa17.33■□□□□ 0.36
MCF2L-211ENST00000413354 SRGAP2BP0DMP2 458 aa17.33■□□□□ 0.36
MCF2L-211ENST00000413354 CDC25AP30304 524 aa17.33■□□□□ 0.36
MCF2L-211ENST00000413354 ERVFC1P60507 584 aa17.33■□□□□ 0.36
MCF2L-211ENST00000413354 DMP1Q13316 513 aaPredicted RBP17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms