RNA–Protein interactions for RNA: ENST00000409022.2

PTPN18-203, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 3

Gene PTPN18, Length 993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-203ENST00000409022 MAEAQ7L5Y9 396 aa20.52■□□□□ 0.88
PTPN18-203ENST00000409022 SLC39A11Q8N1S5 342 aa20.52■□□□□ 0.88
PTPN18-203ENST00000409022 SNX29Q8TEQ0 813 aa20.52■□□□□ 0.88
PTPN18-203ENST00000409022 LPPQ93052 612 aa20.52■□□□□ 0.88
PTPN18-203ENST00000409022 PRIMPOLQ96LW4 560 aa20.52■□□□□ 0.88
PTPN18-203ENST00000409022 NECAB3Q96P71 396 aaPredicted RBP20.52■□□□□ 0.88
PTPN18-203ENST00000409022 FAM193BQ96PV7 902 aaPredicted RBP20.52■□□□□ 0.88
PTPN18-203ENST00000409022 TCF25Q9BQ70 676 aa20.52■□□□□ 0.88
PTPN18-203ENST00000409022 PRMT7Q9NVM4 692 aaPredicted RBP20.52■□□□□ 0.88
PTPN18-203ENST00000409022 XIRP2A4UGR9 3374 aa20.51■□□□□ 0.87
PTPN18-203ENST00000409022 ZC3H11AO75152 810 aaKnown RBP eCLIP20.51■□□□□ 0.87
PTPN18-203ENST00000409022 OFD1O75665 1012 aa20.51■□□□□ 0.87
PTPN18-203ENST00000409022 CD2BP2O95400 341 aaKnown RBP20.51■□□□□ 0.87
PTPN18-203ENST00000409022 NCLP19338 710 aaKnown RBP20.51■□□□□ 0.87
PTPN18-203ENST00000409022 BCAR1P56945 870 aa20.51■□□□□ 0.87
PTPN18-203ENST00000409022 MBTD1Q05BQ5 628 aa20.51■□□□□ 0.87
PTPN18-203ENST00000409022 LONRF3Q496Y0 759 aa20.51■□□□□ 0.87
PTPN18-203ENST00000409022 TMC7Q7Z402 723 aa20.51■□□□□ 0.87
PTPN18-203ENST00000409022 RBM23Q86U06 439 aaKnown RBP20.51■□□□□ 0.87
PTPN18-203ENST00000409022 IGSF22Q8N9C0 903 aa20.51■□□□□ 0.87
PTPN18-203ENST00000409022 TMEM87AQ8NBN3 555 aa20.51■□□□□ 0.87
PTPN18-203ENST00000409022 IFT74Q96LB3 600 aa20.51■□□□□ 0.87
PTPN18-203ENST00000409022 CSRNP2Q9H175 543 aa20.51■□□□□ 0.87
PTPN18-203ENST00000409022 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.51■□□□□ 0.87
PTPN18-203ENST00000409022 TBC1D13Q9NVG8 400 aa20.51■□□□□ 0.87
PTPN18-203ENST00000409022 PRKAG3Q9UGI9 489 aa20.51■□□□□ 0.87
PTPN18-203ENST00000409022 CD207Q9UJ71 328 aa20.51■□□□□ 0.87
PTPN18-203ENST00000409022 KIAA1024Q9UPX6 916 aa20.51■□□□□ 0.87
PTPN18-203ENST00000409022 DNM3Q9UQ16 869 aa20.51■□□□□ 0.87
PTPN18-203ENST00000409022 A0A087WWV3 80 aa20.5■□□□□ 0.87
PTPN18-203ENST00000409022 FSCN2O14926 492 aa20.5■□□□□ 0.87
PTPN18-203ENST00000409022 PDCP20941 246 aa20.5■□□□□ 0.87
PTPN18-203ENST00000409022 ERVFC1P60507 584 aa20.5■□□□□ 0.87
PTPN18-203ENST00000409022 SMC1AQ14683 1233 aaKnown RBP20.5■□□□□ 0.87
PTPN18-203ENST00000409022 TMEM132AQ24JP5 1023 aa20.5■□□□□ 0.87
PTPN18-203ENST00000409022 ADGRD2Q7Z7M1 963 aa20.5■□□□□ 0.87
PTPN18-203ENST00000409022 KCTD17Q8N5Z5 321 aa20.5■□□□□ 0.87
PTPN18-203ENST00000409022 DEPTORQ8TB45 409 aa20.5■□□□□ 0.87
PTPN18-203ENST00000409022 KIFAP3Q92845 792 aa20.5■□□□□ 0.87
PTPN18-203ENST00000409022 NR1I2O75469 434 aa20.49■□□□□ 0.87
PTPN18-203ENST00000409022 IL9P15248 144 aa20.49■□□□□ 0.87
PTPN18-203ENST00000409022 SSTR3P32745 418 aaPredicted RBP20.49■□□□□ 0.87
PTPN18-203ENST00000409022 LTBRP36941 435 aa20.49■□□□□ 0.87
PTPN18-203ENST00000409022 PBX3P40426 434 aa20.49■□□□□ 0.87
PTPN18-203ENST00000409022 NAMPTP43490 491 aa20.49■□□□□ 0.87
PTPN18-203ENST00000409022 SMAD4Q13485 552 aaKnown RBP20.49■□□□□ 0.87
PTPN18-203ENST00000409022 GIT2Q14161 759 aa20.49■□□□□ 0.87
PTPN18-203ENST00000409022 UBXN11Q5T124 520 aa20.49■□□□□ 0.87
PTPN18-203ENST00000409022 PLPP4Q5VZY2 271 aa20.49■□□□□ 0.87
PTPN18-203ENST00000409022 SLC27A1Q6PCB7 646 aa20.49■□□□□ 0.87
PTPN18-203ENST00000409022 POP1Q99575 1024 aaKnown RBP20.49■□□□□ 0.87
PTPN18-203ENST00000409022 TMEM175Q9BSA9 504 aa20.49■□□□□ 0.87
PTPN18-203ENST00000409022 BHMT2Q9H2M3 363 aa20.49■□□□□ 0.87
PTPN18-203ENST00000409022 GPRC5CQ9NQ84 441 aa20.49■□□□□ 0.87
PTPN18-203ENST00000409022 DDX19AQ9NUU7 478 aaKnown RBP20.49■□□□□ 0.87
PTPN18-203ENST00000409022 IPPQ9Y573 584 aa20.49■□□□□ 0.87
PTPN18-203ENST00000409022 FNDC1Q4ZHG4 1894 aaPredicted RBP20.49■□□□□ 0.87
PTPN18-203ENST00000409022 REV3LO60673 3130 aa20.48■□□□□ 0.87
PTPN18-203ENST00000409022 BMP15O95972 392 aa20.48■□□□□ 0.87
PTPN18-203ENST00000409022 ARF4P18085 180 aaPredicted RBP20.48■□□□□ 0.87
PTPN18-203ENST00000409022 GTF2F1P35269 517 aaKnown RBP eCLIP20.48■□□□□ 0.87
PTPN18-203ENST00000409022 ATP2C1P98194 919 aaPredicted RBP20.48■□□□□ 0.87
PTPN18-203ENST00000409022 MAPK6Q16659 721 aa20.48■□□□□ 0.87
PTPN18-203ENST00000409022 DUSP6Q16828 381 aa20.48■□□□□ 0.87
PTPN18-203ENST00000409022 ARL6IP4Q66PJ3 421 aaKnown RBP20.48■□□□□ 0.87
PTPN18-203ENST00000409022 CDCA2Q69YH5 1023 aaPredicted RBP20.48■□□□□ 0.87
PTPN18-203ENST00000409022 PPP4R3CPQ6ZMV5 832 aa20.48■□□□□ 0.87
PTPN18-203ENST00000409022 AGMOQ6ZNB7 445 aa20.48■□□□□ 0.87
PTPN18-203ENST00000409022 FAM178BQ8IXR5 827 aa20.48■□□□□ 0.87
PTPN18-203ENST00000409022 GJD3Q8N144 294 aa20.48■□□□□ 0.87
PTPN18-203ENST00000409022 CPB2Q96IY4 423 aa20.48■□□□□ 0.87
PTPN18-203ENST00000409022 GBP3Q9H0R5 595 aa20.48■□□□□ 0.87
PTPN18-203ENST00000409022 BRWD1Q9NSI6 2320 aa20.47■□□□□ 0.87
PTPN18-203ENST00000409022 TBX10O75333 385 aa20.47■□□□□ 0.87
PTPN18-203ENST00000409022 ALDH2P05091 517 aa20.47■□□□□ 0.87
PTPN18-203ENST00000409022 CA8P35219 290 aa20.47■□□□□ 0.87
PTPN18-203ENST00000409022 EFNA5P52803 228 aa20.47■□□□□ 0.87
PTPN18-203ENST00000409022 AMHR2Q16671 573 aa20.47■□□□□ 0.87
PTPN18-203ENST00000409022 FAM187BQ17R55 369 aa20.47■□□□□ 0.87
PTPN18-203ENST00000409022 BRAPQ7Z569 592 aa20.47■□□□□ 0.87
PTPN18-203ENST00000409022 APBB1IPQ7Z5R6 666 aaPredicted RBP20.47■□□□□ 0.87
PTPN18-203ENST00000409022 CDK5RAP3Q96JB5 506 aa20.47■□□□□ 0.87
PTPN18-203ENST00000409022 C1QTNF1Q9BXJ1 281 aa20.47■□□□□ 0.87
PTPN18-203ENST00000409022 NT5C3AQ9H0P0 336 aa20.47■□□□□ 0.87
PTPN18-203ENST00000409022 NRDE2Q9H7Z3 1164 aa20.47■□□□□ 0.87
PTPN18-203ENST00000409022 GIT1Q9Y2X7 761 aa20.47■□□□□ 0.87
PTPN18-203ENST00000409022 PHLPP2Q6ZVD8 1323 aa20.47■□□□□ 0.87
PTPN18-203ENST00000409022 NCOR1O75376 2440 aa20.46■□□□□ 0.87
PTPN18-203ENST00000409022 A0A1B0GUA9 196 aa20.46■□□□□ 0.87
PTPN18-203ENST00000409022 MEIS3P2A8K0S8 358 aa20.46■□□□□ 0.87
PTPN18-203ENST00000409022 NT5C1B-RDH14C9J2C7 533 aa20.46■□□□□ 0.87
PTPN18-203ENST00000409022 N4BP3O15049 544 aa20.46■□□□□ 0.87
PTPN18-203ENST00000409022 PER2O15055 1255 aa20.46■□□□□ 0.87
PTPN18-203ENST00000409022 LINC01565O15544 149 aa20.46■□□□□ 0.87
PTPN18-203ENST00000409022 EYA4O95677 639 aa20.46■□□□□ 0.87
PTPN18-203ENST00000409022 GALTP07902 379 aa20.46■□□□□ 0.87
PTPN18-203ENST00000409022 COASYQ13057 564 aa20.46■□□□□ 0.87
PTPN18-203ENST00000409022 PRPF4BQ13523 1007 aaKnown RBP20.46■□□□□ 0.87
PTPN18-203ENST00000409022 CLUL1Q15846 466 aa20.46■□□□□ 0.87
PTPN18-203ENST00000409022 DDX53Q86TM3 631 aaKnown RBP20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms