RNA–Protein interactions for RNA: ENST00000403162.7

CCDC47-202, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC47, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-202ENST00000403162 MSH4O15457 936 aa21.43■■□□□ 1.02
CCDC47-202ENST00000403162 NUDT17P0C025 328 aa21.43■■□□□ 1.02
CCDC47-202ENST00000403162 EEF2P13639 858 aaKnown RBP21.43■■□□□ 1.02
CCDC47-202ENST00000403162 FMO5P49326 533 aa21.43■■□□□ 1.02
CCDC47-202ENST00000403162 DR1Q01658 176 aa21.43■■□□□ 1.02
CCDC47-202ENST00000403162 CYP4A11Q02928 519 aa21.43■■□□□ 1.02
CCDC47-202ENST00000403162 IFFO1Q0D2I5 559 aa21.43■■□□□ 1.02
CCDC47-202ENST00000403162 BYSLQ13895 437 aaKnown RBP21.43■■□□□ 1.02
CCDC47-202ENST00000403162 DRAP1Q14919 205 aaPredicted RBP21.43■■□□□ 1.02
CCDC47-202ENST00000403162 EIF2AK1Q9BQI3 630 aaKnown RBP21.43■■□□□ 1.02
CCDC47-202ENST00000403162 SLC40A1Q9NP59 571 aa21.43■■□□□ 1.02
CCDC47-202ENST00000403162 DNAJC12Q9UKB3 198 aa21.43■■□□□ 1.02
CCDC47-202ENST00000403162 ATP8A1Q9Y2Q0 1164 aa21.43■■□□□ 1.02
CCDC47-202ENST00000403162 GOLGA6L10A0A0M3HER8 536 aa21.43■■□□□ 1.02
CCDC47-202ENST00000403162 SPDYE3A6NKU9 549 aa21.43■■□□□ 1.02
CCDC47-202ENST00000403162 CCDC172P0C7W6 258 aa21.43■■□□□ 1.02
CCDC47-202ENST00000403162 DHX34Q14147 1143 aaKnown RBP21.43■■□□□ 1.02
CCDC47-202ENST00000403162 LACTB2Q53H82 288 aaPredicted RBP21.43■■□□□ 1.02
CCDC47-202ENST00000403162 ANKRD20A8PQ5CZ79 823 aa21.43■■□□□ 1.02
CCDC47-202ENST00000403162 RINT1Q6NUQ1 792 aa21.43■■□□□ 1.02
CCDC47-202ENST00000403162 DLK2Q6UY11 383 aa21.43■■□□□ 1.02
CCDC47-202ENST00000403162 MYCBPQ99417 103 aaPredicted RBP21.43■■□□□ 1.02
CCDC47-202ENST00000403162 GPR88Q9GZN0 384 aa21.43■■□□□ 1.02
CCDC47-202ENST00000403162 BCAS3Q9H6U6 928 aa21.43■■□□□ 1.02
CCDC47-202ENST00000403162 PHF20L1A8MW92 1017 aa21.42■■□□□ 1.02
CCDC47-202ENST00000403162 CHUKO15111 745 aa21.42■■□□□ 1.02
CCDC47-202ENST00000403162 CAP2P40123 477 aa21.42■■□□□ 1.02
CCDC47-202ENST00000403162 DRG2P55039 364 aaKnown RBP21.42■■□□□ 1.02
CCDC47-202ENST00000403162 ICA1Q05084 483 aa21.42■■□□□ 1.02
CCDC47-202ENST00000403162 SUPT20HL1Q3ZLR7 823 aa21.42■■□□□ 1.02
CCDC47-202ENST00000403162 CCDC114Q96M63 670 aa21.42■■□□□ 1.02
CCDC47-202ENST00000403162 RRAGCQ9HB90 399 aa21.42■■□□□ 1.02
CCDC47-202ENST00000403162 UBE4BO95155 1302 aa21.42■■□□□ 1.02
CCDC47-202ENST00000403162 DRD4P21917 467 aa21.41■■□□□ 1.02
CCDC47-202ENST00000403162 ERMARDQ5T6L9 678 aa21.41■■□□□ 1.02
CCDC47-202ENST00000403162 GKAP1Q5VSY0 366 aaPredicted RBP21.41■■□□□ 1.02
CCDC47-202ENST00000403162 TAX1BP1Q86VP1 789 aa21.41■■□□□ 1.02
CCDC47-202ENST00000403162 EPB41L4BQ9H329 900 aa21.41■■□□□ 1.02
CCDC47-202ENST00000403162 SLTMQ9NWH9 1034 aaKnown RBP eCLIP21.41■■□□□ 1.02
CCDC47-202ENST00000403162 ZBTB21Q9ULJ3 1066 aa21.41■■□□□ 1.02
CCDC47-202ENST00000403162 FAM13AO94988 1023 aa21.41■■□□□ 1.02
CCDC47-202ENST00000403162 HADHBP55084 474 aaKnown RBP21.41■■□□□ 1.02
CCDC47-202ENST00000403162 FBXO11Q86XK2 927 aa21.41■■□□□ 1.02
CCDC47-202ENST00000403162 ZNF341Q9BYN7 854 aa21.41■■□□□ 1.02
CCDC47-202ENST00000403162 TRIM31Q9BZY9 425 aa21.41■■□□□ 1.02
CCDC47-202ENST00000403162 LRRC4CQ9HCJ2 640 aa21.41■■□□□ 1.02
CCDC47-202ENST00000403162 CLEC11AQ9Y240 323 aa21.41■■□□□ 1.02
CCDC47-202ENST00000403162 ANKRD62A6NC57 917 aa21.4■■□□□ 1.02
CCDC47-202ENST00000403162 EML1O00423 815 aa21.4■■□□□ 1.02
CCDC47-202ENST00000403162 DNM1LO00429 736 aa21.4■■□□□ 1.02
CCDC47-202ENST00000403162 RAD21O60216 631 aa21.4■■□□□ 1.02
CCDC47-202ENST00000403162 CYP3A4P08684 503 aa21.4■■□□□ 1.02
CCDC47-202ENST00000403162 KLRC3Q07444 240 aa21.4■■□□□ 1.02
CCDC47-202ENST00000403162 ARHGEF26Q96DR7 871 aa21.4■■□□□ 1.02
CCDC47-202ENST00000403162 PGM2Q96G03 612 aa21.4■■□□□ 1.02
CCDC47-202ENST00000403162 XPO6Q96QU8 1125 aaKnown RBP21.4■■□□□ 1.02
CCDC47-202ENST00000403162 PABPC3Q9H361 631 aaKnown RBP21.4■■□□□ 1.02
CCDC47-202ENST00000403162 ERVK-5Q9HDB9 667 aa21.4■■□□□ 1.02
CCDC47-202ENST00000403162 CAND2O75155 1236 aa21.4■■□□□ 1.02
CCDC47-202ENST00000403162 ABCB4P21439 1286 aa21.4■■□□□ 1.02
CCDC47-202ENST00000403162 NMT1P30419 496 aaKnown RBP21.4■■□□□ 1.02
CCDC47-202ENST00000403162 PRPF4BQ13523 1007 aaKnown RBP21.4■■□□□ 1.02
CCDC47-202ENST00000403162 PPP2R5AQ15172 486 aa21.4■■□□□ 1.02
CCDC47-202ENST00000403162 KCTD19Q17RG1 926 aaPredicted RBP21.4■■□□□ 1.02
CCDC47-202ENST00000403162 C1orf186Q6ZWK4 172 aa21.4■■□□□ 1.02
CCDC47-202ENST00000403162 ZNF526Q8TF50 670 aaPredicted RBP21.4■■□□□ 1.02
CCDC47-202ENST00000403162 CHMP6Q96FZ7 201 aa21.4■■□□□ 1.02
CCDC47-202ENST00000403162 FAM129AQ9BZQ8 928 aa21.4■■□□□ 1.02
CCDC47-202ENST00000403162 INTS2Q9H0H0 1204 aaKnown RBP21.4■■□□□ 1.02
CCDC47-202ENST00000403162 TUFT1Q9NNX1 390 aa21.4■■□□□ 1.02
CCDC47-202ENST00000403162 DMAC2Q9NW81 257 aa21.4■■□□□ 1.02
CCDC47-202ENST00000403162 RGL1Q9NZL6 768 aa21.4■■□□□ 1.02
CCDC47-202ENST00000403162 APEX2Q9UBZ4 518 aa21.4■■□□□ 1.02
CCDC47-202ENST00000403162 FZD1Q9UP38 647 aa21.4■■□□□ 1.02
CCDC47-202ENST00000403162 PMS2P54278 862 aa21.39■■□□□ 1.01
CCDC47-202ENST00000403162 KIF22Q14807 665 aa21.39■■□□□ 1.01
CCDC47-202ENST00000403162 SPRED3Q2MJR0 410 aa21.39■■□□□ 1.01
CCDC47-202ENST00000403162 KIAA1755Q5JYT7 1200 aa21.39■■□□□ 1.01
CCDC47-202ENST00000403162 CPLX4Q7Z7G2 160 aa21.39■■□□□ 1.01
CCDC47-202ENST00000403162 JAMLQ86YT9 394 aa21.39■■□□□ 1.01
CCDC47-202ENST00000403162 SIAH1Q8IUQ4 282 aa21.39■■□□□ 1.01
CCDC47-202ENST00000403162 MYCT1Q8N699 235 aa21.39■■□□□ 1.01
CCDC47-202ENST00000403162 NEK9Q8TD19 979 aa21.39■■□□□ 1.01
CCDC47-202ENST00000403162 HSD17B14Q9BPX1 270 aa21.39■■□□□ 1.01
CCDC47-202ENST00000403162 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.39■■□□□ 1.01
CCDC47-202ENST00000403162 SEL1LQ9UBV2 794 aa21.39■■□□□ 1.01
CCDC47-202ENST00000403162 RASAL2Q9UJF2 1139 aa21.39■■□□□ 1.01
CCDC47-202ENST00000403162 SFI1A8K8P3 1242 aa21.38■■□□□ 1.01
CCDC47-202ENST00000403162 GHRP10912 638 aa21.38■■□□□ 1.01
CCDC47-202ENST00000403162 VCAM1P19320 739 aa21.38■■□□□ 1.01
CCDC47-202ENST00000403162 TNFAIP3P21580 790 aa21.38■■□□□ 1.01
CCDC47-202ENST00000403162 RFX1P22670 979 aa21.38■■□□□ 1.01
CCDC47-202ENST00000403162 MAPK7Q13164 816 aa21.38■■□□□ 1.01
CCDC47-202ENST00000403162 PRKG1Q13976 671 aa21.38■■□□□ 1.01
CCDC47-202ENST00000403162 CBWD6Q4V339 395 aa21.38■■□□□ 1.01
CCDC47-202ENST00000403162 CBWD3Q5JTY5 395 aa21.38■■□□□ 1.01
CCDC47-202ENST00000403162 CBWD5Q5RIA9 395 aa21.38■■□□□ 1.01
CCDC47-202ENST00000403162 RHOT2Q8IXI1 618 aa21.38■■□□□ 1.01
CCDC47-202ENST00000403162 THAP2Q9H0W7 228 aa21.38■■□□□ 1.01
CCDC47-202ENST00000403162 IKZF4Q9H2S9 585 aa21.38■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms