RNA–Protein interactions for RNA: ENST00000409854.5

EPHA4-202, Transcript of EPH receptor A4, humanhuman

TSL 1 (best) BASIC

Gene EPHA4, Length 3,454 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-202ENST00000409854 NKX3-2P78367 333 aa6.02□□□□□ -1.44
EPHA4-202ENST00000409854 POU5F1BQ06416 359 aa6.02□□□□□ -1.44
EPHA4-202ENST00000409854 DGKDQ16760 1214 aa6.02□□□□□ -1.44
EPHA4-202ENST00000409854 DEFB115Q30KQ5 88 aa6.02□□□□□ -1.44
EPHA4-202ENST00000409854 WDR59Q6PJI9 974 aa6.02□□□□□ -1.44
EPHA4-202ENST00000409854 IFNLR1Q8IU57 520 aaPredicted RBP6.02□□□□□ -1.44
EPHA4-202ENST00000409854 TMTC1Q8IUR5 882 aa6.02□□□□□ -1.44
EPHA4-202ENST00000409854 YY1AP1Q9H869 796 aa6.02□□□□□ -1.44
EPHA4-202ENST00000409854 AGPAT5Q9NUQ2 364 aa6.02□□□□□ -1.44
EPHA4-202ENST00000409854 TMEM51Q9NW97 253 aa6.02□□□□□ -1.44
EPHA4-202ENST00000409854 CEP72Q9P209 647 aa6.02□□□□□ -1.44
EPHA4-202ENST00000409854 TRPC6Q9Y210 931 aa6.02□□□□□ -1.44
EPHA4-202ENST00000409854 USP27XA6NNY8 438 aa6.02□□□□□ -1.45
EPHA4-202ENST00000409854 H3BRB1 525 aa6.02□□□□□ -1.45
EPHA4-202ENST00000409854 MAGEB2O15479 319 aa6.02□□□□□ -1.45
EPHA4-202ENST00000409854 ASAP2O43150 1006 aa6.02□□□□□ -1.45
EPHA4-202ENST00000409854 AOC2O75106 756 aa6.02□□□□□ -1.45
EPHA4-202ENST00000409854 F2P00734 622 aa6.02□□□□□ -1.45
EPHA4-202ENST00000409854 EDN1P05305 212 aa6.02□□□□□ -1.45
EPHA4-202ENST00000409854 ADRB2P07550 413 aa6.02□□□□□ -1.45
EPHA4-202ENST00000409854 ZNF286BP0CG31 522 aa6.02□□□□□ -1.45
EPHA4-202ENST00000409854 INSRRP14616 1297 aa6.02□□□□□ -1.45
EPHA4-202ENST00000409854 APLP1P51693 650 aa6.02□□□□□ -1.45
EPHA4-202ENST00000409854 EFNA5P52803 228 aa6.02□□□□□ -1.45
EPHA4-202ENST00000409854 LAMTOR4Q0VGL1 99 aa6.02□□□□□ -1.45
EPHA4-202ENST00000409854 PRAMEF19Q5SWL8 479 aa6.02□□□□□ -1.45
EPHA4-202ENST00000409854 C1orf220Q5T0J3 134 aa6.02□□□□□ -1.45
EPHA4-202ENST00000409854 RAD9BQ6WBX8 426 aa6.02□□□□□ -1.45
EPHA4-202ENST00000409854 NYAP1Q6ZVC0 841 aa6.02□□□□□ -1.45
EPHA4-202ENST00000409854 TLK2Q86UE8 772 aa6.02□□□□□ -1.45
EPHA4-202ENST00000409854 DEPTORQ8TB45 409 aa6.02□□□□□ -1.45
EPHA4-202ENST00000409854 TRAPPC12Q8WVT3 735 aa6.02□□□□□ -1.45
EPHA4-202ENST00000409854 PRPF31Q8WWY3 499 aaKnown RBP6.02□□□□□ -1.45
EPHA4-202ENST00000409854 PSPC1Q8WXF1 523 aaKnown RBP6.02□□□□□ -1.45
EPHA4-202ENST00000409854 TUT1Q9H6E5 874 aaKnown RBP6.02□□□□□ -1.45
EPHA4-202ENST00000409854 SIX2Q9NPC8 291 aa6.02□□□□□ -1.45
EPHA4-202ENST00000409854 PLAGL2Q9UPG8 496 aa6.02□□□□□ -1.45
EPHA4-202ENST00000409854 USP20Q9Y2K6 914 aa6.02□□□□□ -1.45
EPHA4-202ENST00000409854 DAAM1Q9Y4D1 1078 aa6.02□□□□□ -1.45
EPHA4-202ENST00000409854 SOWAHDA6NJG2 315 aa6.02□□□□□ -1.45
EPHA4-202ENST00000409854 HAS3O00219 553 aa6.02□□□□□ -1.45
EPHA4-202ENST00000409854 P4HA2O15460 535 aa6.02□□□□□ -1.45
EPHA4-202ENST00000409854 CCP110O43303 1012 aa6.02□□□□□ -1.45
EPHA4-202ENST00000409854 MSCO60682 206 aa6.02□□□□□ -1.45
EPHA4-202ENST00000409854 CYBAP13498 195 aa6.02□□□□□ -1.45
EPHA4-202ENST00000409854 PON1P27169 355 aa6.02□□□□□ -1.45
EPHA4-202ENST00000409854 HOXD11P31277 338 aaPredicted RBP6.02□□□□□ -1.45
EPHA4-202ENST00000409854 CYP2C19P33261 490 aa6.02□□□□□ -1.45
EPHA4-202ENST00000409854 PSMC4P43686 418 aa6.02□□□□□ -1.45
EPHA4-202ENST00000409854 FMO5P49326 533 aa6.02□□□□□ -1.45
EPHA4-202ENST00000409854 DCAF17Q5H9S7 520 aaPredicted RBP6.02□□□□□ -1.45
EPHA4-202ENST00000409854 CYP26C1Q6V0L0 522 aa6.02□□□□□ -1.45
EPHA4-202ENST00000409854 ZPBP2Q6X784 338 aa6.02□□□□□ -1.45
EPHA4-202ENST00000409854 ZSWIM2Q8NEG5 633 aa6.02□□□□□ -1.45
EPHA4-202ENST00000409854 NEK11Q8NG66 645 aa6.02□□□□□ -1.45
EPHA4-202ENST00000409854 PLEKHO2Q8TD55 490 aa6.02□□□□□ -1.45
EPHA4-202ENST00000409854 TMC2Q8TDI7 906 aa6.02□□□□□ -1.45
EPHA4-202ENST00000409854 SYN2Q92777 582 aaPredicted RBP6.02□□□□□ -1.45
EPHA4-202ENST00000409854 MFSD14AQ96MC6 490 aa6.02□□□□□ -1.45
EPHA4-202ENST00000409854 ARHGAP39Q9C0H5 1083 aa6.02□□□□□ -1.45
EPHA4-202ENST00000409854 C2orf40Q9H1Z8 148 aa6.02□□□□□ -1.45
EPHA4-202ENST00000409854 PCIF1Q9H4Z3 704 aa6.02□□□□□ -1.45
EPHA4-202ENST00000409854 LRRIQ4A6NIV6 560 aa6.01□□□□□ -1.45
EPHA4-202ENST00000409854 HNRNPDLO14979 420 aaKnown RBP6.01□□□□□ -1.45
EPHA4-202ENST00000409854 OFD1O75665 1012 aa6.01□□□□□ -1.45
EPHA4-202ENST00000409854 VAMP7P51809 220 aa6.01□□□□□ -1.45
EPHA4-202ENST00000409854 STRN3Q13033 797 aa6.01□□□□□ -1.45
EPHA4-202ENST00000409854 SNRNP35Q16560 246 aaKnown RBP6.01□□□□□ -1.45
EPHA4-202ENST00000409854 MARCH8Q5T0T0 291 aa6.01□□□□□ -1.45
EPHA4-202ENST00000409854 PDXDC1Q6P996 788 aa6.01□□□□□ -1.45
EPHA4-202ENST00000409854 MTHFD1LQ6UB35 978 aa6.01□□□□□ -1.45
EPHA4-202ENST00000409854 GBP6Q6ZN66 633 aa6.01□□□□□ -1.45
EPHA4-202ENST00000409854 GPD1LQ8N335 351 aa6.01□□□□□ -1.45
EPHA4-202ENST00000409854 TRPV1Q8NER1 839 aa6.01□□□□□ -1.45
EPHA4-202ENST00000409854 ZNF397Q8NF99 534 aaPredicted RBP6.01□□□□□ -1.45
EPHA4-202ENST00000409854 KAT2BQ92831 832 aa6.01□□□□□ -1.45
EPHA4-202ENST00000409854 PPP1R13BQ96KQ4 1090 aa6.01□□□□□ -1.45
EPHA4-202ENST00000409854 LSM14BQ9BX40 385 aaKnown RBP6.01□□□□□ -1.45
EPHA4-202ENST00000409854 HAPLN2Q9GZV7 340 aa6.01□□□□□ -1.45
EPHA4-202ENST00000409854 NUCKS1Q9H1E3 243 aaKnown RBP6.01□□□□□ -1.45
EPHA4-202ENST00000409854 MMRN2Q9H8L6 949 aa6.01□□□□□ -1.45
EPHA4-202ENST00000409854 FAM207AQ9NSI2 230 aaPredicted RBP6.01□□□□□ -1.45
EPHA4-202ENST00000409854 MYO6Q9UM54 1294 aa6.01□□□□□ -1.45
EPHA4-202ENST00000409854 CITO14578 2027 aa6.01□□□□□ -1.45
EPHA4-202ENST00000409854 K7ERI5 159 aa6.01□□□□□ -1.45
EPHA4-202ENST00000409854 ABLIM1O14639 778 aa6.01□□□□□ -1.45
EPHA4-202ENST00000409854 FAM189A1O60320 539 aa6.01□□□□□ -1.45
EPHA4-202ENST00000409854 N4BP1O75113 896 aaKnown RBP6.01□□□□□ -1.45
EPHA4-202ENST00000409854 KRT13P13646 458 aa6.01□□□□□ -1.45
EPHA4-202ENST00000409854 PROZP22891 400 aa6.01□□□□□ -1.45
EPHA4-202ENST00000409854 CPT1AP50416 773 aa6.01□□□□□ -1.45
EPHA4-202ENST00000409854 CLDN10P78369 228 aa6.01□□□□□ -1.45
EPHA4-202ENST00000409854 CAP1Q01518 475 aa6.01□□□□□ -1.45
EPHA4-202ENST00000409854 TFDP1Q14186 410 aa6.01□□□□□ -1.45
EPHA4-202ENST00000409854 MTF1Q14872 753 aa6.01□□□□□ -1.45
EPHA4-202ENST00000409854 FAM187BQ17R55 369 aa6.01□□□□□ -1.45
EPHA4-202ENST00000409854 EXOC3L4Q17RC7 722 aa6.01□□□□□ -1.45
EPHA4-202ENST00000409854 CBWD6Q4V339 395 aa6.01□□□□□ -1.45
EPHA4-202ENST00000409854 CBWD3Q5JTY5 395 aa6.01□□□□□ -1.45
EPHA4-202ENST00000409854 CBWD5Q5RIA9 395 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms