RNA–Protein interactions for RNA: ENST00000403904.5

CSNK1E-204, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CSNK1E, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-204ENST00000403904 PADI3Q9ULW8 664 aa36.58■■■■□ 3.45
CSNK1E-204ENST00000403904 TET1Q8NFU7 2136 aa36.58■■■■□ 3.45
CSNK1E-204ENST00000403904 TTLL13PA6NNM8 815 aa36.57■■■■□ 3.45
CSNK1E-204ENST00000403904 EIF3DO15371 548 aaKnown RBP eCLIP36.57■■■■□ 3.45
CSNK1E-204ENST00000403904 B4GALT5O43286 388 aa36.57■■■■□ 3.45
CSNK1E-204ENST00000403904 CAPN15O75808 1086 aa36.57■■■■□ 3.45
CSNK1E-204ENST00000403904 ERLIN2O94905 339 aa36.57■■■■□ 3.45
CSNK1E-204ENST00000403904 ABCD1P33897 745 aa36.57■■■■□ 3.45
CSNK1E-204ENST00000403904 PAK2Q13177 524 aa36.57■■■■□ 3.45
CSNK1E-204ENST00000403904 L1TD1Q5T7N2 865 aaKnown RBP36.57■■■■□ 3.45
CSNK1E-204ENST00000403904 MFSD5Q6N075 450 aa36.57■■■■□ 3.45
CSNK1E-204ENST00000403904 ZNF507Q8TCN5 953 aa36.57■■■■□ 3.45
CSNK1E-204ENST00000403904 ACKR2O00590 384 aa36.57■■■■□ 3.44
CSNK1E-204ENST00000403904 PARNO95453 639 aaKnown RBP36.57■■■■□ 3.44
CSNK1E-204ENST00000403904 FAM187BQ17R55 369 aa36.57■■■■□ 3.44
CSNK1E-204ENST00000403904 PPP4R3CPQ6ZMV5 832 aa36.57■■■■□ 3.44
CSNK1E-204ENST00000403904 MAP4K3Q8IVH8 894 aa36.57■■■■□ 3.44
CSNK1E-204ENST00000403904 NELFCDQ8IXH7 590 aa36.57■■■■□ 3.44
CSNK1E-204ENST00000403904 MYOCDQ8IZQ8 938 aa36.57■■■■□ 3.44
CSNK1E-204ENST00000403904 HVCN1Q96D96 273 aa36.57■■■■□ 3.44
CSNK1E-204ENST00000403904 IKZF4Q9H2S9 585 aa36.57■■■■□ 3.44
CSNK1E-204ENST00000403904 GPR182O15218 404 aa36.56■■■■□ 3.44
CSNK1E-204ENST00000403904 TSPAN1O60635 241 aa36.56■■■■□ 3.44
CSNK1E-204ENST00000403904 HOXD13P35453 343 aa36.56■■■■□ 3.44
CSNK1E-204ENST00000403904 PRCPP42785 496 aa36.56■■■■□ 3.44
CSNK1E-204ENST00000403904 PRPF4BQ13523 1007 aaKnown RBP36.56■■■■□ 3.44
CSNK1E-204ENST00000403904 ZSCAN23Q3MJ62 389 aa36.56■■■■□ 3.44
CSNK1E-204ENST00000403904 SASS6Q6UVJ0 657 aa36.56■■■■□ 3.44
CSNK1E-204ENST00000403904 DEFB128Q7Z7B8 93 aa36.56■■■■□ 3.44
CSNK1E-204ENST00000403904 PRIMPOLQ96LW4 560 aa36.56■■■■□ 3.44
CSNK1E-204ENST00000403904 ACCSQ96QU6 501 aa36.56■■■■□ 3.44
CSNK1E-204ENST00000403904 IFIH1Q9BYX4 1025 aaKnown RBP36.56■■■■□ 3.44
CSNK1E-204ENST00000403904 GTPBP4Q9BZE4 634 aaKnown RBP36.56■■■■□ 3.44
CSNK1E-204ENST00000403904 ERVK-5Q9HDB9 667 aa36.56■■■■□ 3.44
CSNK1E-204ENST00000403904 SYCE3A1L190 88 aa36.55■■■■□ 3.44
CSNK1E-204ENST00000403904 LETM1O95202 739 aaPredicted RBP36.55■■■■□ 3.44
CSNK1E-204ENST00000403904 CSF2RAP15509 400 aa36.55■■■■□ 3.44
CSNK1E-204ENST00000403904 PCBP1Q15365 356 aaKnown RBP eCLIP36.55■■■■□ 3.44
CSNK1E-204ENST00000403904 TMEM199Q8N511 208 aa36.55■■■■□ 3.44
CSNK1E-204ENST00000403904 BADQ92934 168 aa36.54■■■■□ 3.44
CSNK1E-204ENST00000403904 CPB2Q96IY4 423 aa36.54■■■■□ 3.44
CSNK1E-204ENST00000403904 TARS2Q9BW92 718 aaKnown RBP36.54■■■■□ 3.44
CSNK1E-204ENST00000403904 GZF1Q9H116 711 aaPredicted RBP36.54■■■■□ 3.44
CSNK1E-204ENST00000403904 ARF4P18085 180 aaPredicted RBP36.53■■■■□ 3.44
CSNK1E-204ENST00000403904 NLRP12P59046 1061 aa36.53■■■■□ 3.44
CSNK1E-204ENST00000403904 BMT2Q1RMZ1 405 aa36.53■■■■□ 3.44
CSNK1E-204ENST00000403904 BICD1Q96G01 975 aa36.53■■■■□ 3.44
CSNK1E-204ENST00000403904 MRPL4Q9BYD3 311 aaKnown RBP36.53■■■■□ 3.44
CSNK1E-204ENST00000403904 LTBP2Q14767 1821 aa36.53■■■■□ 3.44
CSNK1E-204ENST00000403904 UBE4BO95155 1302 aa36.53■■■■□ 3.44
CSNK1E-204ENST00000403904 CNTNAP2Q9UHC6 1331 aa36.53■■■■□ 3.44
CSNK1E-204ENST00000403904 CXCL10P02778 98 aa36.53■■■■□ 3.44
CSNK1E-204ENST00000403904 CD44P16070 742 aaKnown RBP36.53■■■■□ 3.44
CSNK1E-204ENST00000403904 HOXA11P31270 313 aaPredicted RBP36.53■■■■□ 3.44
CSNK1E-204ENST00000403904 RFC2P35250 354 aa36.53■■■■□ 3.44
CSNK1E-204ENST00000403904 PLEKHG4Q58EX7 1191 aa36.53■■■■□ 3.44
CSNK1E-204ENST00000403904 SYCP3Q8IZU3 236 aa36.53■■■■□ 3.44
CSNK1E-204ENST00000403904 GUF1Q8N442 669 aaKnown RBP36.53■■■■□ 3.44
CSNK1E-204ENST00000403904 AGPAT5Q9NUQ2 364 aa36.53■■■■□ 3.44
CSNK1E-204ENST00000403904 TMEM132AQ24JP5 1023 aa36.52■■■■□ 3.44
CSNK1E-204ENST00000403904 DPCR1Q3MIW9 517 aa36.52■■■■□ 3.44
CSNK1E-204ENST00000403904 DBF4BQ8NFT6 615 aa36.52■■■■□ 3.44
CSNK1E-204ENST00000403904 VWCEQ96DN2 955 aa36.52■■■■□ 3.44
CSNK1E-204ENST00000403904 TMEM206Q9H813 350 aa36.52■■■■□ 3.44
CSNK1E-204ENST00000403904 EXOC7Q9UPT5 735 aa36.52■■■■□ 3.44
CSNK1E-204ENST00000403904 PIN4Q9Y237 131 aaKnown RBP36.52■■■■□ 3.44
CSNK1E-204ENST00000403904 ZMYM2Q9UBW7 1377 aa36.51■■■■□ 3.44
CSNK1E-204ENST00000403904 HNRNPDLO14979 420 aaKnown RBP36.51■■■■□ 3.44
CSNK1E-204ENST00000403904 NCBP1Q09161 790 aaKnown RBP36.51■■■■□ 3.44
CSNK1E-204ENST00000403904 COBLL1Q53SF7 1204 aa36.51■■■■□ 3.44
CSNK1E-204ENST00000403904 CDR2LQ86X02 465 aaPredicted RBP36.51■■■■□ 3.44
CSNK1E-204ENST00000403904 ADSSL1Q8N142 457 aa36.51■■■■□ 3.44
CSNK1E-204ENST00000403904 ACO2Q99798 780 aaKnown RBP36.51■■■■□ 3.44
CSNK1E-204ENST00000403904 TMX1Q9H3N1 280 aa36.51■■■■□ 3.44
CSNK1E-204ENST00000403904 NR2E3Q9Y5X4 410 aa36.51■■■■□ 3.44
CSNK1E-204ENST00000403904 TNRC18O15417 2968 aaPredicted RBP36.51■■■■□ 3.43
CSNK1E-204ENST00000403904 PPP1R3GB7ZBB8 358 aa36.5■■■■□ 3.43
CSNK1E-204ENST00000403904 KIF20AO95235 890 aa36.5■■■■□ 3.43
CSNK1E-204ENST00000403904 KNOP1Q1ED39 458 aaKnown RBP36.5■■■■□ 3.43
CSNK1E-204ENST00000403904 TISP43B9A030 160 aa36.49■■■■□ 3.43
CSNK1E-204ENST00000403904 LIG4P49917 911 aa36.49■■■■□ 3.43
CSNK1E-204ENST00000403904 ATF7IP2Q5U623 682 aa36.49■■■■□ 3.43
CSNK1E-204ENST00000403904 TYRO3Q06418 890 aa36.49■■■■□ 3.43
CSNK1E-204ENST00000403904 STIM1Q13586 685 aa36.49■■■■□ 3.43
CSNK1E-204ENST00000403904 TCTN1Q2MV58 587 aa36.49■■■■□ 3.43
CSNK1E-204ENST00000403904 SLC39A4Q6P5W5 647 aa36.49■■■■□ 3.43
CSNK1E-204ENST00000403904 SEPT8Q92599 483 aa36.49■■■■□ 3.43
CSNK1E-204ENST00000403904 ANKRD63C9JTQ0 380 aa36.48■■■■□ 3.43
CSNK1E-204ENST00000403904 PIGRP01833 764 aa36.48■■■■□ 3.43
CSNK1E-204ENST00000403904 AXLP30530 894 aa36.48■■■■□ 3.43
CSNK1E-204ENST00000403904 RGS19P49795 217 aa36.48■■■■□ 3.43
CSNK1E-204ENST00000403904 KLHL10Q6JEL2 608 aa36.48■■■■□ 3.43
CSNK1E-204ENST00000403904 ZPBP2Q6X784 338 aa36.48■■■■□ 3.43
CSNK1E-204ENST00000403904 MLKLQ8NB16 471 aa36.48■■■■□ 3.43
CSNK1E-204ENST00000403904 ZBTB45Q96K62 511 aaPredicted RBP36.48■■■■□ 3.43
CSNK1E-204ENST00000403904 GBP3Q9H0R5 595 aa36.48■■■■□ 3.43
CSNK1E-204ENST00000403904 KCTD10Q9H3F6 313 aa36.48■■■■□ 3.43
CSNK1E-204ENST00000403904 A0A1B0GUA9 196 aa36.47■■■■□ 3.43
CSNK1E-204ENST00000403904 TGFB1I1O43294 461 aa36.47■■■■□ 3.43
CSNK1E-204ENST00000403904 NOTUMQ6P988 496 aa36.47■■■■□ 3.43
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms