RNA–Protein interactions for RNA: ENST00000400772.6

ATG4B-203, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 625 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-203ENST00000400772 RSPH1Q8WYR4 309 aa17.6■□□□□ 0.41
ATG4B-203ENST00000400772 PGBD4Q96DM1 585 aa17.6■□□□□ 0.41
ATG4B-203ENST00000400772 BACH2Q9BYV9 841 aa17.6■□□□□ 0.41
ATG4B-203ENST00000400772 RNF39Q9H2S5 420 aa17.6■□□□□ 0.41
ATG4B-203ENST00000400772 CLEC1BQ9P126 229 aa17.6■□□□□ 0.41
ATG4B-203ENST00000400772 SMC3Q9UQE7 1217 aa17.6■□□□□ 0.41
ATG4B-203ENST00000400772 INPP5FQ9Y2H2 1132 aa17.6■□□□□ 0.41
ATG4B-203ENST00000400772 NCOR1O75376 2440 aa17.59■□□□□ 0.41
ATG4B-203ENST00000400772 PP2D1A8MPX8 630 aa17.59■□□□□ 0.41
ATG4B-203ENST00000400772 B4GALT5O43286 388 aa17.59■□□□□ 0.41
ATG4B-203ENST00000400772 GLP2RO95838 553 aa17.59■□□□□ 0.41
ATG4B-203ENST00000400772 ARF4P18085 180 aaPredicted RBP17.59■□□□□ 0.41
ATG4B-203ENST00000400772 CYP11B2P19099 503 aa17.59■□□□□ 0.41
ATG4B-203ENST00000400772 PPM1AP35813 382 aa17.59■□□□□ 0.41
ATG4B-203ENST00000400772 PRPHP41219 470 aa17.59■□□□□ 0.41
ATG4B-203ENST00000400772 CLUL1Q15846 466 aa17.59■□□□□ 0.41
ATG4B-203ENST00000400772 RILPL1Q5EBL4 403 aa17.59■□□□□ 0.41
ATG4B-203ENST00000400772 HAUS3Q68CZ6 603 aa17.59■□□□□ 0.41
ATG4B-203ENST00000400772 PDE12Q6L8Q7 609 aaKnown RBP17.59■□□□□ 0.41
ATG4B-203ENST00000400772 TMEM173Q86WV6 379 aaPredicted RBP17.59■□□□□ 0.41
ATG4B-203ENST00000400772 ZNF280BQ86YH2 543 aa17.59■□□□□ 0.41
ATG4B-203ENST00000400772 MCPH1Q8NEM0 835 aa17.59■□□□□ 0.41
ATG4B-203ENST00000400772 VN1R2Q8NFZ6 395 aa17.59■□□□□ 0.41
ATG4B-203ENST00000400772 BSNDQ8WZ55 320 aa17.59■□□□□ 0.41
ATG4B-203ENST00000400772 PPP2R3CQ969Q6 453 aa17.59■□□□□ 0.41
ATG4B-203ENST00000400772 MSLNLQ96KJ4 702 aa17.59■□□□□ 0.41
ATG4B-203ENST00000400772 TLE6Q9H808 572 aa17.59■□□□□ 0.41
ATG4B-203ENST00000400772 PUF60Q9UHX1 559 aaKnown RBP17.59■□□□□ 0.41
ATG4B-203ENST00000400772 KIAA1024Q9UPX6 916 aa17.59■□□□□ 0.41
ATG4B-203ENST00000400772 IPPQ9Y573 584 aa17.59■□□□□ 0.41
ATG4B-203ENST00000400772 ARHGEF35A5YM69 484 aa17.58■□□□□ 0.4
ATG4B-203ENST00000400772 HIDE1A8MVS5 230 aa17.58■□□□□ 0.4
ATG4B-203ENST00000400772 H3BQV1 296 aa17.58■□□□□ 0.4
ATG4B-203ENST00000400772 LAD1O00515 517 aa17.58■□□□□ 0.4
ATG4B-203ENST00000400772 GALTP07902 379 aa17.58■□□□□ 0.4
ATG4B-203ENST00000400772 CDC25AP30304 524 aa17.58■□□□□ 0.4
ATG4B-203ENST00000400772 ALDH7A1P49419 539 aaKnown RBP17.58■□□□□ 0.4
ATG4B-203ENST00000400772 RBM10P98175 930 aaKnown RBP17.58■□□□□ 0.4
ATG4B-203ENST00000400772 KRT17Q04695 432 aa17.58■□□□□ 0.4
ATG4B-203ENST00000400772 CUL4AQ13619 759 aa17.58■□□□□ 0.4
ATG4B-203ENST00000400772 DUSP6Q16828 381 aa17.58■□□□□ 0.4
ATG4B-203ENST00000400772 PLPP4Q5VZY2 271 aa17.58■□□□□ 0.4
ATG4B-203ENST00000400772 CDCA2Q69YH5 1023 aaPredicted RBP17.58■□□□□ 0.4
ATG4B-203ENST00000400772 NOTUMQ6P988 496 aa17.58■□□□□ 0.4
ATG4B-203ENST00000400772 CCDC51Q96ER9 411 aa17.58■□□□□ 0.4
ATG4B-203ENST00000400772 TCF25Q9BQ70 676 aa17.58■□□□□ 0.4
ATG4B-203ENST00000400772 MMTAG2Q9BU76 263 aaKnown RBP17.58■□□□□ 0.4
ATG4B-203ENST00000400772 CSRNP2Q9H175 543 aa17.58■□□□□ 0.4
ATG4B-203ENST00000400772 BHMT2Q9H2M3 363 aa17.58■□□□□ 0.4
ATG4B-203ENST00000400772 RSAD1Q9HA92 442 aa17.58■□□□□ 0.4
ATG4B-203ENST00000400772 POLD4Q9HCU8 107 aa17.58■□□□□ 0.4
ATG4B-203ENST00000400772 DNAJB4Q9UDY4 337 aa17.58■□□□□ 0.4
ATG4B-203ENST00000400772 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.58■□□□□ 0.4
ATG4B-203ENST00000400772 CNTNAP2Q9UHC6 1331 aa17.57■□□□□ 0.4
ATG4B-203ENST00000400772 LRRIQ4A6NIV6 560 aa17.57■□□□□ 0.4
ATG4B-203ENST00000400772 MBTPS2O43462 519 aa17.57■□□□□ 0.4
ATG4B-203ENST00000400772 ZC3H11AO75152 810 aaKnown RBP eCLIP17.57■□□□□ 0.4
ATG4B-203ENST00000400772 DDHD2O94830 711 aa17.57■□□□□ 0.4
ATG4B-203ENST00000400772 ATP2C1P98194 919 aaPredicted RBP17.57■□□□□ 0.4
ATG4B-203ENST00000400772 KCNC3Q14003 757 aa17.57■□□□□ 0.4
ATG4B-203ENST00000400772 LARP1BQ659C4 914 aaKnown RBP17.57■□□□□ 0.4
ATG4B-203ENST00000400772 DTHD1Q6ZMT9 781 aa17.57■□□□□ 0.4
ATG4B-203ENST00000400772 CNNM3Q8NE01 707 aa17.57■□□□□ 0.4
ATG4B-203ENST00000400772 SNX29Q8TEQ0 813 aa17.57■□□□□ 0.4
ATG4B-203ENST00000400772 BCL7CQ8WUZ0 217 aaPredicted RBP17.57■□□□□ 0.4
ATG4B-203ENST00000400772 KHSRPQ92945 711 aaKnown RBP eCLIP17.57■□□□□ 0.43e-7■■□□□ 12.3
ATG4B-203ENST00000400772 FZD8Q9H461 694 aa17.57■□□□□ 0.4
ATG4B-203ENST00000400772 NGRNQ9NPE2 291 aaKnown RBP17.57■□□□□ 0.4
ATG4B-203ENST00000400772 DDX19AQ9NUU7 478 aaKnown RBP17.57■□□□□ 0.4
ATG4B-203ENST00000400772 HES2Q9Y543 173 aa17.57■□□□□ 0.4
ATG4B-203ENST00000400772 STK24Q9Y6E0 443 aa17.57■□□□□ 0.4
ATG4B-203ENST00000400772 A0A1B0GUA9 196 aa17.56■□□□□ 0.4
ATG4B-203ENST00000400772 TTLL13PA6NNM8 815 aa17.56■□□□□ 0.4
ATG4B-203ENST00000400772 E9PMD0 336 aa17.56■□□□□ 0.4
ATG4B-203ENST00000400772 EYA4O95677 639 aa17.56■□□□□ 0.4
ATG4B-203ENST00000400772 POMCP01189 267 aa17.56■□□□□ 0.4
ATG4B-203ENST00000400772 ITGA4P13612 1032 aa17.56■□□□□ 0.4
ATG4B-203ENST00000400772 SLC11A1P49279 550 aa17.56■□□□□ 0.4
ATG4B-203ENST00000400772 NDUFV1P49821 464 aa17.56■□□□□ 0.4
ATG4B-203ENST00000400772 NCBP1Q09161 790 aaKnown RBP17.56■□□□□ 0.4
ATG4B-203ENST00000400772 COASYQ13057 564 aa17.56■□□□□ 0.4
ATG4B-203ENST00000400772 SMAD2Q15796 467 aaKnown RBP17.56■□□□□ 0.4
ATG4B-203ENST00000400772 PPP4R3CPQ6ZMV5 832 aa17.56■□□□□ 0.4
ATG4B-203ENST00000400772 CDR2LQ86X02 465 aaPredicted RBP17.56■□□□□ 0.4
ATG4B-203ENST00000400772 IGSF21Q96ID5 467 aa17.56■□□□□ 0.4
ATG4B-203ENST00000400772 CDCA3Q99618 268 aaPredicted RBP17.56■□□□□ 0.4
ATG4B-203ENST00000400772 RAB34Q9BZG1 259 aa17.56■□□□□ 0.4
ATG4B-203ENST00000400772 ENTPD7Q9NQZ7 604 aa17.56■□□□□ 0.4
ATG4B-203ENST00000400772 MIOSQ9NXC5 875 aa17.56■□□□□ 0.4
ATG4B-203ENST00000400772 CD207Q9UJ71 328 aa17.56■□□□□ 0.4
ATG4B-203ENST00000400772 BARX2Q9UMQ3 279 aaPredicted RBP17.56■□□□□ 0.4
ATG4B-203ENST00000400772 INPPL1O15357 1258 aa17.55■□□□□ 0.4
ATG4B-203ENST00000400772 RNASELQ05823 741 aaKnown RBP17.55■□□□□ 0.4
ATG4B-203ENST00000400772 SMAD4Q13485 552 aaKnown RBP17.55■□□□□ 0.4
ATG4B-203ENST00000400772 FAM187BQ17R55 369 aa17.55■□□□□ 0.4
ATG4B-203ENST00000400772 KRT79Q5XKE5 535 aa17.55■□□□□ 0.4
ATG4B-203ENST00000400772 TMC7Q7Z402 723 aa17.55■□□□□ 0.4
ATG4B-203ENST00000400772 KCNK18Q7Z418 384 aa17.55■□□□□ 0.4
ATG4B-203ENST00000400772 GJD3Q8N144 294 aa17.55■□□□□ 0.4
ATG4B-203ENST00000400772 MRPL43Q8N983 215 aaKnown RBP17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms